RNA–Protein interactions for RNA: ENST00000593330.1

SOX2-OT-219, SOX2 overlapping transcript, humanhuman

TSL 3

Gene SOX2-OT, Length 468 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-219ENST00000593330 SNRPGP15A8MWD9 76 aa2.38□□□□□ -2.03
SOX2-OT-219ENST00000593330 GLI2P10070 1586 aa2.38□□□□□ -2.03
SOX2-OT-219ENST00000593330 KLKP1Q107X0 134 aa2.38□□□□□ -2.03
SOX2-OT-219ENST00000593330 ZNF56Q15929 161 aa2.38□□□□□ -2.03
SOX2-OT-219ENST00000593330 DEFB132Q7Z7B7 95 aa2.38□□□□□ -2.03
SOX2-OT-219ENST00000593330 FXYD6Q9H0Q3 95 aa2.38□□□□□ -2.03
SOX2-OT-219ENST00000593330 CDC42SE2Q9NRR3 84 aa2.38□□□□□ -2.03
SOX2-OT-219ENST00000593330 KIAA0100Q14667 2235 aaKnown RBP2.38□□□□□ -2.03
SOX2-OT-219ENST00000593330 UNC13CQ8NB66 2214 aa2.38□□□□□ -2.03
SOX2-OT-219ENST00000593330 ZGRF1Q86YA3 2104 aa2.38□□□□□ -2.03
SOX2-OT-219ENST00000593330 SHROOM3Q8TF72 1996 aa2.38□□□□□ -2.03
SOX2-OT-219ENST00000593330 DOCK2Q92608 1830 aa2.38□□□□□ -2.03
SOX2-OT-219ENST00000593330 ABCC1P33527 1531 aa2.37□□□□□ -2.03
SOX2-OT-219ENST00000593330 HIGD1CA8MV81 97 aa2.37□□□□□ -2.03
SOX2-OT-219ENST00000593330 SNRPFP62306 86 aaKnown RBP2.37□□□□□ -2.03
SOX2-OT-219ENST00000593330 CFAP126Q5VTH2 177 aa2.37□□□□□ -2.03
SOX2-OT-219ENST00000593330 HCP5Q6MZN7 132 aa2.37□□□□□ -2.03
SOX2-OT-219ENST00000593330 Q6ZRN7 208 aaPredicted RBP2.37□□□□□ -2.03
SOX2-OT-219ENST00000593330 CRCT1Q9UGL9 99 aa2.37□□□□□ -2.03
SOX2-OT-219ENST00000593330 KLK9Q9UKQ9 250 aa2.37□□□□□ -2.03
SOX2-OT-219ENST00000593330 MAP3K4Q9Y6R4 1608 aa2.37□□□□□ -2.03
SOX2-OT-219ENST00000593330 NKTRP30414 1462 aaKnown RBP2.37□□□□□ -2.03
SOX2-OT-219ENST00000593330 C1orf167Q5SNV9 1468 aa2.37□□□□□ -2.03
SOX2-OT-219ENST00000593330 CLTCQ00610 1675 aaKnown RBP2.37□□□□□ -2.03
SOX2-OT-219ENST00000593330 CFAP43Q8NDM7 1665 aa2.37□□□□□ -2.03
SOX2-OT-219ENST00000593330 MYO3AQ8NEV4 1616 aa2.36□□□□□ -2.03
SOX2-OT-219ENST00000593330 BIVM-ERCC5R4GMW8 1640 aa2.36□□□□□ -2.03
SOX2-OT-219ENST00000593330 CHKB-CPT1BH3BT56 60 aa2.36□□□□□ -2.03
SOX2-OT-219ENST00000593330 BCE1O60756 84 aa2.36□□□□□ -2.03
SOX2-OT-219ENST00000593330 C20orf197Q8N268 126 aa2.36□□□□□ -2.03
SOX2-OT-219ENST00000593330 LINC00304Q8N9R0 145 aa2.36□□□□□ -2.03
SOX2-OT-219ENST00000593330 TXNDC17Q9BRA2 123 aa2.36□□□□□ -2.03
SOX2-OT-219ENST00000593330 NDUFA4L2Q9NRX3 87 aa2.36□□□□□ -2.03
SOX2-OT-219ENST00000593330 ABCC6O95255 1503 aa2.36□□□□□ -2.03
SOX2-OT-219ENST00000593330 ADGRB2O60241 1585 aa2.36□□□□□ -2.03
SOX2-OT-219ENST00000593330 RGPD1P0DJD0 1748 aa2.35□□□□□ -2.03
SOX2-OT-219ENST00000593330 XRN1Q8IZH2 1706 aaKnown RBP2.35□□□□□ -2.03
SOX2-OT-219ENST00000593330 NRXN2Q9P2S2 1712 aa2.35□□□□□ -2.03
SOX2-OT-219ENST00000593330 TRBV6-7A0A0A0MS04 114 aa2.35□□□□□ -2.03
SOX2-OT-219ENST00000593330 IGKV3D-7A0A0C4DH55 119 aa2.35□□□□□ -2.03
SOX2-OT-219ENST00000593330 IGKV3OR2-268A0A0C4DH90 116 aa2.35□□□□□ -2.03
SOX2-OT-219ENST00000593330 A0A0D9SFI3 127 aa2.35□□□□□ -2.03
SOX2-OT-219ENST00000593330 C10orf142B7Z368 130 aa2.35□□□□□ -2.03
SOX2-OT-219ENST00000593330 INE1O15225 51 aa2.35□□□□□ -2.03
SOX2-OT-219ENST00000593330 IGLV3-19P01714 112 aa2.35□□□□□ -2.03
SOX2-OT-219ENST00000593330 ACYP1P07311 99 aa2.35□□□□□ -2.03
SOX2-OT-219ENST00000593330 EFNA4P52798 201 aa2.35□□□□□ -2.03
SOX2-OT-219ENST00000593330 EDDM3BP56851 147 aa2.35□□□□□ -2.03
SOX2-OT-219ENST00000593330 ELOF1P60002 83 aaKnown RBP2.35□□□□□ -2.03
SOX2-OT-219ENST00000593330 FAM223AQ8IWN6 122 aa2.35□□□□□ -2.03
SOX2-OT-219ENST00000593330 RGPD2P0DJD1 1756 aa2.35□□□□□ -2.03
SOX2-OT-219ENST00000593330 KDM3BQ7LBC6 1761 aa2.35□□□□□ -2.03
SOX2-OT-219ENST00000593330 DLEC1Q9Y238 1755 aa2.35□□□□□ -2.03
SOX2-OT-219ENST00000593330 UGGT1Q9NYU2 1555 aa2.35□□□□□ -2.03
SOX2-OT-219ENST00000593330 TOP2BQ02880 1626 aa2.35□□□□□ -2.03
SOX2-OT-219ENST00000593330 ITSN1Q15811 1721 aa2.34□□□□□ -2.03
SOX2-OT-219ENST00000593330 UBR1Q8IWV7 1749 aa2.34□□□□□ -2.03
SOX2-OT-219ENST00000593330 RALGAPBQ86X10 1494 aa2.34□□□□□ -2.03
SOX2-OT-219ENST00000593330 NBDYA0A0U1RRE5 68 aa2.34□□□□□ -2.03
SOX2-OT-219ENST00000593330 LOC101927531A0A1B0GV80 90 aa2.34□□□□□ -2.03
SOX2-OT-219ENST00000593330 TMEM14DPA8MWL7 114 aa2.34□□□□□ -2.03
SOX2-OT-219ENST00000593330 F2Z2F3 143 aa2.34□□□□□ -2.03
SOX2-OT-219ENST00000593330 M0R2N4 97 aa2.34□□□□□ -2.03
SOX2-OT-219ENST00000593330 COX6CP09669 75 aa2.34□□□□□ -2.03
SOX2-OT-219ENST00000593330 COX8AP10176 69 aa2.34□□□□□ -2.03
SOX2-OT-219ENST00000593330 CCL3L1P16619 93 aa2.34□□□□□ -2.03
SOX2-OT-219ENST00000593330 SMIM11AP58511 58 aa2.34□□□□□ -2.03
SOX2-OT-219ENST00000593330 SSBP1Q04837 148 aaKnown RBP2.34□□□□□ -2.03
SOX2-OT-219ENST00000593330 TMEM170BQ5T4T1 132 aa2.34□□□□□ -2.03
SOX2-OT-219ENST00000593330 LINC00643Q86TS7 51 aa2.34□□□□□ -2.03
SOX2-OT-219ENST00000593330 COA5Q86WW8 74 aa2.34□□□□□ -2.03
SOX2-OT-219ENST00000593330 DEFB107AQ8IZN7 70 aa2.34□□□□□ -2.03
SOX2-OT-219ENST00000593330 WFDC10AQ9H1F0 79 aa2.34□□□□□ -2.03
SOX2-OT-219ENST00000593330 DYNLRB1Q9NP97 96 aa2.34□□□□□ -2.03
SOX2-OT-219ENST00000593330 LENEPQ9Y5L5 61 aa2.34□□□□□ -2.03
SOX2-OT-219ENST00000593330 ARFGEF3Q5TH69 2177 aa2.34□□□□□ -2.04
SOX2-OT-219ENST00000593330 BAZ2BQ9UIF8 2168 aaKnown RBP2.34□□□□□ -2.04
SOX2-OT-219ENST00000593330 EXPH5Q8NEV8 1989 aa2.34□□□□□ -2.04
SOX2-OT-219ENST00000593330 RGPD8O14715 1765 aaPredicted RBP2.33□□□□□ -2.04
SOX2-OT-219ENST00000593330 RGPD5Q99666 1765 aa2.33□□□□□ -2.04
SOX2-OT-219ENST00000593330 ARFGEF2Q9Y6D5 1785 aa2.33□□□□□ -2.04
SOX2-OT-219ENST00000593330 KCPQ6ZWJ8 1503 aa2.33□□□□□ -2.04
SOX2-OT-219ENST00000593330 PDCD11Q14690 1871 aaKnown RBP2.33□□□□□ -2.04
SOX2-OT-219ENST00000593330 IQGAP2Q13576 1575 aa2.33□□□□□ -2.04
SOX2-OT-219ENST00000593330 KIAA0556O60303 1618 aa2.33□□□□□ -2.04
SOX2-OT-219ENST00000593330 LRRC37A3O60309 1634 aa2.33□□□□□ -2.04
SOX2-OT-219ENST00000593330 TRBV25-1A0A075B6N4 114 aa2.33□□□□□ -2.04
SOX2-OT-219ENST00000593330 TRBV6-5A0A0K0K1A5 114 aa2.33□□□□□ -2.04
SOX2-OT-219ENST00000593330 HMGN4O00479 90 aa2.33□□□□□ -2.04
SOX2-OT-219ENST00000593330 C3orf79P0CE67 100 aa2.33□□□□□ -2.04
SOX2-OT-219ENST00000593330 PSMG4Q5JS54 123 aa2.33□□□□□ -2.04
SOX2-OT-219ENST00000593330 IFT172Q9UG01 1749 aa2.33□□□□□ -2.04
SOX2-OT-219ENST00000593330 PLXNA1Q9UIW2 1896 aa2.33□□□□□ -2.04
SOX2-OT-219ENST00000593330 ASXL1Q8IXJ9 1541 aa2.32□□□□□ -2.04
SOX2-OT-219ENST00000593330 MYOM1P52179 1685 aa2.32□□□□□ -2.04
SOX2-OT-219ENST00000593330 SETXQ7Z333 2677 aaKnown RBP2.32□□□□□ -2.04
SOX2-OT-219ENST00000593330 SIPA1L3O60292 1781 aaPredicted RBP2.32□□□□□ -2.04
SOX2-OT-219ENST00000593330 IGKV1-17P01599 117 aa2.32□□□□□ -2.04
SOX2-OT-219ENST00000593330 SFTA2Q6UW10 78 aa2.32□□□□□ -2.04
SOX2-OT-219ENST00000593330 LINC00322Q6ZN03 302 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms