RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 FAM25EA8MYX2 175 aa6.28□□□□□ -1.4
ZNF558-202ENST00000593891 NHLH2Q02577 135 aa6.28□□□□□ -1.4
ZNF558-202ENST00000593891 Q6ZNX1 250 aa6.28□□□□□ -1.4
ZNF558-202ENST00000593891 PACRGQ96M98 296 aaPredicted RBP6.28□□□□□ -1.4
ZNF558-202ENST00000593891 RBM38Q9H0Z9 239 aaKnown RBP6.28□□□□□ -1.4
ZNF558-202ENST00000593891 RAB26Q9ULW5 256 aa6.28□□□□□ -1.4
ZNF558-202ENST00000593891 NDUFC2-KCTD14E9PQ53 114 aa6.27□□□□□ -1.41
ZNF558-202ENST00000593891 HMGB3O15347 200 aaKnown RBP6.27□□□□□ -1.41
ZNF558-202ENST00000593891 MT2AP02795 61 aa6.27□□□□□ -1.41
ZNF558-202ENST00000593891 ARL14EPLP0DKL9 152 aa6.27□□□□□ -1.41
ZNF558-202ENST00000593891 KRTAP13-1Q8IUC0 172 aa6.27□□□□□ -1.41
ZNF558-202ENST00000593891 TOMM5Q8N4H5 51 aa6.27□□□□□ -1.41
ZNF558-202ENST00000593891 ORAOV1Q8WV07 137 aa6.27□□□□□ -1.41
ZNF558-202ENST00000593891 CYTL1Q9NRR1 136 aa6.27□□□□□ -1.41
ZNF558-202ENST00000593891 CDC42SE2Q9NRR3 84 aa6.27□□□□□ -1.41
ZNF558-202ENST00000593891 CXCL1P09341 107 aa6.26□□□□□ -1.41
ZNF558-202ENST00000593891 MRPL55Q7Z7F7 128 aaKnown RBP6.26□□□□□ -1.41
ZNF558-202ENST00000593891 Q8NBF4 154 aa6.26□□□□□ -1.41
ZNF558-202ENST00000593891 SLC25A20O43772 301 aa6.25□□□□□ -1.41
ZNF558-202ENST00000593891 Q8N377 158 aa6.24□□□□□ -1.41
ZNF558-202ENST00000593891 MARVELD1Q9BSK0 173 aa6.24□□□□□ -1.41
ZNF558-202ENST00000593891 TP73-AS1Q9UF72 201 aa6.24□□□□□ -1.41
ZNF558-202ENST00000593891 LYZL1Q6UWQ5 148 aa6.23□□□□□ -1.41
ZNF558-202ENST00000593891 FUNDC2Q9BWH2 189 aa6.23□□□□□ -1.41
ZNF558-202ENST00000593891 VCX3AQ9NNX9 186 aa6.23□□□□□ -1.41
ZNF558-202ENST00000593891 RPL37AP8A6NKH3 93 aa6.22□□□□□ -1.41
ZNF558-202ENST00000593891 PEX7O00628 323 aa6.22□□□□□ -1.41
ZNF558-202ENST00000593891 NDUFB6O95139 128 aa6.22□□□□□ -1.41
ZNF558-202ENST00000593891 GCHFRP30047 84 aa6.22□□□□□ -1.41
ZNF558-202ENST00000593891 KRTAP10-10P60014 251 aa6.22□□□□□ -1.41
ZNF558-202ENST00000593891 SCGB1C1Q8TD33 95 aa6.22□□□□□ -1.41
ZNF558-202ENST00000593891 DEDD2Q8WXF8 326 aa6.22□□□□□ -1.41
ZNF558-202ENST00000593891 TRBV30A0A0K0K1B3 111 aa6.21□□□□□ -1.42
ZNF558-202ENST00000593891 MT1FP04733 61 aa6.21□□□□□ -1.42
ZNF558-202ENST00000593891 UBE2G2P60604 165 aa6.21□□□□□ -1.42
ZNF558-202ENST00000593891 RPS29P62273 56 aaKnown RBP6.21□□□□□ -1.42
ZNF558-202ENST00000593891 RAB32Q13637 225 aa6.21□□□□□ -1.42
ZNF558-202ENST00000593891 TMEM167BQ9NRX6 74 aa6.21□□□□□ -1.42
ZNF558-202ENST00000593891 TRAV13-1A0A0B4J241 112 aa6.2□□□□□ -1.42
ZNF558-202ENST00000593891 STAG3L2P0CL84 134 aa6.2□□□□□ -1.42
ZNF558-202ENST00000593891 STAG3L3P0CL85 134 aa6.2□□□□□ -1.42
ZNF558-202ENST00000593891 UBE2G1P62253 170 aa6.2□□□□□ -1.42
ZNF558-202ENST00000593891 RPS20P60866 119 aaKnown RBP6.19□□□□□ -1.42
ZNF558-202ENST00000593891 MRPL52Q86TS9 123 aaKnown RBP6.19□□□□□ -1.42
ZNF558-202ENST00000593891 HIST1H2BAQ96A08 127 aa6.19□□□□□ -1.42
ZNF558-202ENST00000593891 PLEKHB2Q96CS7 222 aa6.19□□□□□ -1.42
ZNF558-202ENST00000593891 MRAP2Q96G30 205 aa6.19□□□□□ -1.42
ZNF558-202ENST00000593891 FMC1Q96HJ9 113 aa6.19□□□□□ -1.42
ZNF558-202ENST00000593891 LINC00167Q96N53 147 aa6.19□□□□□ -1.42
ZNF558-202ENST00000593891 Q9H521 79 aa6.19□□□□□ -1.42
ZNF558-202ENST00000593891 A0A1W2PRE2 83 aa6.18□□□□□ -1.42
ZNF558-202ENST00000593891 LGALS3P17931 250 aaKnown RBP6.18□□□□□ -1.42
ZNF558-202ENST00000593891 CDC34P49427 236 aaPredicted RBP6.18□□□□□ -1.42
ZNF558-202ENST00000593891 C9orf92A6NGG3 77 aa6.17□□□□□ -1.42
ZNF558-202ENST00000593891 PMCHP20382 165 aa6.17□□□□□ -1.42
ZNF558-202ENST00000593891 LINC00469Q8N7U9 141 aa6.17□□□□□ -1.42
ZNF558-202ENST00000593891 TPPP3Q9BW30 176 aa6.17□□□□□ -1.42
ZNF558-202ENST00000593891 ZNF727A8MUV8 499 aa6.16□□□□□ -1.42
ZNF558-202ENST00000593891 UPK1BO75841 260 aa6.16□□□□□ -1.42
ZNF558-202ENST00000593891 LTAP01374 205 aa6.16□□□□□ -1.42
ZNF558-202ENST00000593891 TRGC1P0CF51 173 aa6.16□□□□□ -1.42
ZNF558-202ENST00000593891 PRLHP81277 87 aa6.16□□□□□ -1.42
ZNF558-202ENST00000593891 XAGE1AQ9HD64 81 aa6.16□□□□□ -1.42
ZNF558-202ENST00000593891 GAGE10A6NGK3 116 aa6.15□□□□□ -1.42
ZNF558-202ENST00000593891 I3L3M4 83 aa6.15□□□□□ -1.42
ZNF558-202ENST00000593891 CXorf1O96002 111 aa6.15□□□□□ -1.42
ZNF558-202ENST00000593891 CCDC32Q9BV29 185 aa6.15□□□□□ -1.42
ZNF558-202ENST00000593891 GNB1LQ9BYB4 327 aa6.15□□□□□ -1.42
ZNF558-202ENST00000593891 SDHAF1A6NFY7 115 aa6.14□□□□□ -1.43
ZNF558-202ENST00000593891 PNRC1Q12796 327 aaPredicted RBP6.14□□□□□ -1.43
ZNF558-202ENST00000593891 IL15RAQ13261 267 aa6.14□□□□□ -1.43
ZNF558-202ENST00000593891 PYDC2Q56P42 97 aa6.14□□□□□ -1.43
ZNF558-202ENST00000593891 GATD1Q8NB37 220 aa6.14□□□□□ -1.43
ZNF558-202ENST00000593891 RAB24Q969Q5 203 aa6.14□□□□□ -1.43
ZNF558-202ENST00000593891 MDN1Q9NU22 5596 aa6.14□□□□□ -1.43
ZNF558-202ENST00000593891 FOXA3P55318 350 aaPredicted RBP6.13□□□□□ -1.43
ZNF558-202ENST00000593891 RNASE13Q5GAN3 156 aaKnown RBP6.13□□□□□ -1.43
ZNF558-202ENST00000593891 FAM19A1Q7Z5A9 133 aa6.13□□□□□ -1.43
ZNF558-202ENST00000593891 NKX6-2Q9C056 277 aaPredicted RBP6.13□□□□□ -1.43
ZNF558-202ENST00000593891 MZT2BQ6NZ67 158 aa6.12□□□□□ -1.43
ZNF558-202ENST00000593891 C2orf82Q6UX34 121 aa6.12□□□□□ -1.43
ZNF558-202ENST00000593891 CBLN2Q8IUK8 224 aa6.12□□□□□ -1.43
ZNF558-202ENST00000593891 A0A087WXM4 84 aa6.11□□□□□ -1.43
ZNF558-202ENST00000593891 RPL32P62910 135 aaKnown RBP6.11□□□□□ -1.43
ZNF558-202ENST00000593891 SMAGPQ0VAQ4 97 aa6.11□□□□□ -1.43
ZNF558-202ENST00000593891 KIAA0087Q14695 138 aa6.11□□□□□ -1.43
ZNF558-202ENST00000593891 RPL39LQ96EH5 51 aaKnown RBP6.11□□□□□ -1.43
ZNF558-202ENST00000593891 FAM210AQ96ND0 272 aa6.11□□□□□ -1.43
ZNF558-202ENST00000593891 IGHV3OR16-9A0A0B4J2B5 98 aa6.1□□□□□ -1.43
ZNF558-202ENST00000593891 NAP1L6A6NFF2 107 aa6.1□□□□□ -1.43
ZNF558-202ENST00000593891 SPRR4Q96PI1 79 aa6.1□□□□□ -1.43
ZNF558-202ENST00000593891 CSDC2Q9Y534 153 aaKnown RBP6.1□□□□□ -1.43
ZNF558-202ENST00000593891 C7orf77A4D0Y5 90 aa6.09□□□□□ -1.43
ZNF558-202ENST00000593891 ZNF706Q9Y5V0 76 aaPredicted RBP6.09□□□□□ -1.43
ZNF558-202ENST00000593891 KRTAP2-2Q9BYT5 123 aa6.08□□□□□ -1.44
ZNF558-202ENST00000593891 KRTAP2-1Q9BYU5 128 aa6.08□□□□□ -1.44
ZNF558-202ENST00000593891 SMIM3Q9BZL3 60 aa6.08□□□□□ -1.44
ZNF558-202ENST00000593891 GEMIN7Q9H840 131 aaKnown RBP6.08□□□□□ -1.44
ZNF558-202ENST00000593891 TMEM242Q9NWH2 141 aa6.08□□□□□ -1.44
ZNF558-202ENST00000593891 F2Z2F3 143 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms