RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 NTM-AS1Q6ZSK4 140 aa8.43□□□□□ -1.06
NPC1-214ENST00000593280 MAPKAPK5-AS1Q8N8E1 139 aa8.43□□□□□ -1.06
NPC1-214ENST00000593280 Q8NAQ8 132 aa8.43□□□□□ -1.06
NPC1-214ENST00000593280 HIGD1BQ9P298 99 aa8.43□□□□□ -1.06
NPC1-214ENST00000593280 NOTCH3Q9UM47 2321 aa8.42□□□□□ -1.06
NPC1-214ENST00000593280 TRBV25-1A0A075B6N4 114 aa8.42□□□□□ -1.06
NPC1-214ENST00000593280 LINC00694P0DN24 101 aa8.42□□□□□ -1.06
NPC1-214ENST00000593280 SBSPONQ8IVN8 264 aa8.42□□□□□ -1.06
NPC1-214ENST00000593280 TMEM243Q9BU79 118 aa8.42□□□□□ -1.06
NPC1-214ENST00000593280 MYMXA0A1B0GTQ4 84 aa8.41□□□□□ -1.06
NPC1-214ENST00000593280 UBE2L6O14933 153 aa8.41□□□□□ -1.06
NPC1-214ENST00000593280 ZNF22P17026 224 aaPredicted RBP8.41□□□□□ -1.06
NPC1-214ENST00000593280 DNAH3Q8TD57 4116 aa8.41□□□□□ -1.06
NPC1-214ENST00000593280 A8MZ25 164 aa8.4□□□□□ -1.06
NPC1-214ENST00000593280 DAD1P61803 113 aa8.4□□□□□ -1.06
NPC1-214ENST00000593280 ANK2Q01484 3957 aa8.4□□□□□ -1.06
NPC1-214ENST00000593280 PRO0255Q9UI72 69 aa8.4□□□□□ -1.06
NPC1-214ENST00000593280 TMEM223A0PJW6 202 aa8.4□□□□□ -1.07
NPC1-214ENST00000593280 ZNF815PA8K554 130 aa8.4□□□□□ -1.07
NPC1-214ENST00000593280 GYPEP15421 78 aa8.4□□□□□ -1.07
NPC1-214ENST00000593280 AMMECR1LQ6DCA0 310 aa8.4□□□□□ -1.07
NPC1-214ENST00000593280 CSDC2Q9Y534 153 aaKnown RBP8.4□□□□□ -1.07
NPC1-214ENST00000593280 COL6A5A8TX70 2615 aa8.39□□□□□ -1.07
NPC1-214ENST00000593280 TINCRA0A1B0GVN0 87 aa8.39□□□□□ -1.07
NPC1-214ENST00000593280 H7C423 109 aa8.39□□□□□ -1.07
NPC1-214ENST00000593280 SPART-AS1P0CW21 52 aa8.39□□□□□ -1.07
NPC1-214ENST00000593280 ZNF25P17030 456 aaPredicted RBP8.39□□□□□ -1.07
NPC1-214ENST00000593280 OR5A1Q8NGJ0 315 aa8.39□□□□□ -1.07
NPC1-214ENST00000593280 CELA1Q9UNI1 258 aa8.39□□□□□ -1.07
NPC1-214ENST00000593280 G3V4G9 280 aa8.38□□□□□ -1.07
NPC1-214ENST00000593280 UBE2D1P51668 147 aa8.38□□□□□ -1.07
NPC1-214ENST00000593280 SEC11AP67812 179 aa8.38□□□□□ -1.07
NPC1-214ENST00000593280 LCE2DQ5TA82 110 aaPredicted RBP8.38□□□□□ -1.07
NPC1-214ENST00000593280 ORAOV1Q8WV07 137 aa8.38□□□□□ -1.07
NPC1-214ENST00000593280 TMEM101Q96IK0 257 aa8.38□□□□□ -1.07
NPC1-214ENST00000593280 TRBV6-8A0A0A6YYG3 113 aa8.37□□□□□ -1.07
NPC1-214ENST00000593280 LEPROTO15243 131 aa8.37□□□□□ -1.07
NPC1-214ENST00000593280 PAX4O43316 350 aa8.37□□□□□ -1.07
NPC1-214ENST00000593280 ATP6V0E2Q8NHE4 81 aa8.37□□□□□ -1.07
NPC1-214ENST00000593280 GEMIN7Q9H840 131 aaKnown RBP8.37□□□□□ -1.07
NPC1-214ENST00000593280 TEX48A0A1B0GUV7 120 aa8.36□□□□□ -1.07
NPC1-214ENST00000593280 A6NDN8 102 aa8.36□□□□□ -1.07
NPC1-214ENST00000593280 J3QQQ9 107 aa8.36□□□□□ -1.07
NPC1-214ENST00000593280 ATP5G1P05496 136 aa8.36□□□□□ -1.07
NPC1-214ENST00000593280 LGALS3P17931 250 aaKnown RBP8.36□□□□□ -1.07
NPC1-214ENST00000593280 TSPEAR-AS2P59090 65 aa8.36□□□□□ -1.07
NPC1-214ENST00000593280 IGHV3-64A0A075B6Q5 118 aa8.36□□□□□ -1.07
NPC1-214ENST00000593280 GCSHP23434 173 aa8.36□□□□□ -1.07
NPC1-214ENST00000593280 GAGE6Q13070 117 aa8.36□□□□□ -1.07
NPC1-214ENST00000593280 TAL2Q16559 108 aa8.36□□□□□ -1.07
NPC1-214ENST00000593280 SCGB1D4Q6XE38 83 aa8.36□□□□□ -1.07
NPC1-214ENST00000593280 LINC00469Q8N7U9 141 aa8.36□□□□□ -1.07
NPC1-214ENST00000593280 PLEKHB2Q96CS7 222 aa8.36□□□□□ -1.07
NPC1-214ENST00000593280 CHCHD5Q9BSY4 110 aa8.36□□□□□ -1.07
NPC1-214ENST00000593280 CDC42SE2Q9NRR3 84 aa8.36□□□□□ -1.07
NPC1-214ENST00000593280 TIRAPP58753 221 aa8.35□□□□□ -1.07
NPC1-214ENST00000593280 SAMD5Q5TGI4 173 aa8.35□□□□□ -1.07
NPC1-214ENST00000593280 HIST1H4GQ99525 98 aa8.35□□□□□ -1.07
NPC1-214ENST00000593280 RETNQ9HD89 108 aa8.35□□□□□ -1.07
NPC1-214ENST00000593280 A0A0J9YY99 117 aa8.34□□□□□ -1.07
NPC1-214ENST00000593280 F5H768 121 aa8.34□□□□□ -1.07
NPC1-214ENST00000593280 H3BRM9 83 aa8.34□□□□□ -1.07
NPC1-214ENST00000593280 FAM19A3Q7Z5A8 133 aa8.34□□□□□ -1.07
NPC1-214ENST00000593280 CEND1Q8N111 149 aa8.34□□□□□ -1.07
NPC1-214ENST00000593280 COX11Q9Y6N1 276 aa8.34□□□□□ -1.07
NPC1-214ENST00000593280 IGLV5-45A0A087WSX0 123 aa8.33□□□□□ -1.08
NPC1-214ENST00000593280 TAX1BP3O14907 124 aa8.33□□□□□ -1.08
NPC1-214ENST00000593280 HTN3P15516 51 aa8.33□□□□□ -1.08
NPC1-214ENST00000593280 HERVK_113P63121 156 aa8.33□□□□□ -1.08
NPC1-214ENST00000593280 VSIG2Q96IQ7 327 aa8.33□□□□□ -1.08
NPC1-214ENST00000593280 TRAV26-1A0A087WT03 109 aa8.32□□□□□ -1.08
NPC1-214ENST00000593280 TRAV13-1A0A0B4J241 112 aa8.32□□□□□ -1.08
NPC1-214ENST00000593280 IGHV1-58A0A0C4DH39 117 aa8.32□□□□□ -1.08
NPC1-214ENST00000593280 SPINK8P0C7L1 97 aa8.32□□□□□ -1.08
NPC1-214ENST00000593280 IGHV3-30-3P0DP02 117 aa8.32□□□□□ -1.08
NPC1-214ENST00000593280 PTTG1IPP53801 180 aa8.32□□□□□ -1.08
NPC1-214ENST00000593280 FXYD2P54710 66 aa8.32□□□□□ -1.08
NPC1-214ENST00000593280 LINC00242Q5T6M2 205 aa8.32□□□□□ -1.08
NPC1-214ENST00000593280 Q6ZVH6 145 aa8.32□□□□□ -1.08
NPC1-214ENST00000593280 TM2D2Q9BX73 214 aa8.32□□□□□ -1.08
NPC1-214ENST00000593280 A0A096LPF7 62 aa8.32□□□□□ -1.08
NPC1-214ENST00000593280 TRAV8-3A0A0A6YYJ7 113 aa8.32□□□□□ -1.08
NPC1-214ENST00000593280 CDKN2A-AS1Q9UH64 79 aa8.32□□□□□ -1.08
NPC1-214ENST00000593280 NBEAL2Q6ZNJ1 2754 aa8.32□□□□□ -1.08
NPC1-214ENST00000593280 COX6A2Q02221 97 aa8.31□□□□□ -1.08
NPC1-214ENST00000593280 C11orf68Q9H3H3 251 aaKnown RBP8.31□□□□□ -1.08
NPC1-214ENST00000593280 IGLV4-60A0A075B6I1 120 aa8.3□□□□□ -1.08
NPC1-214ENST00000593280 C12orf74Q32Q52 190 aa8.3□□□□□ -1.08
NPC1-214ENST00000593280 K7EP13 123 aa8.29□□□□□ -1.08
NPC1-214ENST00000593280 SRSF9Q13242 221 aaKnown RBP eCLIP8.29□□□□□ -1.08
NPC1-214ENST00000593280 MRPL23Q16540 153 aaKnown RBP8.29□□□□□ -1.08
NPC1-214ENST00000593280 SPANXB1Q9NS25 103 aaPredicted RBP8.29□□□□□ -1.08
NPC1-214ENST00000593280 ICOSQ9Y6W8 199 aa8.29□□□□□ -1.08
NPC1-214ENST00000593280 TMEM262E9PQX1 116 aa8.29□□□□□ -1.08
NPC1-214ENST00000593280 SMIM13P0DJ93 91 aa8.29□□□□□ -1.08
NPC1-214ENST00000593280 SH2D6Q7Z4S9 175 aa8.29□□□□□ -1.08
NPC1-214ENST00000593280 NHP2Q9NX24 153 aaKnown RBP8.29□□□□□ -1.08
NPC1-214ENST00000593280 NDUFA12Q9UI09 145 aa8.28□□□□□ -1.08
NPC1-214ENST00000593280 IGKV3OR2-268A0A0C4DH90 116 aa8.27□□□□□ -1.09
NPC1-214ENST00000593280 A0A1B0GUV1 79 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms