RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 IGKV3OR2-268A0A0C4DH90 116 aa14.12□□□□□ -0.15
ATG4D-212ENST00000590096 C16orf90A8MZG2 172 aa14.12□□□□□ -0.15
ATG4D-212ENST00000590096 MAPKAPK5-AS1Q8N8E1 139 aa14.12□□□□□ -0.15
ATG4D-212ENST00000590096 BAALCQ8WXS3 180 aa14.12□□□□□ -0.15
ATG4D-212ENST00000590096 PGPEP1Q9NXJ5 209 aa14.12□□□□□ -0.15
ATG4D-212ENST00000590096 LECT2O14960 151 aa14.11□□□□□ -0.15
ATG4D-212ENST00000590096 Q8N8P6 123 aa14.11□□□□□ -0.15
ATG4D-212ENST00000590096 MRPL18Q9H0U6 180 aaKnown RBP14.11□□□□□ -0.15
ATG4D-212ENST00000590096 DYNC1H1Q14204 4646 aaKnown RBP14.11□□□□□ -0.15
ATG4D-212ENST00000590096 PCLOQ9Y6V0 5065 aa14.1□□□□□ -0.15
ATG4D-212ENST00000590096 FABP9Q0Z7S8 132 aa14.1□□□□□ -0.15
ATG4D-212ENST00000590096 CDPF1Q6NVV7 123 aa14.1□□□□□ -0.15
ATG4D-212ENST00000590096 Q8N814 137 aa14.1□□□□□ -0.15
ATG4D-212ENST00000590096 UBE2D4Q9Y2X8 147 aa14.1□□□□□ -0.15
ATG4D-212ENST00000590096 ZNF664Q8N3J9 261 aa14.09□□□□□ -0.15
ATG4D-212ENST00000590096 NXT2Q9NPJ8 142 aaKnown RBP14.09□□□□□ -0.15
ATG4D-212ENST00000590096 RPL39P62891 51 aaKnown RBP14.08□□□□□ -0.16
ATG4D-212ENST00000590096 WFDC2Q14508 124 aa14.08□□□□□ -0.16
ATG4D-212ENST00000590096 TIMM21Q9BVV7 248 aa14.08□□□□□ -0.16
ATG4D-212ENST00000590096 CDC42SE2Q9NRR3 84 aa14.08□□□□□ -0.16
ATG4D-212ENST00000590096 CSDC2Q9Y534 153 aaKnown RBP14.08□□□□□ -0.16
ATG4D-212ENST00000590096 TRAPPC1Q9Y5R8 145 aa14.08□□□□□ -0.16
ATG4D-212ENST00000590096 RYR1P21817 5038 aa14.07□□□□□ -0.16
ATG4D-212ENST00000590096 NTN5Q8WTR8 489 aaPredicted RBP14.07□□□□□ -0.16
ATG4D-212ENST00000590096 SMCO4Q9NRQ5 59 aa14.07□□□□□ -0.16
ATG4D-212ENST00000590096 K7EMI3 77 aa14.06□□□□□ -0.16
ATG4D-212ENST00000590096 ORMDL2Q53FV1 153 aa14.06□□□□□ -0.16
ATG4D-212ENST00000590096 KRTAP26-1Q6PEX3 210 aa14.06□□□□□ -0.16
ATG4D-212ENST00000590096 ALKBH7Q9BT30 221 aaPredicted RBP14.06□□□□□ -0.16
ATG4D-212ENST00000590096 DNAH5Q8TE73 4624 aa14.06□□□□□ -0.16
ATG4D-212ENST00000590096 FUSP35637 526 aaKnown RBP eCLIP14.05□□□□□ -0.16
ATG4D-212ENST00000590096 IFI27P40305 119 aaPredicted RBP14.05□□□□□ -0.16
ATG4D-212ENST00000590096 C14orf177Q52M58 125 aa14.05□□□□□ -0.16
ATG4D-212ENST00000590096 SPANXA1Q9NS26 97 aa14.05□□□□□ -0.16
ATG4D-212ENST00000590096 IGLV5-52A0A0A0MRZ9 124 aa14.04□□□□□ -0.16
ATG4D-212ENST00000590096 CBLN2Q8IUK8 224 aa14.04□□□□□ -0.16
ATG4D-212ENST00000590096 CHCHD10Q8WYQ3 142 aaPredicted RBP14.04□□□□□ -0.16
ATG4D-212ENST00000590096 SS18Q15532 418 aa14.03□□□□□ -0.16
ATG4D-212ENST00000590096 PRSS3P2Q8NHM4 247 aa14.03□□□□□ -0.16
ATG4D-212ENST00000590096 YPEL4Q96NS1 127 aa14.03□□□□□ -0.16
ATG4D-212ENST00000590096 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.02□□□□□ -0.17
ATG4D-212ENST00000590096 LINC00959A0A1B0GUT2 108 aa14.02□□□□□ -0.17
ATG4D-212ENST00000590096 GAGE12HA6NDE8 117 aa14.02□□□□□ -0.17
ATG4D-212ENST00000590096 USP17L23D6RBM5 183 aa14.02□□□□□ -0.17
ATG4D-212ENST00000590096 RNASE13Q5GAN3 156 aaKnown RBP14.02□□□□□ -0.17
ATG4D-212ENST00000590096 Q6ZUT4 128 aa14.02□□□□□ -0.17
ATG4D-212ENST00000590096 CYSLTR1Q9Y271 337 aa14.01□□□□□ -0.17
ATG4D-212ENST00000590096 G0S2P27469 103 aa14□□□□□ -0.17
ATG4D-212ENST00000590096 C2orf66Q6UXQ4 117 aa14□□□□□ -0.17
ATG4D-212ENST00000590096 LRP1BQ9NZR2 4599 aa13.99□□□□□ -0.17
ATG4D-212ENST00000590096 CCL25O15444 150 aa13.99□□□□□ -0.17
ATG4D-212ENST00000590096 XCL1P47992 114 aa13.99□□□□□ -0.17
ATG4D-212ENST00000590096 MRPS36P82909 103 aaKnown RBP13.99□□□□□ -0.17
ATG4D-212ENST00000590096 PYGO1Q9Y3Y4 419 aa13.99□□□□□ -0.17
ATG4D-212ENST00000590096 C1orf196B1AJZ1 125 aa13.98□□□□□ -0.17
ATG4D-212ENST00000590096 GCSHP23434 173 aa13.98□□□□□ -0.17
ATG4D-212ENST00000590096 TRAV13-1A0A0B4J241 112 aa13.97□□□□□ -0.17
ATG4D-212ENST00000590096 FA2HQ7L5A8 372 aa13.97□□□□□ -0.17
ATG4D-212ENST00000590096 OPRPNQ99935 248 aaPredicted RBP13.97□□□□□ -0.17
ATG4D-212ENST00000590096 CFAP161Q6P656 301 aa13.96□□□□□ -0.17
ATG4D-212ENST00000590096 FOXI1Q12951 378 aa13.95□□□□□ -0.18
ATG4D-212ENST00000590096 CD164L2Q6UWJ8 174 aa13.95□□□□□ -0.18
ATG4D-212ENST00000590096 TMEM141Q96I45 108 aa13.95□□□□□ -0.18
ATG4D-212ENST00000590096 PRSS1P07477 247 aa13.94□□□□□ -0.18
ATG4D-212ENST00000590096 C18orf32Q8TCD1 76 aa13.94□□□□□ -0.18
ATG4D-212ENST00000590096 FAM104AQ969W3 186 aa13.94□□□□□ -0.18
ATG4D-212ENST00000590096 IGLV4-3A0A075B6K6 122 aa13.93□□□□□ -0.18
ATG4D-212ENST00000590096 hDV102S1A0JD36 115 aa13.93□□□□□ -0.18
ATG4D-212ENST00000590096 LINC01546A6NGU7 62 aa13.93□□□□□ -0.18
ATG4D-212ENST00000590096 IFITM10A6NMD0 228 aa13.93□□□□□ -0.18
ATG4D-212ENST00000590096 Q6ZN92 141 aa13.93□□□□□ -0.18
ATG4D-212ENST00000590096 NPSP0C0P6 89 aa13.92□□□□□ -0.18
ATG4D-212ENST00000590096 TOMM6Q96B49 74 aa13.92□□□□□ -0.18
ATG4D-212ENST00000590096 LINC01549A6NIU2 74 aa13.91□□□□□ -0.18
ATG4D-212ENST00000590096 KRTAP10-1P60331 282 aa13.91□□□□□ -0.18
ATG4D-212ENST00000590096 TEX43Q6ZNM6 134 aa13.91□□□□□ -0.18
ATG4D-212ENST00000590096 AP5S1Q9NUS5 200 aa13.91□□□□□ -0.18
ATG4D-212ENST00000590096 C15orf56Q8N910 161 aa13.9□□□□□ -0.18
ATG4D-212ENST00000590096 C2orf88Q9BSF0 95 aa13.9□□□□□ -0.18
ATG4D-212ENST00000590096 IGIPA6NJ69 53 aa13.89□□□□□ -0.19
ATG4D-212ENST00000590096 CDK2AP2O75956 126 aa13.89□□□□□ -0.19
ATG4D-212ENST00000590096 RAB5BP61020 215 aa13.89□□□□□ -0.19
ATG4D-212ENST00000590096 PAPPA-AS1Q5QFB9 102 aa13.89□□□□□ -0.19
ATG4D-212ENST00000590096 TIMM17AQ99595 171 aa13.89□□□□□ -0.19
ATG4D-212ENST00000590096 VCX2Q9H322 139 aa13.89□□□□□ -0.19
ATG4D-212ENST00000590096 COX7A2LO14548 114 aa13.88□□□□□ -0.19
ATG4D-212ENST00000590096 LINC00614P0C842 121 aa13.88□□□□□ -0.19
ATG4D-212ENST00000590096 MALP21145 153 aa13.88□□□□□ -0.19
ATG4D-212ENST00000590096 SCGB3A1Q96QR1 104 aa13.88□□□□□ -0.19
ATG4D-212ENST00000590096 IGHV1-58A0A0C4DH39 117 aa13.87□□□□□ -0.19
ATG4D-212ENST00000590096 HIGD2BQ4VC39 106 aa13.87□□□□□ -0.19
ATG4D-212ENST00000590096 ERASQ7Z444 233 aa13.87□□□□□ -0.19
ATG4D-212ENST00000590096 AMELXQ99217 191 aa13.86□□□□□ -0.19
ATG4D-212ENST00000590096 GVQW2A0A096LPI5 108 aaPredicted RBP13.85□□□□□ -0.19
ATG4D-212ENST00000590096 COLCA2A8K830 154 aa13.85□□□□□ -0.19
ATG4D-212ENST00000590096 TRGC2P03986 189 aa13.85□□□□□ -0.19
ATG4D-212ENST00000590096 LINC01620Q4KN68 170 aa13.85□□□□□ -0.19
ATG4D-212ENST00000590096 URB1-AS1Q96HZ7 61 aa13.85□□□□□ -0.19
ATG4D-212ENST00000590096 APOBP04114 4563 aaKnown RBP13.85□□□□□ -0.19
ATG4D-212ENST00000590096 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 614.5 ms