RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 C3orf79P0CE67 100 aa9.93□□□□□ -0.82
NPC1-207ENST00000588867 TCTAP57738 103 aa9.93□□□□□ -0.82
NPC1-207ENST00000588867 TIMM21Q9BVV7 248 aa9.93□□□□□ -0.82
NPC1-207ENST00000588867 IGLV4-3A0A075B6K6 122 aa9.92□□□□□ -0.82
NPC1-207ENST00000588867 ZC2HC1BQ5TFG8 222 aa9.92□□□□□ -0.82
NPC1-207ENST00000588867 Q8N3U1 123 aa9.92□□□□□ -0.82
NPC1-207ENST00000588867 IGLV4-60A0A075B6I1 120 aa9.92□□□□□ -0.82
NPC1-207ENST00000588867 ZNF25P17030 456 aaPredicted RBP9.92□□□□□ -0.82
NPC1-207ENST00000588867 RBX1P62877 108 aa9.92□□□□□ -0.82
NPC1-207ENST00000588867 Q6ZUT4 128 aa9.92□□□□□ -0.82
NPC1-207ENST00000588867 UBE2DNLQ8IWF7 75 aa9.92□□□□□ -0.82
NPC1-207ENST00000588867 BAALCQ8WXS3 180 aa9.92□□□□□ -0.82
NPC1-207ENST00000588867 VCX2Q9H322 139 aa9.92□□□□□ -0.82
NPC1-207ENST00000588867 CSDC2Q9Y534 153 aaKnown RBP9.92□□□□□ -0.82
NPC1-207ENST00000588867 IGHV3-30P01768 117 aa9.91□□□□□ -0.82
NPC1-207ENST00000588867 IGHV3-33P01772 117 aa9.91□□□□□ -0.82
NPC1-207ENST00000588867 IGHV3-30-3P0DP02 117 aa9.91□□□□□ -0.82
NPC1-207ENST00000588867 IGHV3-30-5P0DP03 117 aa9.91□□□□□ -0.82
NPC1-207ENST00000588867 ZNF664Q8N3J9 261 aa9.91□□□□□ -0.82
NPC1-207ENST00000588867 MRPS16Q9Y3D3 137 aaKnown RBP9.91□□□□□ -0.82
NPC1-207ENST00000588867 A0A1B0GUV1 79 aa9.9□□□□□ -0.82
NPC1-207ENST00000588867 SYS1-DBNDD2H3BUS1 97 aa9.9□□□□□ -0.82
NPC1-207ENST00000588867 PKIAP61925 76 aa9.9□□□□□ -0.82
NPC1-207ENST00000588867 PAPPA-AS1Q5QFB9 102 aa9.9□□□□□ -0.82
NPC1-207ENST00000588867 FAM104AQ969W3 186 aa9.9□□□□□ -0.82
NPC1-207ENST00000588867 CDC42SE2Q9NRR3 84 aa9.9□□□□□ -0.82
NPC1-207ENST00000588867 CSMD3Q7Z407 3707 aa9.9□□□□□ -0.82
NPC1-207ENST00000588867 ANGP03950 147 aaKnown RBP9.89□□□□□ -0.83
NPC1-207ENST00000588867 MRPS36P82909 103 aaKnown RBP9.89□□□□□ -0.83
NPC1-207ENST00000588867 PMVKQ15126 192 aa9.89□□□□□ -0.83
NPC1-207ENST00000588867 TEX43Q6ZNM6 134 aa9.89□□□□□ -0.83
NPC1-207ENST00000588867 IGKV3OR2-268A0A0C4DH90 116 aa9.89□□□□□ -0.83
NPC1-207ENST00000588867 NPSP0C0P6 89 aa9.89□□□□□ -0.83
NPC1-207ENST00000588867 PRSS29PA6NIE9 313 aa9.88□□□□□ -0.83
NPC1-207ENST00000588867 SIVA1O15304 175 aa9.88□□□□□ -0.83
NPC1-207ENST00000588867 CASC10Q5T4H9 136 aa9.88□□□□□ -0.83
NPC1-207ENST00000588867 SPATA12Q7Z6I5 190 aa9.88□□□□□ -0.83
NPC1-207ENST00000588867 CST9LQ9H4G1 147 aa9.88□□□□□ -0.83
NPC1-207ENST00000588867 DNAH7Q8WXX0 4024 aa9.88□□□□□ -0.83
NPC1-207ENST00000588867 PET117Q6UWS5 81 aa9.87□□□□□ -0.83
NPC1-207ENST00000588867 PMCHL2Q9BQD1 86 aa9.87□□□□□ -0.83
NPC1-207ENST00000588867 SCGB1D1O95968 90 aa9.87□□□□□ -0.83
NPC1-207ENST00000588867 CLPSL2Q6UWE3 100 aa9.87□□□□□ -0.83
NPC1-207ENST00000588867 LINC00269Q8N2A0 174 aa9.87□□□□□ -0.83
NPC1-207ENST00000588867 AMELXQ99217 191 aa9.87□□□□□ -0.83
NPC1-207ENST00000588867 C2orf88Q9BSF0 95 aa9.87□□□□□ -0.83
NPC1-207ENST00000588867 UPK3BQ9BT76 320 aa9.87□□□□□ -0.83
NPC1-207ENST00000588867 Q9H8V8 135 aa9.87□□□□□ -0.83
NPC1-207ENST00000588867 KLK12Q9UKR0 248 aa9.87□□□□□ -0.83
NPC1-207ENST00000588867 C3orf84H3BNL1 204 aa9.86□□□□□ -0.83
NPC1-207ENST00000588867 CHTOPQ9Y3Y2 248 aaKnown RBP9.86□□□□□ -0.83
NPC1-207ENST00000588867 TRAV13-1A0A0B4J241 112 aa9.85□□□□□ -0.83
NPC1-207ENST00000588867 TRAV12-1A0A0B4J245 112 aa9.85□□□□□ -0.83
NPC1-207ENST00000588867 LINC01556Q5JQF7 62 aa9.85□□□□□ -0.83
NPC1-207ENST00000588867 TENM2Q9NT68 2774 aa9.85□□□□□ -0.83
NPC1-207ENST00000588867 DNAH10OSP0CZ25 163 aa9.85□□□□□ -0.83
NPC1-207ENST00000588867 ODF1Q14990 250 aa9.85□□□□□ -0.83
NPC1-207ENST00000588867 C20orf202A1L168 122 aa9.84□□□□□ -0.83
NPC1-207ENST00000588867 MRPL35Q9NZE8 188 aaKnown RBP9.84□□□□□ -0.83
NPC1-207ENST00000588867 REG3AQ06141 175 aa9.83□□□□□ -0.84
NPC1-207ENST00000588867 LINC01545Q5VT33 79 aa9.83□□□□□ -0.84
NPC1-207ENST00000588867 LGALS9CQ6DKI2 356 aa9.83□□□□□ -0.84
NPC1-207ENST00000588867 JOSD1Q15040 202 aaPredicted RBP9.83□□□□□ -0.84
NPC1-207ENST00000588867 STARD9Q9P2P6 4700 aa9.83□□□□□ -0.84
NPC1-207ENST00000588867 A0A0J9YXV3 536 aa9.82□□□□□ -0.84
NPC1-207ENST00000588867 F8VRH5 84 aa9.82□□□□□ -0.84
NPC1-207ENST00000588867 UBE2WQ96B02 151 aa9.82□□□□□ -0.84
NPC1-207ENST00000588867 DYNC2H1Q8NCM8 4307 aaKnown RBP9.82□□□□□ -0.84
NPC1-207ENST00000588867 CRPP02741 224 aa9.82□□□□□ -0.84
NPC1-207ENST00000588867 UBE2D1P51668 147 aa9.82□□□□□ -0.84
NPC1-207ENST00000588867 PYY3Q5JQD4 70 aa9.82□□□□□ -0.84
NPC1-207ENST00000588867 ATOH7Q8N100 152 aa9.82□□□□□ -0.84
NPC1-207ENST00000588867 LINC00959A0A1B0GUT2 108 aa9.81□□□□□ -0.84
NPC1-207ENST00000588867 IGLV4-69A0A075B6H9 119 aa9.8□□□□□ -0.84
NPC1-207ENST00000588867 TRAV9-2A0A087WT02 112 aa9.8□□□□□ -0.84
NPC1-207ENST00000588867 DPM2O94777 84 aa9.8□□□□□ -0.84
NPC1-207ENST00000588867 SS18Q15532 418 aa9.8□□□□□ -0.84
NPC1-207ENST00000588867 ENHOQ6UWT2 76 aa9.8□□□□□ -0.84
NPC1-207ENST00000588867 IGLV10-54A0A075B6I4 117 aa9.8□□□□□ -0.84
NPC1-207ENST00000588867 IGKCP01834 107 aa9.8□□□□□ -0.84
NPC1-207ENST00000588867 PRR34Q9NV39 138 aa9.8□□□□□ -0.84
NPC1-207ENST00000588867 LINC00242Q5T6M2 205 aa9.79□□□□□ -0.84
NPC1-207ENST00000588867 CHAC1Q9BUX1 264 aa9.79□□□□□ -0.84
NPC1-207ENST00000588867 GEMIN7Q9H840 131 aaKnown RBP9.79□□□□□ -0.84
NPC1-207ENST00000588867 C11orf86A6NJI1 115 aa9.78□□□□□ -0.84
NPC1-207ENST00000588867 PLNP26678 52 aa9.78□□□□□ -0.84
NPC1-207ENST00000588867 CCL25O15444 150 aa9.78□□□□□ -0.84
NPC1-207ENST00000588867 LY6G6CO95867 125 aa9.78□□□□□ -0.84
NPC1-207ENST00000588867 IGLC3P0DOY3 106 aa9.78□□□□□ -0.84
NPC1-207ENST00000588867 XCL1P47992 114 aa9.78□□□□□ -0.84
NPC1-207ENST00000588867 COX6A2Q02221 97 aa9.78□□□□□ -0.84
NPC1-207ENST00000588867 C10orf126Q8N4M7 172 aa9.78□□□□□ -0.84
NPC1-207ENST00000588867 PLECQ15149 4684 aaKnown RBP9.78□□□□□ -0.84
NPC1-207ENST00000588867 TINCRA0A1B0GVN0 87 aa9.77□□□□□ -0.85
NPC1-207ENST00000588867 SEC11AP67812 179 aa9.77□□□□□ -0.85
NPC1-207ENST00000588867 TMEM170BQ5T4T1 132 aa9.77□□□□□ -0.85
NPC1-207ENST00000588867 Q9HAA7 133 aa9.77□□□□□ -0.85
NPC1-207ENST00000588867 IBA57-AS1B1ANH7 110 aa9.77□□□□□ -0.85
NPC1-207ENST00000588867 MIAQ16674 131 aa9.77□□□□□ -0.85
NPC1-207ENST00000588867 NFE4Q86UQ8 179 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms