RNA–Protein interactions for RNA: ENST00000589843.1

AP001029.1-201, humanhuman

TSL 3 BASIC

Gene AP001029.1, Length 168 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001029.1-201ENST00000589843 IFITM3Q01628 133 aa7.55□□□□□ -1.2
AP001029.1-201ENST00000589843 GAGE2EQ4V326 116 aa7.55□□□□□ -1.2
AP001029.1-201ENST00000589843 TYMSOSQ8TAI1 123 aa7.55□□□□□ -1.2
AP001029.1-201ENST00000589843 TSKUQ8WUA8 353 aa7.55□□□□□ -1.2
AP001029.1-201ENST00000589843 BATF3Q9NR55 127 aa7.55□□□□□ -1.2
AP001029.1-201ENST00000589843 CDC42SE2Q9NRR3 84 aa7.55□□□□□ -1.2
AP001029.1-201ENST00000589843 GAGE2DQ9UEU5 116 aa7.55□□□□□ -1.2
AP001029.1-201ENST00000589843 SDHAF1A6NFY7 115 aa7.54□□□□□ -1.2
AP001029.1-201ENST00000589843 TPRXLQ17RH7 258 aa7.54□□□□□ -1.2
AP001029.1-201ENST00000589843 C2orf48Q96LS8 159 aa7.54□□□□□ -1.2
AP001029.1-201ENST00000589843 MARVELD1Q9BSK0 173 aa7.54□□□□□ -1.2
AP001029.1-201ENST00000589843 TMEM242Q9NWH2 141 aa7.54□□□□□ -1.2
AP001029.1-201ENST00000589843 IGLV7-46A0A075B6I9 117 aa7.53□□□□□ -1.2
AP001029.1-201ENST00000589843 BORCS7-ASMTA0A0B4J1R7 106 aa7.53□□□□□ -1.2
AP001029.1-201ENST00000589843 PMCHP20382 165 aa7.53□□□□□ -1.2
AP001029.1-201ENST00000589843 RPL35P42766 123 aaKnown RBP7.53□□□□□ -1.2
AP001029.1-201ENST00000589843 FOXA3P55318 350 aaPredicted RBP7.53□□□□□ -1.2
AP001029.1-201ENST00000589843 C10orf25Q5T742 122 aa7.53□□□□□ -1.2
AP001029.1-201ENST00000589843 TMUB2Q71RG4 321 aa7.53□□□□□ -1.2
AP001029.1-201ENST00000589843 KRTAP4-1Q9BYQ7 146 aa7.53□□□□□ -1.2
AP001029.1-201ENST00000589843 ANAPC11Q9NYG5 84 aa7.53□□□□□ -1.2
AP001029.1-201ENST00000589843 TSHBP01222 138 aa7.52□□□□□ -1.21
AP001029.1-201ENST00000589843 ESDP10768 282 aa7.52□□□□□ -1.21
AP001029.1-201ENST00000589843 RPS20P60866 119 aaKnown RBP7.52□□□□□ -1.21
AP001029.1-201ENST00000589843 TWIST1Q15672 202 aa7.52□□□□□ -1.21
AP001029.1-201ENST00000589843 TRAV13-1A0A0B4J241 112 aa7.51□□□□□ -1.21
AP001029.1-201ENST00000589843 F2Z2F3 143 aa7.51□□□□□ -1.21
AP001029.1-201ENST00000589843 ZNF861PO60384 105 aa7.51□□□□□ -1.21
AP001029.1-201ENST00000589843 PFDN1O60925 122 aa7.51□□□□□ -1.21
AP001029.1-201ENST00000589843 UPK1BO75841 260 aa7.51□□□□□ -1.21
AP001029.1-201ENST00000589843 CENPWQ5EE01 88 aa7.51□□□□□ -1.21
AP001029.1-201ENST00000589843 MRAP2Q96G30 205 aa7.51□□□□□ -1.21
AP001029.1-201ENST00000589843 RNASE7Q9H1E1 156 aaKnown RBP7.51□□□□□ -1.21
AP001029.1-201ENST00000589843 G3V3Q6 166 aa7.5□□□□□ -1.21
AP001029.1-201ENST00000589843 I3L3M4 83 aa7.5□□□□□ -1.21
AP001029.1-201ENST00000589843 IFNA1P01562 189 aa7.5□□□□□ -1.21
AP001029.1-201ENST00000589843 CRYGAP11844 174 aa7.5□□□□□ -1.21
AP001029.1-201ENST00000589843 RNF151Q2KHN1 245 aa7.5□□□□□ -1.21
AP001029.1-201ENST00000589843 MRPL35Q9NZE8 188 aaKnown RBP7.5□□□□□ -1.21
AP001029.1-201ENST00000589843 C6orf48Q9UBA6 75 aa7.5□□□□□ -1.21
AP001029.1-201ENST00000589843 ALG5Q9Y673 324 aa7.5□□□□□ -1.21
AP001029.1-201ENST00000589843 FXYD6-FXYD2A0A087WZ82 144 aa7.49□□□□□ -1.21
AP001029.1-201ENST00000589843 CTRLP40313 264 aa7.49□□□□□ -1.21
AP001029.1-201ENST00000589843 UNQ6190/PRO20217Q6UXQ8 127 aa7.49□□□□□ -1.21
AP001029.1-201ENST00000589843 ORAOV1Q8WV07 137 aa7.49□□□□□ -1.21
AP001029.1-201ENST00000589843 S100ZQ8WXG8 99 aa7.49□□□□□ -1.21
AP001029.1-201ENST00000589843 IMMP2LQ96T52 175 aa7.49□□□□□ -1.21
AP001029.1-201ENST00000589843 C1orf196B1AJZ1 125 aa7.48□□□□□ -1.21
AP001029.1-201ENST00000589843 KRTAP13-2Q52LG2 175 aa7.48□□□□□ -1.21
AP001029.1-201ENST00000589843 LINC00173Q6ZV60 143 aa7.48□□□□□ -1.21
AP001029.1-201ENST00000589843 MRPL52Q86TS9 123 aaKnown RBP7.48□□□□□ -1.21
AP001029.1-201ENST00000589843 SFT2D1Q8WV19 159 aa7.48□□□□□ -1.21
AP001029.1-201ENST00000589843 SMDT1Q9H4I9 107 aa7.48□□□□□ -1.21
AP001029.1-201ENST00000589843 XKRY2A2RUG3 117 aa7.47□□□□□ -1.21
AP001029.1-201ENST00000589843 RAB19A4D1S5 217 aa7.47□□□□□ -1.21
AP001029.1-201ENST00000589843 Q6ZUT4 128 aa7.47□□□□□ -1.21
AP001029.1-201ENST00000589843 FAM213BQ8TBF2 198 aa7.47□□□□□ -1.21
AP001029.1-201ENST00000589843 C7orf77A4D0Y5 90 aa7.46□□□□□ -1.22
AP001029.1-201ENST00000589843 NDUFA1O15239 70 aa7.46□□□□□ -1.22
AP001029.1-201ENST00000589843 TLX1NBP0CAT3 122 aa7.46□□□□□ -1.22
AP001029.1-201ENST00000589843 C9orf129Q5T035 196 aaKnown RBP7.46□□□□□ -1.22
AP001029.1-201ENST00000589843 C9orf62Q8N4C0 152 aa7.46□□□□□ -1.22
AP001029.1-201ENST00000589843 KCNRGQ8N5I3 272 aa7.46□□□□□ -1.22
AP001029.1-201ENST00000589843 CTDSP1Q9GZU7 261 aa7.46□□□□□ -1.22
AP001029.1-201ENST00000589843 PPDPFQ9H3Y8 114 aa7.46□□□□□ -1.22
AP001029.1-201ENST00000589843 LINC00304Q8N9R0 145 aa7.45□□□□□ -1.22
AP001029.1-201ENST00000589843 CYTL1Q9NRR1 136 aa7.45□□□□□ -1.22
AP001029.1-201ENST00000589843 OR10D4PQ8NGN7 298 aa7.44□□□□□ -1.22
AP001029.1-201ENST00000589843 CNFNQ9BYD5 112 aa7.44□□□□□ -1.22
AP001029.1-201ENST00000589843 TRBV6-5A0A0K0K1A5 114 aa7.43□□□□□ -1.22
AP001029.1-201ENST00000589843 KRTAP9-7A8MTY7 169 aa7.43□□□□□ -1.22
AP001029.1-201ENST00000589843 LINC00242Q5T6M2 205 aa7.43□□□□□ -1.22
AP001029.1-201ENST00000589843 NUDT10Q8NFP7 164 aa7.43□□□□□ -1.22
AP001029.1-201ENST00000589843 MBD3L1Q8WWY6 194 aa7.43□□□□□ -1.22
AP001029.1-201ENST00000589843 C11orf52Q96A22 123 aa7.43□□□□□ -1.22
AP001029.1-201ENST00000589843 NUDT11Q96G61 164 aa7.43□□□□□ -1.22
AP001029.1-201ENST00000589843 ST20Q9HBF5 79 aa7.43□□□□□ -1.22
AP001029.1-201ENST00000589843 UBE2D4Q9Y2X8 147 aa7.43□□□□□ -1.22
AP001029.1-201ENST00000589843 TRBV20OR9-2A0A075B6H5 130 aa7.42□□□□□ -1.22
AP001029.1-201ENST00000589843 GNG4P50150 75 aa7.42□□□□□ -1.22
AP001029.1-201ENST00000589843 SMIM15Q7Z3B0 74 aa7.41□□□□□ -1.22
AP001029.1-201ENST00000589843 GNG13Q9P2W3 67 aa7.41□□□□□ -1.22
AP001029.1-201ENST00000589843 NUPR1O60356 82 aa7.4□□□□□ -1.22
AP001029.1-201ENST00000589843 POLR2KP53803 58 aaKnown RBP7.4□□□□□ -1.22
AP001029.1-201ENST00000589843 CCL20P78556 96 aa7.4□□□□□ -1.22
AP001029.1-201ENST00000589843 TMEM241Q24JQ0 296 aa7.4□□□□□ -1.22
AP001029.1-201ENST00000589843 ASB16-AS1Q495Z4 193 aa7.4□□□□□ -1.22
AP001029.1-201ENST00000589843 TEX261Q6UWH6 196 aa7.4□□□□□ -1.22
AP001029.1-201ENST00000589843 C2orf82Q6UX34 121 aa7.4□□□□□ -1.22
AP001029.1-201ENST00000589843 LINC00469Q8N7U9 141 aa7.4□□□□□ -1.22
AP001029.1-201ENST00000589843 ARPC5O15511 151 aa7.39□□□□□ -1.23
AP001029.1-201ENST00000589843 RPL28P46779 137 aaKnown RBP7.39□□□□□ -1.23
AP001029.1-201ENST00000589843 LCE2CQ5TA81 110 aa7.39□□□□□ -1.23
AP001029.1-201ENST00000589843 C22orf24Q9Y442 160 aa7.39□□□□□ -1.23
AP001029.1-201ENST00000589843 IGHV3OR16-9A0A0B4J2B5 98 aa7.38□□□□□ -1.23
AP001029.1-201ENST00000589843 NDUFC2-KCTD14E9PQ53 114 aa7.38□□□□□ -1.23
AP001029.1-201ENST00000589843 SMKR1H3BMG3 65 aa7.38□□□□□ -1.23
AP001029.1-201ENST00000589843 GIPP09681 153 aaPredicted RBP7.38□□□□□ -1.23
AP001029.1-201ENST00000589843 FCER1GP30273 86 aa7.38□□□□□ -1.23
AP001029.1-201ENST00000589843 TRBV27A0A0K0K1C4 114 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms