RNA–Protein interactions for RNA: ENST00000593013.5

HDAC5-212, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 1,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-212ENST00000593013 SMIM13P0DJ93 91 aa13.3□□□□□ -0.28
HDAC5-212ENST00000593013 SLC25A29Q8N8R3 303 aa13.3□□□□□ -0.28
HDAC5-212ENST00000593013 HIST1H4GQ99525 98 aa13.3□□□□□ -0.28
HDAC5-212ENST00000593013 KRTAP10-11P60412 298 aa13.3□□□□□ -0.28
HDAC5-212ENST00000593013 CEMP1Q6PRD7 247 aaPredicted RBP13.3□□□□□ -0.28
HDAC5-212ENST00000593013 PLEKHB2Q96CS7 222 aa13.3□□□□□ -0.28
HDAC5-212ENST00000593013 TRBV6-4A0A1B0GX49 114 aa13.29□□□□□ -0.28
HDAC5-212ENST00000593013 J3QQQ9 107 aa13.29□□□□□ -0.28
HDAC5-212ENST00000593013 TINCRA0A1B0GVN0 87 aa13.28□□□□□ -0.28
HDAC5-212ENST00000593013 GAGE12BA1L429 117 aa13.28□□□□□ -0.28
HDAC5-212ENST00000593013 GAGE7O76087 117 aa13.28□□□□□ -0.28
HDAC5-212ENST00000593013 GAGE12FP0CL80 117 aa13.28□□□□□ -0.28
HDAC5-212ENST00000593013 GAGE12GP0CL81 117 aa13.28□□□□□ -0.28
HDAC5-212ENST00000593013 GAGE12IP0CL82 117 aa13.28□□□□□ -0.28
HDAC5-212ENST00000593013 AMMECR1LQ6DCA0 310 aa13.28□□□□□ -0.28
HDAC5-212ENST00000593013 Q6ZUT4 128 aa13.28□□□□□ -0.28
HDAC5-212ENST00000593013 OR5A1Q8NGJ0 315 aa13.28□□□□□ -0.28
HDAC5-212ENST00000593013 TRGV2A0A075B6R0 118 aa13.27□□□□□ -0.28
HDAC5-212ENST00000593013 A0A1B0GWB2 263 aa13.27□□□□□ -0.28
HDAC5-212ENST00000593013 LINC00612Q8N6U2 182 aa13.27□□□□□ -0.28
HDAC5-212ENST00000593013 A0A0J9YY99 117 aa13.27□□□□□ -0.29
HDAC5-212ENST00000593013 SCGB1D4Q6XE38 83 aa13.27□□□□□ -0.29
HDAC5-212ENST00000593013 SBSPONQ8IVN8 264 aa13.27□□□□□ -0.29
HDAC5-212ENST00000593013 SPANXB1Q9NS25 103 aaPredicted RBP13.27□□□□□ -0.29
HDAC5-212ENST00000593013 LGALS3P17931 250 aaKnown RBP13.26□□□□□ -0.29
HDAC5-212ENST00000593013 KIR2DL5BQ8NHK3 375 aa13.26□□□□□ -0.29
HDAC5-212ENST00000593013 GTSF1LQ9H1H1 148 aa13.26□□□□□ -0.29
HDAC5-212ENST00000593013 CSDC2Q9Y534 153 aaKnown RBP13.26□□□□□ -0.29
HDAC5-212ENST00000593013 SMIM9A6NGZ8 99 aa13.25□□□□□ -0.29
HDAC5-212ENST00000593013 H3BUT2 72 aa13.25□□□□□ -0.29
HDAC5-212ENST00000593013 NTM-AS1Q6ZSK4 140 aa13.25□□□□□ -0.29
HDAC5-212ENST00000593013 NHP2Q9NX24 153 aaKnown RBP13.25□□□□□ -0.29
HDAC5-212ENST00000593013 RAB37Q96AX2 223 aa13.25□□□□□ -0.29
HDAC5-212ENST00000593013 GAGE12JA6NER3 117 aa13.24□□□□□ -0.29
HDAC5-212ENST00000593013 K7ERJ3 54 aa13.24□□□□□ -0.29
HDAC5-212ENST00000593013 UBE2D1P51668 147 aa13.24□□□□□ -0.29
HDAC5-212ENST00000593013 GAGE4Q13068 117 aa13.24□□□□□ -0.29
HDAC5-212ENST00000593013 GAGE5Q13069 117 aa13.24□□□□□ -0.29
HDAC5-212ENST00000593013 GAGE13Q4V321 117 aa13.24□□□□□ -0.29
HDAC5-212ENST00000593013 KPRPQ5T749 579 aaPredicted RBP13.24□□□□□ -0.29
HDAC5-212ENST00000593013 X6R8D5 127 aa13.24□□□□□ -0.29
HDAC5-212ENST00000593013 A0A1W2PPM0 123 aa13.23□□□□□ -0.29
HDAC5-212ENST00000593013 LINC00694P0DN24 101 aa13.23□□□□□ -0.29
HDAC5-212ENST00000593013 SMAGPQ0VAQ4 97 aa13.23□□□□□ -0.29
HDAC5-212ENST00000593013 FHL2Q14192 279 aa13.23□□□□□ -0.29
HDAC5-212ENST00000593013 C12orf74Q32Q52 190 aa13.23□□□□□ -0.29
HDAC5-212ENST00000593013 RNASE13Q5GAN3 156 aaKnown RBP13.23□□□□□ -0.29
HDAC5-212ENST00000593013 FAM19A3Q7Z5A8 133 aa13.23□□□□□ -0.29
HDAC5-212ENST00000593013 IGLV5-45A0A087WSX0 123 aa13.22□□□□□ -0.29
HDAC5-212ENST00000593013 TIRAPP58753 221 aa13.22□□□□□ -0.29
HDAC5-212ENST00000593013 TRGV4A0A0C4DH28 118 aa13.21□□□□□ -0.3
HDAC5-212ENST00000593013 K7EP34 96 aa13.21□□□□□ -0.3
HDAC5-212ENST00000593013 DGAT2L7PQ6IED9 249 aa13.21□□□□□ -0.3
HDAC5-212ENST00000593013 GTF2H5Q6ZYL4 71 aa13.21□□□□□ -0.3
HDAC5-212ENST00000593013 IGHV1-58A0A0C4DH39 117 aa13.2□□□□□ -0.3
HDAC5-212ENST00000593013 TMEM238LA0A1B0GVL6 79 aa13.2□□□□□ -0.3
HDAC5-212ENST00000593013 A6NJY4 79 aa13.2□□□□□ -0.3
HDAC5-212ENST00000593013 H7C423 109 aa13.2□□□□□ -0.3
HDAC5-212ENST00000593013 IGHV3-30-3P0DP02 117 aa13.2□□□□□ -0.3
HDAC5-212ENST00000593013 GAGE10A6NGK3 116 aa13.19□□□□□ -0.3
HDAC5-212ENST00000593013 SRSF9Q13242 221 aaKnown RBP eCLIP13.19□□□□□ -0.3
HDAC5-212ENST00000593013 NAA38Q9BRA0 125 aaKnown RBP13.19□□□□□ -0.3
HDAC5-212ENST00000593013 TMEM243Q9BU79 118 aa13.19□□□□□ -0.3
HDAC5-212ENST00000593013 LOC100131303A0A0U1RQF7 123 aa13.18□□□□□ -0.3
HDAC5-212ENST00000593013 IGLL5B9A064 214 aa13.18□□□□□ -0.3
HDAC5-212ENST00000593013 IGHV3-30P01768 117 aa13.18□□□□□ -0.3
HDAC5-212ENST00000593013 IGHV3-30-5P0DP03 117 aa13.18□□□□□ -0.3
HDAC5-212ENST00000593013 FABP2P12104 132 aa13.18□□□□□ -0.3
HDAC5-212ENST00000593013 VSIG2Q96IQ7 327 aa13.18□□□□□ -0.3
HDAC5-212ENST00000593013 APOC4P55056 127 aa13.17□□□□□ -0.3
HDAC5-212ENST00000593013 GEMIN7Q9H840 131 aaKnown RBP13.17□□□□□ -0.3
HDAC5-212ENST00000593013 IGHV3-64A0A075B6Q5 118 aa13.16□□□□□ -0.3
HDAC5-212ENST00000593013 C10orf126Q8N4M7 172 aa13.16□□□□□ -0.3
HDAC5-212ENST00000593013 CDC42SE2Q9NRR3 84 aa13.16□□□□□ -0.3
HDAC5-212ENST00000593013 TRAV8-3A0A0A6YYJ7 113 aa13.15□□□□□ -0.3
HDAC5-212ENST00000593013 LYRM9A8MSI8 78 aa13.15□□□□□ -0.3
HDAC5-212ENST00000593013 HERVK_113P63121 156 aa13.15□□□□□ -0.3
HDAC5-212ENST00000593013 SPCS1Q9Y6A9 102 aa13.15□□□□□ -0.3
HDAC5-212ENST00000593013 A0A0J9YXY3 114 aa13.14□□□□□ -0.31
HDAC5-212ENST00000593013 IGHV4-30-4P0DP06 118 aa13.14□□□□□ -0.31
HDAC5-212ENST00000593013 LINC00242Q5T6M2 205 aa13.14□□□□□ -0.31
HDAC5-212ENST00000593013 CDKN2A-AS1Q9UH64 79 aa13.13□□□□□ -0.31
HDAC5-212ENST00000593013 NBEAL2Q6ZNJ1 2754 aa13.13□□□□□ -0.31
HDAC5-212ENST00000593013 A8MZ25 164 aa13.13□□□□□ -0.31
HDAC5-212ENST00000593013 TMEM238C9JI98 176 aa13.13□□□□□ -0.31
HDAC5-212ENST00000593013 UBE2L6O14933 153 aa13.13□□□□□ -0.31
HDAC5-212ENST00000593013 PRB2P02812 416 aaPredicted RBP13.13□□□□□ -0.31
HDAC5-212ENST00000593013 SPINK8P0C7L1 97 aa13.13□□□□□ -0.31
HDAC5-212ENST00000593013 DEFB130BP0DP73 79 aa13.13□□□□□ -0.31
HDAC5-212ENST00000593013 DEFB130AP0DP74 79 aa13.13□□□□□ -0.31
HDAC5-212ENST00000593013 ZFAND6Q6FIF0 208 aa13.13□□□□□ -0.31
HDAC5-212ENST00000593013 TMEM101Q96IK0 257 aa13.12□□□□□ -0.31
HDAC5-212ENST00000593013 TRBV6-8A0A0A6YYG3 113 aa13.11□□□□□ -0.31
HDAC5-212ENST00000593013 IGLV5-39A0A0G2JS06 123 aa13.11□□□□□ -0.31
HDAC5-212ENST00000593013 COX6A2Q02221 97 aa13.11□□□□□ -0.31
HDAC5-212ENST00000593013 NDUFA12Q9UI09 145 aa13.11□□□□□ -0.31
HDAC5-212ENST00000593013 DEFB135Q30KP9 77 aa13.1□□□□□ -0.31
HDAC5-212ENST00000593013 LITAFQ99732 161 aa13.1□□□□□ -0.31
HDAC5-212ENST00000593013 K7EIL1 84 aa13.1□□□□□ -0.31
HDAC5-212ENST00000593013 FAM222AQ5U5X8 452 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms