RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 RMI2Q96E14 147 aa10.1□□□□□ -0.79
TRIM47-206ENST00000592942 C20orf78Q9BR46 151 aa10.1□□□□□ -0.79
TRIM47-206ENST00000592942 DNAH8Q96JB1 4490 aa10.1□□□□□ -0.79
TRIM47-206ENST00000592942 PRSS47A8MTI9 375 aa10.09□□□□□ -0.79
TRIM47-206ENST00000592942 UBE2L6O14933 153 aa10.09□□□□□ -0.79
TRIM47-206ENST00000592942 NPYP01303 97 aa10.09□□□□□ -0.79
TRIM47-206ENST00000592942 RPL32P62910 135 aaKnown RBP10.09□□□□□ -0.79
TRIM47-206ENST00000592942 REG3AQ06141 175 aa10.09□□□□□ -0.79
TRIM47-206ENST00000592942 LECT2O14960 151 aa10.08□□□□□ -0.8
TRIM47-206ENST00000592942 FGF6P10767 208 aa10.08□□□□□ -0.8
TRIM47-206ENST00000592942 C1orf43Q9BWL3 253 aa10.08□□□□□ -0.8
TRIM47-206ENST00000592942 CRPP02741 224 aa10.07□□□□□ -0.8
TRIM47-206ENST00000592942 CDPF1Q6NVV7 123 aa10.07□□□□□ -0.8
TRIM47-206ENST00000592942 C1orf196B1AJZ1 125 aa10.06□□□□□ -0.8
TRIM47-206ENST00000592942 KRTAP10-1P60331 282 aa10.06□□□□□ -0.8
TRIM47-206ENST00000592942 ABCA13Q86UQ4 5058 aa10.06□□□□□ -0.8
TRIM47-206ENST00000592942 C18orf32Q8TCD1 76 aa10.05□□□□□ -0.8
TRIM47-206ENST00000592942 MAP1LC3AQ9H492 121 aa10.05□□□□□ -0.8
TRIM47-206ENST00000592942 IGLV10-54A0A075B6I4 117 aa10.04□□□□□ -0.8
TRIM47-206ENST00000592942 TRAV8-4A0A0B4J246 113 aa10.04□□□□□ -0.8
TRIM47-206ENST00000592942 HIST1H2BKO60814 126 aa10.04□□□□□ -0.8
TRIM47-206ENST00000592942 HIST1H2BJP06899 126 aa10.04□□□□□ -0.8
TRIM47-206ENST00000592942 HIST1H2BOP23527 126 aa10.04□□□□□ -0.8
TRIM47-206ENST00000592942 HIST1H2BBP33778 126 aa10.04□□□□□ -0.8
TRIM47-206ENST00000592942 HIST1H2BDP58876 126 aa10.04□□□□□ -0.8
TRIM47-206ENST00000592942 HIST1H2BCP62807 126 aa10.04□□□□□ -0.8
TRIM47-206ENST00000592942 HIST2H2BEQ16778 126 aa10.04□□□□□ -0.8
TRIM47-206ENST00000592942 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.04□□□□□ -0.8
TRIM47-206ENST00000592942 AMMECR1LQ6DCA0 310 aa10.04□□□□□ -0.8
TRIM47-206ENST00000592942 RNASEKQ6P5S7 137 aaKnown RBP10.04□□□□□ -0.8
TRIM47-206ENST00000592942 MRPL52Q86TS9 123 aaKnown RBP10.04□□□□□ -0.8
TRIM47-206ENST00000592942 NTN5Q8WTR8 489 aaPredicted RBP10.04□□□□□ -0.8
TRIM47-206ENST00000592942 HIST1H2BHQ93079 126 aa10.04□□□□□ -0.8
TRIM47-206ENST00000592942 HIST1H2BNQ99877 126 aa10.04□□□□□ -0.8
TRIM47-206ENST00000592942 HIST1H2BMQ99879 126 aa10.04□□□□□ -0.8
TRIM47-206ENST00000592942 SMIM2Q9BVW6 85 aa10.04□□□□□ -0.8
TRIM47-206ENST00000592942 ZNF25P17030 456 aaPredicted RBP10.03□□□□□ -0.8
TRIM47-206ENST00000592942 RAB5BP61020 215 aa10.03□□□□□ -0.8
TRIM47-206ENST00000592942 KIR2DL4Q99706 377 aa10.03□□□□□ -0.8
TRIM47-206ENST00000592942 CDC42SE2Q9NRR3 84 aa10.03□□□□□ -0.8
TRIM47-206ENST00000592942 IGLV5-52A0A0A0MRZ9 124 aa10.02□□□□□ -0.81
TRIM47-206ENST00000592942 CDK2AP2O75956 126 aa10.02□□□□□ -0.81
TRIM47-206ENST00000592942 GCSHP23434 173 aa10.02□□□□□ -0.81
TRIM47-206ENST00000592942 FCER1GP30273 86 aa10.02□□□□□ -0.81
TRIM47-206ENST00000592942 Q8N8P6 123 aa10.02□□□□□ -0.81
TRIM47-206ENST00000592942 FAM104AQ969W3 186 aa10.02□□□□□ -0.81
TRIM47-206ENST00000592942 NXT2Q9NPJ8 142 aaKnown RBP10.02□□□□□ -0.81
TRIM47-206ENST00000592942 UBE2D4Q9Y2X8 147 aa10.02□□□□□ -0.81
TRIM47-206ENST00000592942 LOC389332A0A1B0GUA5 103 aa10.01□□□□□ -0.81
TRIM47-206ENST00000592942 TCAPO15273 167 aa10.01□□□□□ -0.81
TRIM47-206ENST00000592942 OR5A1Q8NGJ0 315 aa10.01□□□□□ -0.81
TRIM47-206ENST00000592942 CSDC2Q9Y534 153 aaKnown RBP10.01□□□□□ -0.81
TRIM47-206ENST00000592942 IGLV2-33A0A075B6J2 118 aaPredicted RBP10□□□□□ -0.81
TRIM47-206ENST00000592942 LINC01546A6NGU7 62 aa10□□□□□ -0.81
TRIM47-206ENST00000592942 USP17L23D6RBM5 183 aa10□□□□□ -0.81
TRIM47-206ENST00000592942 K7EMI3 77 aa10□□□□□ -0.81
TRIM47-206ENST00000592942 IFI27P40305 119 aaPredicted RBP10□□□□□ -0.81
TRIM47-206ENST00000592942 PRSS3P2Q8NHM4 247 aa10□□□□□ -0.81
TRIM47-206ENST00000592942 IGKV3OR2-268A0A0C4DH90 116 aa9.99□□□□□ -0.81
TRIM47-206ENST00000592942 PRSS1P07477 247 aa9.99□□□□□ -0.81
TRIM47-206ENST00000592942 XGP55808 180 aa9.99□□□□□ -0.81
TRIM47-206ENST00000592942 RPL39P62891 51 aaKnown RBP9.99□□□□□ -0.81
TRIM47-206ENST00000592942 BAGE3Q86Y29 109 aa9.99□□□□□ -0.81
TRIM47-206ENST00000592942 ZNF664Q8N3J9 261 aa9.99□□□□□ -0.81
TRIM47-206ENST00000592942 URB1-AS1Q96HZ7 61 aa9.99□□□□□ -0.81
TRIM47-206ENST00000592942 TMEM101Q96IK0 257 aa9.99□□□□□ -0.81
TRIM47-206ENST00000592942 LINC00959A0A1B0GUT2 108 aa9.98□□□□□ -0.81
TRIM47-206ENST00000592942 LINC00614P0C842 121 aa9.98□□□□□ -0.81
TRIM47-206ENST00000592942 COA6Q5JTJ3 125 aaKnown RBP9.98□□□□□ -0.81
TRIM47-206ENST00000592942 FA2HQ7L5A8 372 aa9.98□□□□□ -0.81
TRIM47-206ENST00000592942 CHCHD10Q8WYQ3 142 aaPredicted RBP9.98□□□□□ -0.81
TRIM47-206ENST00000592942 TIMM21Q9BVV7 248 aa9.98□□□□□ -0.81
TRIM47-206ENST00000592942 GAGE12HA6NDE8 117 aa9.97□□□□□ -0.81
TRIM47-206ENST00000592942 CHCHD1Q96BP2 118 aaKnown RBP9.97□□□□□ -0.81
TRIM47-206ENST00000592942 KRTAP4-5Q9BYR2 181 aa9.97□□□□□ -0.81
TRIM47-206ENST00000592942 FAM30AQ9NZY2 134 aa9.97□□□□□ -0.81
TRIM47-206ENST00000592942 FAT1Q14517 4588 aa9.96□□□□□ -0.81
TRIM47-206ENST00000592942 FOXI1Q12951 378 aa9.96□□□□□ -0.82
TRIM47-206ENST00000592942 LINC01620Q4KN68 170 aa9.96□□□□□ -0.82
TRIM47-206ENST00000592942 ORMDL2Q53FV1 153 aa9.96□□□□□ -0.82
TRIM47-206ENST00000592942 AP5S1Q9NUS5 200 aa9.96□□□□□ -0.82
TRIM47-206ENST00000592942 SLPIP03973 132 aa9.95□□□□□ -0.82
TRIM47-206ENST00000592942 LINC00310P59036 64 aa9.95□□□□□ -0.82
TRIM47-206ENST00000592942 C14orf177Q52M58 125 aa9.95□□□□□ -0.82
TRIM47-206ENST00000592942 RNASE13Q5GAN3 156 aaKnown RBP9.95□□□□□ -0.82
TRIM47-206ENST00000592942 DGAT2L7PQ6IED9 249 aa9.95□□□□□ -0.82
TRIM47-206ENST00000592942 TMEM18Q96B42 140 aa9.95□□□□□ -0.82
TRIM47-206ENST00000592942 OPRPNQ99935 248 aaPredicted RBP9.95□□□□□ -0.82
TRIM47-206ENST00000592942 SERF1AO75920 110 aa9.94□□□□□ -0.82
TRIM47-206ENST00000592942 NDUFA6P56556 154 aa9.94□□□□□ -0.82
TRIM47-206ENST00000592942 Q6ZUT4 128 aa9.94□□□□□ -0.82
TRIM47-206ENST00000592942 C15orf56Q8N910 161 aa9.94□□□□□ -0.82
TRIM47-206ENST00000592942 CCL25O15444 150 aa9.93□□□□□ -0.82
TRIM47-206ENST00000592942 G0S2P27469 103 aa9.93□□□□□ -0.82
TRIM47-206ENST00000592942 SMAGPQ0VAQ4 97 aa9.93□□□□□ -0.82
TRIM47-206ENST00000592942 NUPR1O60356 82 aa9.92□□□□□ -0.82
TRIM47-206ENST00000592942 HSBP1O75506 76 aa9.92□□□□□ -0.82
TRIM47-206ENST00000592942 XCL1P47992 114 aa9.92□□□□□ -0.82
TRIM47-206ENST00000592942 MRPS36P82909 103 aaKnown RBP9.92□□□□□ -0.82
TRIM47-206ENST00000592942 Q6ZSA8 131 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms