RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 F8VRH5 84 aa17.96■□□□□ 0.47
SCAMP4-210ENST00000588555 S100A12P80511 92 aa17.96■□□□□ 0.47
SCAMP4-210ENST00000588555 MAJINQ3KP22 176 aa17.96■□□□□ 0.47
SCAMP4-210ENST00000588555 CHTOPQ9Y3Y2 248 aaKnown RBP17.96■□□□□ 0.47
SCAMP4-210ENST00000588555 GAGE6Q13070 117 aa17.96■□□□□ 0.47
SCAMP4-210ENST00000588555 VCX2Q9H322 139 aa17.96■□□□□ 0.47
SCAMP4-210ENST00000588555 VAMP8Q9BV40 100 aa17.95■□□□□ 0.46
SCAMP4-210ENST00000588555 SMAGPQ0VAQ4 97 aa17.94■□□□□ 0.46
SCAMP4-210ENST00000588555 RNASE13Q5GAN3 156 aaKnown RBP17.94■□□□□ 0.46
SCAMP4-210ENST00000588555 DGAT2L7PQ6IED9 249 aa17.94■□□□□ 0.46
SCAMP4-210ENST00000588555 TRAV9-2A0A087WT02 112 aa17.94■□□□□ 0.46
SCAMP4-210ENST00000588555 DPM2O94777 84 aa17.94■□□□□ 0.46
SCAMP4-210ENST00000588555 IGLV4-69A0A075B6H9 119 aa17.93■□□□□ 0.46
SCAMP4-210ENST00000588555 ZNF25P17030 456 aaPredicted RBP17.93■□□□□ 0.46
SCAMP4-210ENST00000588555 TIRAPP58753 221 aa17.93■□□□□ 0.46
SCAMP4-210ENST00000588555 AMMECR1LQ6DCA0 310 aa17.93■□□□□ 0.46
SCAMP4-210ENST00000588555 LYPD5Q6UWN5 251 aa17.93■□□□□ 0.46
SCAMP4-210ENST00000588555 ZNF664Q8N3J9 261 aa17.93■□□□□ 0.46
SCAMP4-210ENST00000588555 IGKCP01834 107 aa17.92■□□□□ 0.46
SCAMP4-210ENST00000588555 LELP1Q5T871 98 aa17.92■□□□□ 0.46
SCAMP4-210ENST00000588555 CDC42SE2Q9NRR3 84 aa17.92■□□□□ 0.46
SCAMP4-210ENST00000588555 PAM16Q9Y3D7 125 aa17.92■□□□□ 0.46
SCAMP4-210ENST00000588555 OR5A1Q8NGJ0 315 aa17.91■□□□□ 0.46
SCAMP4-210ENST00000588555 hDV102S1A0JD36 115 aa17.91■□□□□ 0.46
SCAMP4-210ENST00000588555 PLNP26678 52 aa17.91■□□□□ 0.46
SCAMP4-210ENST00000588555 TMEM101Q96IK0 257 aa17.89■□□□□ 0.45
SCAMP4-210ENST00000588555 IGLV4-60A0A075B6I1 120 aa17.89■□□□□ 0.45
SCAMP4-210ENST00000588555 A0A1B0GUV1 79 aa17.87■□□□□ 0.45
SCAMP4-210ENST00000588555 SPATA45Q537H7 98 aa17.87■□□□□ 0.45
SCAMP4-210ENST00000588555 MPV17L2Q567V2 206 aa17.87■□□□□ 0.45
SCAMP4-210ENST00000588555 C15orf53Q8NAA6 179 aa17.87■□□□□ 0.45
SCAMP4-210ENST00000588555 DYNC2H1Q8NCM8 4307 aaKnown RBP17.86■□□□□ 0.45
SCAMP4-210ENST00000588555 C11orf86A6NJI1 115 aa17.86■□□□□ 0.45
SCAMP4-210ENST00000588555 RBX1P62877 108 aa17.86■□□□□ 0.45
SCAMP4-210ENST00000588555 NFE4Q86UQ8 179 aa17.86■□□□□ 0.45
SCAMP4-210ENST00000588555 STPG4Q8N801 248 aa17.86■□□□□ 0.45
SCAMP4-210ENST00000588555 TMEM262E9PQX1 116 aa17.85■□□□□ 0.45
SCAMP4-210ENST00000588555 IGLC3P0DOY3 106 aa17.85■□□□□ 0.45
SCAMP4-210ENST00000588555 ESRGQ1W209 222 aa17.85■□□□□ 0.45
SCAMP4-210ENST00000588555 C2orf88Q9BSF0 95 aa17.85■□□□□ 0.45
SCAMP4-210ENST00000588555 A0A0J9YXV3 536 aa17.84■□□□□ 0.45
SCAMP4-210ENST00000588555 UBE2D1P51668 147 aa17.84■□□□□ 0.45
SCAMP4-210ENST00000588555 HSBP1L1C9JCN9 74 aa17.83■□□□□ 0.44
SCAMP4-210ENST00000588555 PRO1933Q9H354 126 aa17.83■□□□□ 0.44
SCAMP4-210ENST00000588555 ANKRD39Q53RE8 183 aa17.82■□□□□ 0.44
SCAMP4-210ENST00000588555 Q8N3U1 123 aa17.82■□□□□ 0.44
SCAMP4-210ENST00000588555 CHAC1Q9BUX1 264 aa17.82■□□□□ 0.44
SCAMP4-210ENST00000588555 DNAH7Q8WXX0 4024 aa17.82■□□□□ 0.44
SCAMP4-210ENST00000588555 CSMD3Q7Z407 3707 aa17.82■□□□□ 0.44
SCAMP4-210ENST00000588555 IGLL5B9A064 214 aa17.81■□□□□ 0.44
SCAMP4-210ENST00000588555 PKIAP61925 76 aa17.8■□□□□ 0.44
SCAMP4-210ENST00000588555 FAM19A3Q7Z5A8 133 aa17.79■□□□□ 0.44
SCAMP4-210ENST00000588555 TRAV8-6A0A0B4J262 113 aa17.79■□□□□ 0.44
SCAMP4-210ENST00000588555 TINCRA0A1B0GVN0 87 aa17.79■□□□□ 0.44
SCAMP4-210ENST00000588555 TRAV13-1A0A0B4J241 112 aa17.77■□□□□ 0.44
SCAMP4-210ENST00000588555 ZNF22P17026 224 aaPredicted RBP17.77■□□□□ 0.44
SCAMP4-210ENST00000588555 WFDC10BQ8IUB3 73 aa17.77■□□□□ 0.44
SCAMP4-210ENST00000588555 LINC00242Q5T6M2 205 aa17.76■□□□□ 0.43
SCAMP4-210ENST00000588555 TSTD3H0UI37 97 aa17.76■□□□□ 0.43
SCAMP4-210ENST00000588555 TCTAP57738 103 aa17.76■□□□□ 0.43
SCAMP4-210ENST00000588555 TMEM170BQ5T4T1 132 aa17.74■□□□□ 0.43
SCAMP4-210ENST00000588555 IGKV2D-26A0A0A0MRZ7 120 aa17.74■□□□□ 0.43
SCAMP4-210ENST00000588555 IGLV5-45A0A087WSX0 123 aa17.73■□□□□ 0.43
SCAMP4-210ENST00000588555 COX6A2Q02221 97 aa17.73■□□□□ 0.43
SCAMP4-210ENST00000588555 C14orf144Q96I85 54 aa17.73■□□□□ 0.43
SCAMP4-210ENST00000588555 IGKV3OR2-268A0A0C4DH90 116 aa17.71■□□□□ 0.43
SCAMP4-210ENST00000588555 ANGP03950 147 aaKnown RBP17.71■□□□□ 0.43
SCAMP4-210ENST00000588555 LINC00269Q8N2A0 174 aa17.71■□□□□ 0.43
SCAMP4-210ENST00000588555 LINC00588Q9Y4M8 146 aa17.71■□□□□ 0.43
SCAMP4-210ENST00000588555 PCP4L1A6NKN8 68 aa17.71■□□□□ 0.43
SCAMP4-210ENST00000588555 HERVK_113P63121 156 aa17.71■□□□□ 0.43
SCAMP4-210ENST00000588555 SEC11AP67812 179 aa17.71■□□□□ 0.43
SCAMP4-210ENST00000588555 GEMIN7Q9H840 131 aaKnown RBP17.71■□□□□ 0.43
SCAMP4-210ENST00000588555 TGP01266 2768 aa17.7■□□□□ 0.42
SCAMP4-210ENST00000588555 LINC00959A0A1B0GUT2 108 aa17.7■□□□□ 0.42
SCAMP4-210ENST00000588555 TMEM223A0PJW6 202 aa17.7■□□□□ 0.42
SCAMP4-210ENST00000588555 E9PLD3 99 aa17.69■□□□□ 0.42
SCAMP4-210ENST00000588555 CLPSL2Q6UWE3 100 aa17.69■□□□□ 0.42
SCAMP4-210ENST00000588555 CDKN2A-AS1Q9UH64 79 aa17.69■□□□□ 0.42
SCAMP4-210ENST00000588555 APLNQ9ULZ1 77 aa17.69■□□□□ 0.42
SCAMP4-210ENST00000588555 MRPS16Q9Y3D3 137 aaKnown RBP17.69■□□□□ 0.42
SCAMP4-210ENST00000588555 NMUP48645 174 aa17.68■□□□□ 0.42
SCAMP4-210ENST00000588555 LINC00469Q8N7U9 141 aa17.68■□□□□ 0.42
SCAMP4-210ENST00000588555 PLECQ15149 4684 aaKnown RBP17.68■□□□□ 0.42
SCAMP4-210ENST00000588555 NUPR2A6NF83 97 aa17.68■□□□□ 0.42
SCAMP4-210ENST00000588555 COX8AP10176 69 aa17.68■□□□□ 0.42
SCAMP4-210ENST00000588555 IGHV3-30P01768 117 aa17.67■□□□□ 0.42
SCAMP4-210ENST00000588555 IGHV3-33P01772 117 aa17.67■□□□□ 0.42
SCAMP4-210ENST00000588555 IGHV3-30-3P0DP02 117 aa17.67■□□□□ 0.42
SCAMP4-210ENST00000588555 IGHV3-30-5P0DP03 117 aa17.67■□□□□ 0.42
SCAMP4-210ENST00000588555 CCL18P55774 89 aa17.67■□□□□ 0.42
SCAMP4-210ENST00000588555 REG3AQ06141 175 aa17.67■□□□□ 0.42
SCAMP4-210ENST00000588555 MIEN1Q9BRT3 115 aa17.67■□□□□ 0.42
SCAMP4-210ENST00000588555 TP73-AS1Q9UF72 201 aa17.67■□□□□ 0.42
SCAMP4-210ENST00000588555 HERVK_113P61574 105 aa17.66■□□□□ 0.42
SCAMP4-210ENST00000588555 PCP2Q8IVA1 136 aa17.66■□□□□ 0.42
SCAMP4-210ENST00000588555 PRR34Q9NV39 138 aa17.66■□□□□ 0.42
SCAMP4-210ENST00000588555 TENM2Q9NT68 2774 aa17.66■□□□□ 0.42
SCAMP4-210ENST00000588555 LINC01556Q5JQF7 62 aa17.66■□□□□ 0.42
SCAMP4-210ENST00000588555 UQCR10Q9UDW1 63 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms