RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 COX7A2LO14548 114 aa8.99□□□□□ -0.97
SMARCA4-217ENST00000591595 SNRPD3P62318 126 aaKnown RBP8.99□□□□□ -0.97
SMARCA4-217ENST00000591595 LY6EQ16553 131 aa8.99□□□□□ -0.97
SMARCA4-217ENST00000591595 UNQ9165/PRO28630Q6UXU0 137 aa8.99□□□□□ -0.97
SMARCA4-217ENST00000591595 BRD3OSQ6XYD6 125 aa8.99□□□□□ -0.97
SMARCA4-217ENST00000591595 C22orf24Q9Y442 160 aa8.99□□□□□ -0.97
SMARCA4-217ENST00000591595 MAP1AP78559 2803 aaPredicted RBP8.99□□□□□ -0.97
SMARCA4-217ENST00000591595 A0A1W2PPR1 153 aa8.98□□□□□ -0.97
SMARCA4-217ENST00000591595 F5H697 171 aa8.98□□□□□ -0.97
SMARCA4-217ENST00000591595 C4orf48Q5BLP8 95 aa8.98□□□□□ -0.97
SMARCA4-217ENST00000591595 TMEM141Q96I45 108 aa8.98□□□□□ -0.97
SMARCA4-217ENST00000591595 LINC00846Q9NV44 126 aa8.98□□□□□ -0.97
SMARCA4-217ENST00000591595 TRBV12-3P01733 135 aa8.98□□□□□ -0.97
SMARCA4-217ENST00000591595 HILS1P60008 231 aa8.98□□□□□ -0.97
SMARCA4-217ENST00000591595 FAM222AQ5U5X8 452 aa8.98□□□□□ -0.97
SMARCA4-217ENST00000591595 TRAV23DV6A0A075B6W5 121 aa8.98□□□□□ -0.97
SMARCA4-217ENST00000591595 GNRH2O43555 120 aa8.98□□□□□ -0.97
SMARCA4-217ENST00000591595 RPL39P62891 51 aaKnown RBP8.98□□□□□ -0.97
SMARCA4-217ENST00000591595 C5orf56Q8N8D9 126 aa8.98□□□□□ -0.97
SMARCA4-217ENST00000591595 ZNF580Q9UK33 172 aa8.97□□□□□ -0.97
SMARCA4-217ENST00000591595 RNF223E7ERA6 249 aa8.97□□□□□ -0.97
SMARCA4-217ENST00000591595 NXPH4O95158 308 aa8.97□□□□□ -0.97
SMARCA4-217ENST00000591595 VSIG2Q96IQ7 327 aa8.97□□□□□ -0.97
SMARCA4-217ENST00000591595 MIAQ16674 131 aa8.96□□□□□ -0.97
SMARCA4-217ENST00000591595 MOB4Q9Y3A3 225 aa8.96□□□□□ -0.97
SMARCA4-217ENST00000591595 TIMM17AQ99595 171 aa8.96□□□□□ -0.97
SMARCA4-217ENST00000591595 IGHV4-4A0A075B6R2 117 aa8.96□□□□□ -0.98
SMARCA4-217ENST00000591595 RPL28P46779 137 aaKnown RBP8.96□□□□□ -0.98
SMARCA4-217ENST00000591595 C1orf158Q8N1D5 194 aa8.96□□□□□ -0.98
SMARCA4-217ENST00000591595 ZFAND2AQ8N6M9 145 aa8.96□□□□□ -0.98
SMARCA4-217ENST00000591595 MPLKIPQ8TAP9 179 aa8.96□□□□□ -0.98
SMARCA4-217ENST00000591595 CHD8Q9HCK8 2581 aa8.96□□□□□ -0.98
SMARCA4-217ENST00000591595 BEAN1Q3B7T3 259 aa8.95□□□□□ -0.98
SMARCA4-217ENST00000591595 CSPG4Q6UVK1 2322 aa8.95□□□□□ -0.98
SMARCA4-217ENST00000591595 LENEPQ9Y5L5 61 aa8.95□□□□□ -0.98
SMARCA4-217ENST00000591595 U3KQE9 123 aa8.95□□□□□ -0.98
SMARCA4-217ENST00000591595 FAM74A4Q5TZK3 123 aa8.95□□□□□ -0.98
SMARCA4-217ENST00000591595 Q6ZRU5 148 aa8.94□□□□□ -0.98
SMARCA4-217ENST00000591595 PRR15Q8IV56 129 aa8.94□□□□□ -0.98
SMARCA4-217ENST00000591595 LMO4P61968 165 aa8.94□□□□□ -0.98
SMARCA4-217ENST00000591595 A0A087WWL8 130 aa8.93□□□□□ -0.98
SMARCA4-217ENST00000591595 PAX4O43316 350 aa8.93□□□□□ -0.98
SMARCA4-217ENST00000591595 C14orf132Q9NPU4 83 aa8.93□□□□□ -0.98
SMARCA4-217ENST00000591595 RHPN1-AS1Q9BWJ2 59 aa8.93□□□□□ -0.98
SMARCA4-217ENST00000591595 F8WEM9 126 aa8.93□□□□□ -0.98
SMARCA4-217ENST00000591595 IGHV3-30-3P0DP02 117 aa8.93□□□□□ -0.98
SMARCA4-217ENST00000591595 Q8N2B8 174 aa8.93□□□□□ -0.98
SMARCA4-217ENST00000591595 ITLN2Q8WWU7 325 aaPredicted RBP8.93□□□□□ -0.98
SMARCA4-217ENST00000591595 SPTBN4Q9H254 2564 aa8.92□□□□□ -0.98
SMARCA4-217ENST00000591595 IGKV3-20P01619 116 aa8.92□□□□□ -0.98
SMARCA4-217ENST00000591595 NDUFA4O00483 81 aa8.92□□□□□ -0.98
SMARCA4-217ENST00000591595 PPP1R17O96001 155 aa8.92□□□□□ -0.98
SMARCA4-217ENST00000591595 KLKP1Q107X0 134 aa8.92□□□□□ -0.98
SMARCA4-217ENST00000591595 SORL1Q92673 2214 aa8.92□□□□□ -0.98
SMARCA4-217ENST00000591595 DOPEY2Q9Y3R5 2298 aa8.92□□□□□ -0.98
SMARCA4-217ENST00000591595 CFHR3Q02985 330 aa8.92□□□□□ -0.98
SMARCA4-217ENST00000591595 GPHB5Q86YW7 130 aa8.92□□□□□ -0.98
SMARCA4-217ENST00000591595 STHQ8IWL8 128 aa8.92□□□□□ -0.98
SMARCA4-217ENST00000591595 COL12A1Q99715 3063 aa8.91□□□□□ -0.98
SMARCA4-217ENST00000591595 RNASE3P12724 160 aaKnown RBP8.9□□□□□ -0.98
SMARCA4-217ENST00000591595 SOSTDC1Q6X4U4 206 aa8.9□□□□□ -0.98
SMARCA4-217ENST00000591595 WFDC9Q8NEX5 89 aa8.9□□□□□ -0.98
SMARCA4-217ENST00000591595 NDUFA12Q9UI09 145 aa8.9□□□□□ -0.98
SMARCA4-217ENST00000591595 SNURFQ9Y675 71 aa8.9□□□□□ -0.98
SMARCA4-217ENST00000591595 H3BUX3 64 aa8.9□□□□□ -0.98
SMARCA4-217ENST00000591595 TRBV27A0A0K0K1C4 114 aa8.9□□□□□ -0.99
SMARCA4-217ENST00000591595 MRPL55Q7Z7F7 128 aaKnown RBP8.9□□□□□ -0.99
SMARCA4-217ENST00000591595 OPRPNQ99935 248 aaPredicted RBP8.9□□□□□ -0.99
SMARCA4-217ENST00000591595 Q9HAA7 133 aa8.9□□□□□ -0.99
SMARCA4-217ENST00000591595 PLAC8L1A1L4L8 177 aa8.89□□□□□ -0.99
SMARCA4-217ENST00000591595 IGHV1-69P01742 117 aa8.89□□□□□ -0.99
SMARCA4-217ENST00000591595 BLCAPP62952 87 aa8.89□□□□□ -0.99
SMARCA4-217ENST00000591595 S100A7L2Q5SY68 101 aa8.89□□□□□ -0.99
SMARCA4-217ENST00000591595 RMI2Q96E14 147 aa8.89□□□□□ -0.99
SMARCA4-217ENST00000591595 A0A0J9YXV3 536 aa8.89□□□□□ -0.99
SMARCA4-217ENST00000591595 CELSR1Q9NYQ6 3014 aa8.89□□□□□ -0.99
SMARCA4-217ENST00000591595 FAM218AQ96MZ4 157 aa8.89□□□□□ -0.99
SMARCA4-217ENST00000591595 KLK9Q2XQG4 91 aa8.88□□□□□ -0.99
SMARCA4-217ENST00000591595 KLK9Q9UKQ9 250 aa8.88□□□□□ -0.99
SMARCA4-217ENST00000591595 TRAV7A0A075B6U4 112 aa8.88□□□□□ -0.99
SMARCA4-217ENST00000591595 USMG5Q96IX5 58 aa8.88□□□□□ -0.99
SMARCA4-217ENST00000591595 VCYO14598 125 aa8.87□□□□□ -0.99
SMARCA4-217ENST00000591595 IGHV4-38-2P0DP08 117 aa8.87□□□□□ -0.99
SMARCA4-217ENST00000591595 SUMO4Q6EEV6 95 aa8.87□□□□□ -0.99
SMARCA4-217ENST00000591595 A8MZ25 164 aa8.87□□□□□ -0.99
SMARCA4-217ENST00000591595 SOCS3O14543 225 aa8.87□□□□□ -0.99
SMARCA4-217ENST00000591595 ATP5EP56381 51 aaPredicted RBP8.87□□□□□ -0.99
SMARCA4-217ENST00000591595 FAM229BQ4G0N7 80 aa8.87□□□□□ -0.99
SMARCA4-217ENST00000591595 C9orf129Q5T035 196 aaKnown RBP8.87□□□□□ -0.99
SMARCA4-217ENST00000591595 LAMTOR3Q9UHA4 124 aa8.87□□□□□ -0.99
SMARCA4-217ENST00000591595 MED14OSP0DP75 135 aa8.86□□□□□ -0.99
SMARCA4-217ENST00000591595 HTN1P15515 57 aa8.86□□□□□ -0.99
SMARCA4-217ENST00000591595 ENHOQ6UWT2 76 aa8.86□□□□□ -0.99
SMARCA4-217ENST00000591595 IGHV4-61A0A0C4DH41 118 aa8.85□□□□□ -0.99
SMARCA4-217ENST00000591595 ATP5EP2Q5VTU8 51 aa8.85□□□□□ -0.99
SMARCA4-217ENST00000591595 HOXD3P31249 432 aaPredicted RBP8.84□□□□□ -0.99
SMARCA4-217ENST00000591595 POLR2KP53803 58 aaKnown RBP8.84□□□□□ -0.99
SMARCA4-217ENST00000591595 NOTCH3Q9UM47 2321 aa8.84□□□□□ -0.99
SMARCA4-217ENST00000591595 MUC4Q99102 2169 aa8.84□□□□□ -0.99
SMARCA4-217ENST00000591595 TRAV13-2A0A0B4J235 113 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms