RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 PLEKHB2Q96CS7 222 aa3.07□□□□□ -1.92
LIG3-211ENST00000588713 TMEM141Q96I45 108 aa3.07□□□□□ -1.92
LIG3-211ENST00000588713 TIMM17AQ99595 171 aa3.07□□□□□ -1.92
LIG3-211ENST00000588713 TMEM126AQ9H061 195 aa3.07□□□□□ -1.92
LIG3-211ENST00000588713 DPH3P1Q9H4G8 78 aa3.07□□□□□ -1.92
LIG3-211ENST00000588713 MSRB1Q9NZV6 116 aa3.07□□□□□ -1.92
LIG3-211ENST00000588713 GAGE2DQ9UEU5 116 aa3.07□□□□□ -1.92
LIG3-211ENST00000588713 PRO1854Q9UHT4 67 aa3.07□□□□□ -1.92
LIG3-211ENST00000588713 TRAV8-2A0A0B4J237 113 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 TRAV8-4A0A0B4J246 113 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 TRBV7-7A0A0K0K1E9 115 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 TRBV10-2A0A0K0K1G8 114 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 SDHAF1A6NFY7 115 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 OOSP1A8MZH6 123 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 B5MCH6 92 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 NPFFO15130 113 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 CNIH1O95406 144 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 IGHV3-33P01772 117 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 CFC1BP0CG36 223 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 CFC1P0CG37 223 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 IGHV4-30-4P0DP06 118 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 ARL3P36405 182 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 DLX1P56177 255 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 PMVKQ15126 192 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 LINC01620Q4KN68 170 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 CEMP1Q6PRD7 247 aaPredicted RBP3.06□□□□□ -1.92
LIG3-211ENST00000588713 C10orf99Q6UWK7 81 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 Q8N2B8 174 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 SLC25A29Q8N8R3 303 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 KIR2DL4Q99706 377 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 SIRPDQ9H106 197 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 SPANXCQ9NY87 97 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 ONECUT1Q9UBC0 465 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 KLK5Q9Y337 293 aaPredicted RBP3.06□□□□□ -1.92
LIG3-211ENST00000588713 TNFRSF18Q9Y5U5 241 aa3.06□□□□□ -1.92
LIG3-211ENST00000588713 FLG2Q5D862 2391 aaPredicted RBP3.05□□□□□ -1.92
LIG3-211ENST00000588713 DNAH6Q9C0G6 4158 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 TRAV26-2A0A0B4J265 109 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 TRAV21A0A0B4J279 112 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 ODF3BA8MYP8 253 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 C9JAW5 83 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 H3BVH4 76 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 M0R1W7 72 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 LEPROTO15243 131 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 RTL8CO15255 209 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 ATP5G1P05496 136 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 LGALS3P17931 250 aaKnown RBP3.05□□□□□ -1.92
LIG3-211ENST00000588713 COX7A1P24310 79 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 SAA4P35542 130 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 RPL11P62913 178 aaKnown RBP3.05□□□□□ -1.92
LIG3-211ENST00000588713 HES1Q14469 280 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 RHOHQ15669 191 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 TTC32Q5I0X7 151 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 TMEM170BQ5T4T1 132 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 ZFP2Q6ZN57 461 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 TMEM219Q86XT9 240 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 APRG1Q8IVJ8 170 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 Q8N6K4 173 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 KLHL30-AS1Q8NEE0 82 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 TMEM263Q8WUH6 116 aaKnown RBP3.05□□□□□ -1.92
LIG3-211ENST00000588713 PTH2Q96A98 100 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 AMELXQ99217 191 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 IMUPQ9GZP8 106 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 C11orf21Q9P2W6 132 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 AGRNO00468 2067 aa3.05□□□□□ -1.92
LIG3-211ENST00000588713 TRAV4A0A0B4J268 109 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 TRBV6-5A0A0K0K1A5 114 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 TRBV30A0A0K0K1B3 111 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 IGIPA6NJ69 53 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 PRAC2D3DTV9 90 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 CCDC179H3BU77 68 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 J3QQQ9 107 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 M0R2P5 195 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 LGALS9O00182 355 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 BUB3O43684 328 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 IGF1P05019 195 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 ACYP1P07311 99 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 CRYGDP07320 174 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 CTSGP08311 255 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 SLURP1P55000 103 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 TSPEAR-AS2P59090 65 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 BLCAPP62952 87 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 HERV-K104P63124 156 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 NDPQ00604 133 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 ZNF876PQ49A33 203 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 C15orf53Q8NAA6 179 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 LY6G5BQ8NDX9 201 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 NTN5Q8WTR8 489 aaPredicted RBP3.04□□□□□ -1.92
LIG3-211ENST00000588713 TMEM101Q96IK0 257 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 ODF3Q96PU9 254 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 AGPAT4-IT1Q9H0P7 198 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 DPM3Q9P2X0 92 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 TP53TG1Q9Y2A0 90 aa3.04□□□□□ -1.92
LIG3-211ENST00000588713 FAT1Q14517 4588 aa3.03□□□□□ -1.92
LIG3-211ENST00000588713 IGHV4OR15-8A0A075B7B6 117 aa3.03□□□□□ -1.92
LIG3-211ENST00000588713 A0A087WW49 117 aa3.03□□□□□ -1.92
LIG3-211ENST00000588713 TRAV2A0A0B4J234 112 aa3.03□□□□□ -1.92
LIG3-211ENST00000588713 TMEM223A0PJW6 202 aa3.03□□□□□ -1.92
LIG3-211ENST00000588713 A4D1N5 150 aa3.03□□□□□ -1.92
LIG3-211ENST00000588713 M0R2N4 97 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms