RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 TIMM17AQ99595 171 aa14.46□□□□□ -0.1
R3HDM4-204ENST00000589428 SPANXA1Q9NS26 97 aa14.46□□□□□ -0.1
R3HDM4-204ENST00000589428 FAM104AQ969W3 186 aa14.45□□□□□ -0.1
R3HDM4-204ENST00000589428 TIMM21Q9BVV7 248 aa14.45□□□□□ -0.1
R3HDM4-204ENST00000589428 PYGO1Q9Y3Y4 419 aa14.45□□□□□ -0.1
R3HDM4-204ENST00000589428 ATP5LO75964 103 aa14.44□□□□□ -0.1
R3HDM4-204ENST00000589428 IFI27L1Q96BM0 104 aa14.44□□□□□ -0.1
R3HDM4-204ENST00000589428 OPRPNQ99935 248 aaPredicted RBP14.44□□□□□ -0.1
R3HDM4-204ENST00000589428 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.44□□□□□ -0.1
R3HDM4-204ENST00000589428 DNAH10OSP0CZ25 163 aa14.44□□□□□ -0.1
R3HDM4-204ENST00000589428 MPV17L2Q567V2 206 aa14.44□□□□□ -0.1
R3HDM4-204ENST00000589428 AMMECR1LQ6DCA0 310 aa14.44□□□□□ -0.1
R3HDM4-204ENST00000589428 Q8N3U1 123 aa14.44□□□□□ -0.1
R3HDM4-204ENST00000589428 TRAV9-2A0A087WT02 112 aa14.43□□□□□ -0.1
R3HDM4-204ENST00000589428 TMEM141Q96I45 108 aa14.43□□□□□ -0.1
R3HDM4-204ENST00000589428 IGLV4-3A0A075B6K6 122 aa14.42□□□□□ -0.1
R3HDM4-204ENST00000589428 TMEM262E9PQX1 116 aa14.42□□□□□ -0.1
R3HDM4-204ENST00000589428 AKR1D1P51857 326 aa14.42□□□□□ -0.1
R3HDM4-204ENST00000589428 Q6ZUT4 128 aa14.42□□□□□ -0.1
R3HDM4-204ENST00000589428 Q8N976 141 aa14.42□□□□□ -0.1
R3HDM4-204ENST00000589428 OR10D4PQ8NGN7 298 aa14.42□□□□□ -0.1
R3HDM4-204ENST00000589428 CSDC2Q9Y534 153 aaKnown RBP14.42□□□□□ -0.1
R3HDM4-204ENST00000589428 ZNF25P17030 456 aaPredicted RBP14.41□□□□□ -0.1
R3HDM4-204ENST00000589428 KRTAP1-5Q9BYS1 174 aa14.41□□□□□ -0.1
R3HDM4-204ENST00000589428 DNAH2Q9P225 4427 aa14.41□□□□□ -0.1
R3HDM4-204ENST00000589428 IGLV4-60A0A075B6I1 120 aa14.41□□□□□ -0.1
R3HDM4-204ENST00000589428 K7EP13 123 aa14.41□□□□□ -0.1
R3HDM4-204ENST00000589428 RBX1P62877 108 aa14.41□□□□□ -0.1
R3HDM4-204ENST00000589428 SMAGPQ0VAQ4 97 aa14.41□□□□□ -0.1
R3HDM4-204ENST00000589428 C1orf134Q5TEV5 83 aa14.41□□□□□ -0.1
R3HDM4-204ENST00000589428 OR5A1Q8NGJ0 315 aa14.41□□□□□ -0.1
R3HDM4-204ENST00000589428 C3orf79P0CE67 100 aa14.4□□□□□ -0.1
R3HDM4-204ENST00000589428 KRTDAPP60985 99 aa14.4□□□□□ -0.1
R3HDM4-204ENST00000589428 RNASE13Q5GAN3 156 aaKnown RBP14.4□□□□□ -0.1
R3HDM4-204ENST00000589428 LINC01556Q5JQF7 62 aa14.4□□□□□ -0.1
R3HDM4-204ENST00000589428 DGAT2L7PQ6IED9 249 aa14.4□□□□□ -0.1
R3HDM4-204ENST00000589428 BAALCQ8WXS3 180 aa14.4□□□□□ -0.1
R3HDM4-204ENST00000589428 DNAH10Q8IVF4 4471 aa14.39□□□□□ -0.11
R3HDM4-204ENST00000589428 A0A1B0GUV1 79 aa14.39□□□□□ -0.11
R3HDM4-204ENST00000589428 NPSP0C0P6 89 aa14.39□□□□□ -0.11
R3HDM4-204ENST00000589428 MRPS36P82909 103 aaKnown RBP14.39□□□□□ -0.11
R3HDM4-204ENST00000589428 Q6ZN92 141 aa14.39□□□□□ -0.11
R3HDM4-204ENST00000589428 C10orf126Q8N4M7 172 aa14.39□□□□□ -0.11
R3HDM4-204ENST00000589428 TMEM101Q96IK0 257 aa14.39□□□□□ -0.11
R3HDM4-204ENST00000589428 MAP1LC3CQ9BXW4 147 aa14.39□□□□□ -0.11
R3HDM4-204ENST00000589428 A0A087WX48 190 aa14.38□□□□□ -0.11
R3HDM4-204ENST00000589428 PKIAP61925 76 aa14.38□□□□□ -0.11
R3HDM4-204ENST00000589428 ZC2HC1BQ5TFG8 222 aa14.38□□□□□ -0.11
R3HDM4-204ENST00000589428 C6orf223Q8N319 242 aa14.38□□□□□ -0.11
R3HDM4-204ENST00000589428 CDC42SE2Q9NRR3 84 aa14.38□□□□□ -0.11
R3HDM4-204ENST00000589428 H0Y8G0 127 aa14.38□□□□□ -0.11
R3HDM4-204ENST00000589428 SYS1-DBNDD2H3BUS1 97 aa14.38□□□□□ -0.11
R3HDM4-204ENST00000589428 IGHV3-30P01768 117 aa14.37□□□□□ -0.11
R3HDM4-204ENST00000589428 IGHV3-33P01772 117 aa14.37□□□□□ -0.11
R3HDM4-204ENST00000589428 IGHV3-30-3P0DP02 117 aa14.37□□□□□ -0.11
R3HDM4-204ENST00000589428 IGHV3-30-5P0DP03 117 aa14.37□□□□□ -0.11
R3HDM4-204ENST00000589428 SPATA12Q7Z6I5 190 aa14.37□□□□□ -0.11
R3HDM4-204ENST00000589428 ZNF664Q8N3J9 261 aa14.37□□□□□ -0.11
R3HDM4-204ENST00000589428 PRSS1P07477 247 aa14.36□□□□□ -0.11
R3HDM4-204ENST00000589428 PAPPA-AS1Q5QFB9 102 aa14.35□□□□□ -0.11
R3HDM4-204ENST00000589428 AMELXQ99217 191 aa14.35□□□□□ -0.11
R3HDM4-204ENST00000589428 VCX2Q9H322 139 aa14.35□□□□□ -0.11
R3HDM4-204ENST00000589428 PMVKQ15126 192 aa14.34□□□□□ -0.11
R3HDM4-204ENST00000589428 TEX43Q6ZNM6 134 aa14.34□□□□□ -0.11
R3HDM4-204ENST00000589428 CST9LQ9H4G1 147 aa14.34□□□□□ -0.11
R3HDM4-204ENST00000589428 FRAS1Q86XX4 4008 aa14.34□□□□□ -0.11
R3HDM4-204ENST00000589428 PRSS29PA6NIE9 313 aa14.33□□□□□ -0.12
R3HDM4-204ENST00000589428 RTL8CO15255 209 aa14.33□□□□□ -0.12
R3HDM4-204ENST00000589428 LINC00336Q6ZUF6 198 aa14.33□□□□□ -0.12
R3HDM4-204ENST00000589428 TRAV12-1A0A0B4J245 112 aa14.32□□□□□ -0.12
R3HDM4-204ENST00000589428 ANGP03950 147 aaKnown RBP14.32□□□□□ -0.12
R3HDM4-204ENST00000589428 PET117Q6UWS5 81 aa14.32□□□□□ -0.12
R3HDM4-204ENST00000589428 ODF1Q14990 250 aa14.32□□□□□ -0.12
R3HDM4-204ENST00000589428 PMCHL2Q9BQD1 86 aa14.31□□□□□ -0.12
R3HDM4-204ENST00000589428 LINC01545Q5VT33 79 aa14.3□□□□□ -0.12
R3HDM4-204ENST00000589428 CLPSL2Q6UWE3 100 aa14.3□□□□□ -0.12
R3HDM4-204ENST00000589428 NFE4Q86UQ8 179 aa14.3□□□□□ -0.12
R3HDM4-204ENST00000589428 LINC00518Q8N0U6 118 aa14.3□□□□□ -0.12
R3HDM4-204ENST00000589428 LINC00269Q8N2A0 174 aa14.3□□□□□ -0.12
R3HDM4-204ENST00000589428 IBA57-AS1B1ANH7 110 aa14.29□□□□□ -0.12
R3HDM4-204ENST00000589428 C2orf88Q9BSF0 95 aa14.29□□□□□ -0.12
R3HDM4-204ENST00000589428 KLK12Q9UKR0 248 aa14.29□□□□□ -0.12
R3HDM4-204ENST00000589428 MRPL35Q9NZE8 188 aaKnown RBP14.29□□□□□ -0.12
R3HDM4-204ENST00000589428 IGKV3OR2-268A0A0C4DH90 116 aa14.28□□□□□ -0.12
R3HDM4-204ENST00000589428 CHTOPQ9Y3Y2 248 aaKnown RBP14.28□□□□□ -0.12
R3HDM4-204ENST00000589428 TRAV13-1A0A0B4J241 112 aa14.27□□□□□ -0.12
R3HDM4-204ENST00000589428 UBE2D1P51668 147 aa14.27□□□□□ -0.12
R3HDM4-204ENST00000589428 PRR34Q9NV39 138 aa14.27□□□□□ -0.12
R3HDM4-204ENST00000589428 DNAH17Q9UFH2 4485 aa14.27□□□□□ -0.12
R3HDM4-204ENST00000589428 IGLV4-69A0A075B6H9 119 aa14.27□□□□□ -0.13
R3HDM4-204ENST00000589428 F8VRH5 84 aa14.27□□□□□ -0.13
R3HDM4-204ENST00000589428 REG3AQ06141 175 aa14.27□□□□□ -0.13
R3HDM4-204ENST00000589428 C20orf202A1L168 122 aa14.26□□□□□ -0.13
R3HDM4-204ENST00000589428 SCGB1D1O95968 90 aa14.26□□□□□ -0.13
R3HDM4-204ENST00000589428 JOSD1Q15040 202 aaPredicted RBP14.26□□□□□ -0.13
R3HDM4-204ENST00000589428 PYY3Q5JQD4 70 aa14.26□□□□□ -0.13
R3HDM4-204ENST00000589428 Q9HAA7 133 aa14.26□□□□□ -0.13
R3HDM4-204ENST00000589428 FAT2Q9NYQ8 4349 aa14.25□□□□□ -0.13
R3HDM4-204ENST00000589428 A0A0J9YXV3 536 aa14.24□□□□□ -0.13
R3HDM4-204ENST00000589428 SMIM6P0DI80 62 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms