RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 TMEM141Q96I45 108 aa11.52□□□□□ -0.57
SCAMP4-211ENST00000588907 NBDYA0A0U1RRE5 68 aa11.51□□□□□ -0.57
SCAMP4-211ENST00000588907 CRPP02741 224 aa11.51□□□□□ -0.57
SCAMP4-211ENST00000588907 NDUFA6P56556 154 aa11.51□□□□□ -0.57
SCAMP4-211ENST00000588907 ZNF664Q8N3J9 261 aa11.51□□□□□ -0.57
SCAMP4-211ENST00000588907 SCGB3A1Q96QR1 104 aa11.51□□□□□ -0.57
SCAMP4-211ENST00000588907 ATP5LO75964 103 aa11.5□□□□□ -0.57
SCAMP4-211ENST00000588907 LINC00310P59036 64 aa11.5□□□□□ -0.57
SCAMP4-211ENST00000588907 Q8N976 141 aa11.5□□□□□ -0.57
SCAMP4-211ENST00000588907 CDC42SE2Q9NRR3 84 aa11.5□□□□□ -0.57
SCAMP4-211ENST00000588907 IGLV4-60A0A075B6I1 120 aa11.49□□□□□ -0.57
SCAMP4-211ENST00000588907 A0A096LNJ9 63 aa11.49□□□□□ -0.57
SCAMP4-211ENST00000588907 TRAV8-3A0A0A6YYJ7 113 aa11.49□□□□□ -0.57
SCAMP4-211ENST00000588907 IGIPA6NJ69 53 aa11.49□□□□□ -0.57
SCAMP4-211ENST00000588907 IBA57-AS1B1ANH7 110 aa11.49□□□□□ -0.57
SCAMP4-211ENST00000588907 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.49□□□□□ -0.57
SCAMP4-211ENST00000588907 PACRGQ96M98 296 aaPredicted RBP11.49□□□□□ -0.57
SCAMP4-211ENST00000588907 KLK12Q9UKR0 248 aa11.49□□□□□ -0.57
SCAMP4-211ENST00000588907 SACSQ9NZJ4 4579 aa11.48□□□□□ -0.57
SCAMP4-211ENST00000588907 CCL25O15444 150 aa11.48□□□□□ -0.57
SCAMP4-211ENST00000588907 PMCHL1Q16048 86 aa11.48□□□□□ -0.57
SCAMP4-211ENST00000588907 MIAQ16674 131 aa11.48□□□□□ -0.57
SCAMP4-211ENST00000588907 PDZD11Q5EBL8 140 aa11.48□□□□□ -0.57
SCAMP4-211ENST00000588907 PRR34Q9NV39 138 aa11.48□□□□□ -0.57
SCAMP4-211ENST00000588907 HSPB8Q9UJY1 196 aa11.48□□□□□ -0.57
SCAMP4-211ENST00000588907 KMT2AQ03164 3969 aa11.47□□□□□ -0.57
SCAMP4-211ENST00000588907 IGLV4-3A0A075B6K6 122 aa11.47□□□□□ -0.57
SCAMP4-211ENST00000588907 REG3AQ06141 175 aa11.47□□□□□ -0.57
SCAMP4-211ENST00000588907 TEX43Q6ZNM6 134 aa11.47□□□□□ -0.57
SCAMP4-211ENST00000588907 NFE4Q86UQ8 179 aa11.47□□□□□ -0.57
SCAMP4-211ENST00000588907 LINC00269Q8N2A0 174 aa11.47□□□□□ -0.57
SCAMP4-211ENST00000588907 Q8N3U1 123 aa11.47□□□□□ -0.57
SCAMP4-211ENST00000588907 RMI2Q96E14 147 aa11.47□□□□□ -0.57
SCAMP4-211ENST00000588907 C2orf88Q9BSF0 95 aa11.47□□□□□ -0.57
SCAMP4-211ENST00000588907 TRAV8-4A0A0B4J246 113 aa11.46□□□□□ -0.57
SCAMP4-211ENST00000588907 LEPROTL1O95214 131 aa11.46□□□□□ -0.57
SCAMP4-211ENST00000588907 Q6ZUT4 128 aa11.46□□□□□ -0.57
SCAMP4-211ENST00000588907 FAM19A2Q8N3H0 131 aa11.46□□□□□ -0.57
SCAMP4-211ENST00000588907 VCX2Q9H322 139 aa11.46□□□□□ -0.57
SCAMP4-211ENST00000588907 UBE2WQ96B02 151 aa11.45□□□□□ -0.58
SCAMP4-211ENST00000588907 COX11Q9Y6N1 276 aa11.45□□□□□ -0.58
SCAMP4-211ENST00000588907 NUPR1O60356 82 aa11.44□□□□□ -0.58
SCAMP4-211ENST00000588907 Q6ZR54 194 aa11.44□□□□□ -0.58
SCAMP4-211ENST00000588907 IFITM10A6NMD0 228 aa11.43□□□□□ -0.58
SCAMP4-211ENST00000588907 S100A2P29034 98 aa11.43□□□□□ -0.58
SCAMP4-211ENST00000588907 IFI27L1Q96BM0 104 aa11.43□□□□□ -0.58
SCAMP4-211ENST00000588907 AMELXQ99217 191 aa11.43□□□□□ -0.58
SCAMP4-211ENST00000588907 SS18Q15532 418 aa11.42□□□□□ -0.58
SCAMP4-211ENST00000588907 ENHOQ6UWT2 76 aa11.42□□□□□ -0.58
SCAMP4-211ENST00000588907 C1orf43Q9BWL3 253 aa11.42□□□□□ -0.58
SCAMP4-211ENST00000588907 TM2D2Q9BX73 214 aa11.42□□□□□ -0.58
SCAMP4-211ENST00000588907 KRTAP1-5Q9BYS1 174 aa11.42□□□□□ -0.58
SCAMP4-211ENST00000588907 SEC11AP67812 179 aa11.41□□□□□ -0.58
SCAMP4-211ENST00000588907 PMVKQ15126 192 aa11.41□□□□□ -0.58
SCAMP4-211ENST00000588907 CLPSL2Q6UWE3 100 aa11.41□□□□□ -0.58
SCAMP4-211ENST00000588907 BAALCQ8WXS3 180 aa11.41□□□□□ -0.58
SCAMP4-211ENST00000588907 LINC00959A0A1B0GUT2 108 aa11.4□□□□□ -0.58
SCAMP4-211ENST00000588907 C6orf223Q8N319 242 aa11.4□□□□□ -0.58
SCAMP4-211ENST00000588907 FAM104AQ969W3 186 aa11.4□□□□□ -0.58
SCAMP4-211ENST00000588907 OPRPNQ99935 248 aaPredicted RBP11.4□□□□□ -0.58
SCAMP4-211ENST00000588907 MAP1LC3CQ9BXW4 147 aa11.4□□□□□ -0.58
SCAMP4-211ENST00000588907 Q9HAA7 133 aa11.4□□□□□ -0.58
SCAMP4-211ENST00000588907 IGKV3OR2-268A0A0C4DH90 116 aa11.39□□□□□ -0.59
SCAMP4-211ENST00000588907 C5orf52A6NGY3 159 aa11.39□□□□□ -0.59
SCAMP4-211ENST00000588907 M0R2N4 97 aa11.39□□□□□ -0.59
SCAMP4-211ENST00000588907 PRSS1P07477 247 aa11.39□□□□□ -0.59
SCAMP4-211ENST00000588907 FABP4P15090 132 aa11.39□□□□□ -0.59
SCAMP4-211ENST00000588907 RNASE13Q5GAN3 156 aaKnown RBP11.39□□□□□ -0.59
SCAMP4-211ENST00000588907 C1orf134Q5TEV5 83 aa11.39□□□□□ -0.59
SCAMP4-211ENST00000588907 HIST3H2BBQ8N257 126 aa11.39□□□□□ -0.59
SCAMP4-211ENST00000588907 CST9LQ9H4G1 147 aa11.39□□□□□ -0.59
SCAMP4-211ENST00000588907 TRAV13-1A0A0B4J241 112 aa11.38□□□□□ -0.59
SCAMP4-211ENST00000588907 TRAV12-1A0A0B4J245 112 aa11.38□□□□□ -0.59
SCAMP4-211ENST00000588907 LINC00173Q6ZV60 143 aa11.38□□□□□ -0.59
SCAMP4-211ENST00000588907 KMT2CQ8NEZ4 4911 aaKnown RBP11.37□□□□□ -0.59
SCAMP4-211ENST00000588907 IGKV2D-24A0A075B6R9 120 aa11.37□□□□□ -0.59
SCAMP4-211ENST00000588907 UBE2D1P51668 147 aa11.37□□□□□ -0.59
SCAMP4-211ENST00000588907 SNRPEP62304 92 aaKnown RBP11.37□□□□□ -0.59
SCAMP4-211ENST00000588907 FAM19A3Q7Z5A8 133 aa11.37□□□□□ -0.59
SCAMP4-211ENST00000588907 HYDINQ4G0P3 5121 aa11.37□□□□□ -0.59
SCAMP4-211ENST00000588907 HERVK_113P63121 156 aa11.36□□□□□ -0.59
SCAMP4-211ENST00000588907 CD164L2Q6UWJ8 174 aa11.36□□□□□ -0.59
SCAMP4-211ENST00000588907 CHCHD10Q8WYQ3 142 aaPredicted RBP11.36□□□□□ -0.59
SCAMP4-211ENST00000588907 TMA7Q9Y2S6 64 aaKnown RBP11.36□□□□□ -0.59
SCAMP4-211ENST00000588907 PRSS29PA6NIE9 313 aa11.35□□□□□ -0.59
SCAMP4-211ENST00000588907 PSCAO43653 123 aa11.35□□□□□ -0.59
SCAMP4-211ENST00000588907 IGLV10-54A0A075B6I4 117 aa11.34□□□□□ -0.59
SCAMP4-211ENST00000588907 SPATA12Q7Z6I5 190 aa11.34□□□□□ -0.59
SCAMP4-211ENST00000588907 HIST1H2BLQ99880 126 aa11.34□□□□□ -0.59
SCAMP4-211ENST00000588907 GEMIN7Q9H840 131 aaKnown RBP11.34□□□□□ -0.59
SCAMP4-211ENST00000588907 TINCRA0A1B0GVN0 87 aa11.33□□□□□ -0.6
SCAMP4-211ENST00000588907 XCL1P47992 114 aa11.33□□□□□ -0.6
SCAMP4-211ENST00000588907 AKR1D1P51857 326 aa11.33□□□□□ -0.6
SCAMP4-211ENST00000588907 CHTOPQ9Y3Y2 248 aaKnown RBP11.33□□□□□ -0.6
SCAMP4-211ENST00000588907 DNAH2Q9P225 4427 aa11.32□□□□□ -0.6
SCAMP4-211ENST00000588907 F8VRH5 84 aa11.32□□□□□ -0.6
SCAMP4-211ENST00000588907 LINC00242Q5T6M2 205 aa11.32□□□□□ -0.6
SCAMP4-211ENST00000588907 ZC2HC1BQ5TFG8 222 aa11.32□□□□□ -0.6
SCAMP4-211ENST00000588907 PET117Q6UWS5 81 aa11.32□□□□□ -0.6
SCAMP4-211ENST00000588907 C20orf202A1L168 122 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms