RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 KIF25-AS1Q9Y6Z4 181 aa12.42□□□□□ -0.42
DNMT1-215ENST00000588913 PMVKQ15126 192 aa12.41□□□□□ -0.42
DNMT1-215ENST00000588913 GAGE13Q4V321 117 aa12.41□□□□□ -0.42
DNMT1-215ENST00000588913 RPL39LQ96EH5 51 aaKnown RBP12.41□□□□□ -0.42
DNMT1-215ENST00000588913 PRADC1Q9BSG0 188 aa12.41□□□□□ -0.42
DNMT1-215ENST00000588913 SPART-AS1P0CW21 52 aa12.41□□□□□ -0.42
DNMT1-215ENST00000588913 POLR2KP53803 58 aaKnown RBP12.41□□□□□ -0.42
DNMT1-215ENST00000588913 NUPR2A6NF83 97 aa12.4□□□□□ -0.42
DNMT1-215ENST00000588913 ZNF815PA8K554 130 aa12.4□□□□□ -0.42
DNMT1-215ENST00000588913 SCGB1D4Q6XE38 83 aa12.4□□□□□ -0.42
DNMT1-215ENST00000588913 KMT2AQ03164 3969 aa12.39□□□□□ -0.43
DNMT1-215ENST00000588913 C11orf72Q8NBR9 251 aa12.39□□□□□ -0.43
DNMT1-215ENST00000588913 TMEM263Q8WUH6 116 aaKnown RBP12.39□□□□□ -0.43
DNMT1-215ENST00000588913 GNRH2O43555 120 aa12.38□□□□□ -0.43
DNMT1-215ENST00000588913 LINC00315P59091 139 aa12.38□□□□□ -0.43
DNMT1-215ENST00000588913 RHOHQ15669 191 aa12.38□□□□□ -0.43
DNMT1-215ENST00000588913 ATP6V0E2Q8NHE4 81 aa12.38□□□□□ -0.43
DNMT1-215ENST00000588913 C16orf74Q96GX8 76 aa12.38□□□□□ -0.43
DNMT1-215ENST00000588913 NOP10Q9NPE3 64 aaKnown RBP12.38□□□□□ -0.43
DNMT1-215ENST00000588913 SPANXB1Q9NS25 103 aaPredicted RBP12.38□□□□□ -0.43
DNMT1-215ENST00000588913 TRBV27A0A0K0K1C4 114 aa12.38□□□□□ -0.43
DNMT1-215ENST00000588913 LCE6AA0A183 80 aa12.38□□□□□ -0.43
DNMT1-215ENST00000588913 TEX48A0A1B0GUV7 120 aa12.38□□□□□ -0.43
DNMT1-215ENST00000588913 IGIPA6NJ69 53 aa12.38□□□□□ -0.43
DNMT1-215ENST00000588913 C11orf86A6NJI1 115 aa12.38□□□□□ -0.43
DNMT1-215ENST00000588913 SRSF9Q13242 221 aaKnown RBP eCLIP12.38□□□□□ -0.43
DNMT1-215ENST00000588913 ZFP2Q6ZN57 461 aa12.38□□□□□ -0.43
DNMT1-215ENST00000588913 SIGMAR1Q99720 223 aa12.37□□□□□ -0.43
DNMT1-215ENST00000588913 DEFB131BA0A096LNP1 70 aa12.36□□□□□ -0.43
DNMT1-215ENST00000588913 TRAV10A0A0B4J240 114 aa12.36□□□□□ -0.43
DNMT1-215ENST00000588913 DEFB130BP0DP73 79 aa12.36□□□□□ -0.43
DNMT1-215ENST00000588913 DEFB130AP0DP74 79 aa12.36□□□□□ -0.43
DNMT1-215ENST00000588913 UBE2D1P51668 147 aa12.36□□□□□ -0.43
DNMT1-215ENST00000588913 LINC00467Q9BRT7 94 aa12.36□□□□□ -0.43
DNMT1-215ENST00000588913 VCX2Q9H322 139 aa12.36□□□□□ -0.43
DNMT1-215ENST00000588913 IGHV1OR15-1A0A075B7D0 117 aa12.35□□□□□ -0.43
DNMT1-215ENST00000588913 APLNQ9ULZ1 77 aa12.35□□□□□ -0.43
DNMT1-215ENST00000588913 LYRM9A8MSI8 78 aa12.35□□□□□ -0.43
DNMT1-215ENST00000588913 DAD1P61803 113 aa12.35□□□□□ -0.43
DNMT1-215ENST00000588913 SUMO4Q6EEV6 95 aa12.35□□□□□ -0.43
DNMT1-215ENST00000588913 LINC00612Q8N6U2 182 aa12.35□□□□□ -0.43
DNMT1-215ENST00000588913 C9orf85Q96MD7 179 aa12.35□□□□□ -0.43
DNMT1-215ENST00000588913 MRPL16Q9NX20 251 aaKnown RBP12.35□□□□□ -0.43
DNMT1-215ENST00000588913 TRBV20-1A0A075B6N2 111 aa12.34□□□□□ -0.43
DNMT1-215ENST00000588913 TMEM238C9JI98 176 aa12.34□□□□□ -0.43
DNMT1-215ENST00000588913 HTN3P15516 51 aa12.34□□□□□ -0.43
DNMT1-215ENST00000588913 Q6ZTI0 123 aa12.34□□□□□ -0.43
DNMT1-215ENST00000588913 H3BMG7 143 aa12.33□□□□□ -0.44
DNMT1-215ENST00000588913 CRYGDP07320 174 aa12.33□□□□□ -0.44
DNMT1-215ENST00000588913 ZNF876PQ49A33 203 aa12.33□□□□□ -0.44
DNMT1-215ENST00000588913 MDFICQ9P1T7 246 aa12.33□□□□□ -0.44
DNMT1-215ENST00000588913 KLK5Q9Y337 293 aaPredicted RBP12.33□□□□□ -0.44
DNMT1-215ENST00000588913 IGLV4-69A0A075B6H9 119 aa12.33□□□□□ -0.44
DNMT1-215ENST00000588913 SDHAF1A6NFY7 115 aa12.33□□□□□ -0.44
DNMT1-215ENST00000588913 F5H697 171 aa12.33□□□□□ -0.44
DNMT1-215ENST00000588913 NFE4Q86UQ8 179 aa12.33□□□□□ -0.44
DNMT1-215ENST00000588913 PGPEP1Q9NXJ5 209 aa12.33□□□□□ -0.44
DNMT1-215ENST00000588913 DNAH6Q9C0G6 4158 aa12.33□□□□□ -0.44
DNMT1-215ENST00000588913 WFDC2Q14508 124 aa12.32□□□□□ -0.44
DNMT1-215ENST00000588913 LINC00476Q8WZB0 136 aa12.32□□□□□ -0.44
DNMT1-215ENST00000588913 PRO0461Q9UI25 63 aa12.32□□□□□ -0.44
DNMT1-215ENST00000588913 IGHV3-16A0A0C4DH30 117 aa12.31□□□□□ -0.44
DNMT1-215ENST00000588913 GAGE12HA6NDE8 117 aa12.31□□□□□ -0.44
DNMT1-215ENST00000588913 GAGE7O76087 117 aa12.31□□□□□ -0.44
DNMT1-215ENST00000588913 GAGE12FP0CL80 117 aa12.31□□□□□ -0.44
DNMT1-215ENST00000588913 GAGE12GP0CL81 117 aa12.31□□□□□ -0.44
DNMT1-215ENST00000588913 GAGE12IP0CL82 117 aa12.31□□□□□ -0.44
DNMT1-215ENST00000588913 SLC25A29Q8N8R3 303 aa12.31□□□□□ -0.44
DNMT1-215ENST00000588913 TRGV11A0A075B6L2 103 aa12.3□□□□□ -0.44
DNMT1-215ENST00000588913 A0A0J9YY99 117 aa12.3□□□□□ -0.44
DNMT1-215ENST00000588913 TSHBP01222 138 aa12.3□□□□□ -0.44
DNMT1-215ENST00000588913 CRYBA4P53673 196 aa12.3□□□□□ -0.44
DNMT1-215ENST00000588913 DAZ2Q13117 558 aaKnown RBP12.3□□□□□ -0.44
DNMT1-215ENST00000588913 LGALS3P17931 250 aaKnown RBP12.29□□□□□ -0.44
DNMT1-215ENST00000588913 UBE2D3P61077 147 aa12.29□□□□□ -0.44
DNMT1-215ENST00000588913 UBE2D2P62837 147 aa12.29□□□□□ -0.44
DNMT1-215ENST00000588913 I3L3M4 83 aa12.28□□□□□ -0.44
DNMT1-215ENST00000588913 M0QY20 66 aa12.28□□□□□ -0.44
DNMT1-215ENST00000588913 LEPROTO15243 131 aa12.28□□□□□ -0.44
DNMT1-215ENST00000588913 ETDBQ3ZM63 59 aa12.28□□□□□ -0.44
DNMT1-215ENST00000588913 PIK3CD-AS1Q5SR53 167 aa12.28□□□□□ -0.44
DNMT1-215ENST00000588913 TMEM170BQ5T4T1 132 aa12.28□□□□□ -0.44
DNMT1-215ENST00000588913 CFAP126Q5VTH2 177 aa12.28□□□□□ -0.44
DNMT1-215ENST00000588913 PLEKHB2Q96CS7 222 aa12.28□□□□□ -0.44
DNMT1-215ENST00000588913 MUC4Q99102 2169 aa12.27□□□□□ -0.45
DNMT1-215ENST00000588913 TRGV1A0A0A0MS02 117 aa12.27□□□□□ -0.45
DNMT1-215ENST00000588913 J3QQQ9 107 aa12.27□□□□□ -0.45
DNMT1-215ENST00000588913 APOMO95445 188 aa12.27□□□□□ -0.45
DNMT1-215ENST00000588913 LY6G6CO95867 125 aa12.27□□□□□ -0.45
DNMT1-215ENST00000588913 M0QXV9 152 aa12.26□□□□□ -0.45
DNMT1-215ENST00000588913 TSPAN13O95857 204 aa12.26□□□□□ -0.45
DNMT1-215ENST00000588913 ZNF56Q15929 161 aa12.26□□□□□ -0.45
DNMT1-215ENST00000588913 A0A087WWL8 130 aa12.25□□□□□ -0.45
DNMT1-215ENST00000588913 F5H768 121 aa12.25□□□□□ -0.45
DNMT1-215ENST00000588913 IGHV3-30P01768 117 aa12.25□□□□□ -0.45
DNMT1-215ENST00000588913 IGHV3-30-5P0DP03 117 aa12.25□□□□□ -0.45
DNMT1-215ENST00000588913 ZNF415Q09FC8 603 aa12.25□□□□□ -0.45
DNMT1-215ENST00000588913 PYGO1Q9Y3Y4 419 aa12.25□□□□□ -0.45
DNMT1-215ENST00000588913 DNAH2Q9P225 4427 aa12.25□□□□□ -0.45
DNMT1-215ENST00000588913 ATP5G1P05496 136 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms