RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	GAGE12H	A6NDE8	117 aa		10.22	□□□□□ -0.77
NEDD4L-223	ENST00000588516	RBMY1A1	P0DJD3	496 aa	Known RBP	10.22	□□□□□ -0.77
NEDD4L-223	ENST00000588516	RBMY1C	P0DJD4	496 aa		10.22	□□□□□ -0.77
NEDD4L-223	ENST00000588516	IFITM1	P13164	125 aa		10.22	□□□□□ -0.77
NEDD4L-223	ENST00000588516	TIRAP	P58753	221 aa		10.22	□□□□□ -0.77
NEDD4L-223	ENST00000588516	RBMY1F	Q15415	496 aa	Known RBP	10.22	□□□□□ -0.77
NEDD4L-223	ENST00000588516	SPATA25	Q9BR10	227 aa		10.22	□□□□□ -0.77
NEDD4L-223	ENST00000588516		A0A0J9YXY3	114 aa		10.21	□□□□□ -0.78
NEDD4L-223	ENST00000588516	IGHV3-30-3	P0DP02	117 aa		10.21	□□□□□ -0.78
NEDD4L-223	ENST00000588516	CIRBP	Q14011	172 aa	Known RBP	10.21	□□□□□ -0.78
NEDD4L-223	ENST00000588516	DGAT2L7P	Q6IED9	249 aa		10.21	□□□□□ -0.78
NEDD4L-223	ENST00000588516	C11orf72	Q8NBR9	251 aa		10.21	□□□□□ -0.78
NEDD4L-223	ENST00000588516	PPDPFL	Q8WWR9	84 aa		10.21	□□□□□ -0.78
NEDD4L-223	ENST00000588516	SPANXD	Q9BXN6	97 aa		10.21	□□□□□ -0.78
NEDD4L-223	ENST00000588516	SPANXC	Q9NY87	97 aa		10.21	□□□□□ -0.78
NEDD4L-223	ENST00000588516		A4D1N5	150 aa		10.2	□□□□□ -0.78
NEDD4L-223	ENST00000588516	RBMY1B	A6NDE4	496 aa	Known RBP	10.2	□□□□□ -0.78
NEDD4L-223	ENST00000588516	RBMY1E	A6NEQ0	496 aa	Known RBP	10.2	□□□□□ -0.78
NEDD4L-223	ENST00000588516	RBMY1D	P0C7P1	496 aa	Known RBP	10.2	□□□□□ -0.78
NEDD4L-223	ENST00000588516	DEFB136	Q30KP8	78 aa		10.2	□□□□□ -0.78
NEDD4L-223	ENST00000588516	SBSPON	Q8IVN8	264 aa		10.2	□□□□□ -0.78
NEDD4L-223	ENST00000588516	OPRPN	Q99935	248 aa	Predicted RBP	10.2	□□□□□ -0.78
NEDD4L-223	ENST00000588516	UBE2D4	Q9Y2X8	147 aa		10.2	□□□□□ -0.78
NEDD4L-223	ENST00000588516	COX6C	P09669	75 aa		10.19	□□□□□ -0.78
NEDD4L-223	ENST00000588516	FOXI1	Q12951	378 aa		10.19	□□□□□ -0.78
NEDD4L-223	ENST00000588516	TEN1	Q86WV5	123 aa		10.19	□□□□□ -0.78
NEDD4L-223	ENST00000588516	VSIG2	Q96IQ7	327 aa		10.19	□□□□□ -0.78
NEDD4L-223	ENST00000588516	CHCHD7	Q9BUK0	85 aa		10.19	□□□□□ -0.78
NEDD4L-223	ENST00000588516	IGHV3-73	A0A0B4J1V6	119 aa		10.18	□□□□□ -0.78
NEDD4L-223	ENST00000588516	TMEM262	E9PQX1	116 aa		10.18	□□□□□ -0.78
NEDD4L-223	ENST00000588516	IGHV3-33	P01772	117 aa		10.18	□□□□□ -0.78
NEDD4L-223	ENST00000588516	HERVK_113	P63121	156 aa		10.18	□□□□□ -0.78
NEDD4L-223	ENST00000588516	RPL36A	P83881	106 aa	Known RBP	10.18	□□□□□ -0.78
NEDD4L-223	ENST00000588516	DAZ2	Q13117	558 aa	Known RBP	10.18	□□□□□ -0.78
NEDD4L-223	ENST00000588516	ATXN8	Q156A1	80 aa		10.18	□□□□□ -0.78
NEDD4L-223	ENST00000588516	DAZ4	Q86SG3	579 aa	Known RBP	10.18	□□□□□ -0.78
NEDD4L-223	ENST00000588516	MUSTN1	Q8IVN3	82 aa		10.18	□□□□□ -0.78
NEDD4L-223	ENST00000588516	TMEM263	Q8WUH6	116 aa	Known RBP	10.18	□□□□□ -0.78
NEDD4L-223	ENST00000588516	RPL36AL	Q969Q0	106 aa	Known RBP	10.18	□□□□□ -0.78
NEDD4L-223	ENST00000588516	FAM110A	Q9BQ89	295 aa		10.18	□□□□□ -0.78
NEDD4L-223	ENST00000588516	DAZ3	Q9NR90	486 aa	Known RBP	10.18	□□□□□ -0.78
NEDD4L-223	ENST00000588516	NDUFA12	Q9UI09	145 aa		10.18	□□□□□ -0.78
NEDD4L-223	ENST00000588516	CSDC2	Q9Y534	153 aa	Known RBP	10.18	□□□□□ -0.78
NEDD4L-223	ENST00000588516	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.18	□□□□□ -0.78
NEDD4L-223	ENST00000588516	FHL3	Q13643	280 aa		10.17	□□□□□ -0.78
NEDD4L-223	ENST00000588516		Q6ZSV7	163 aa		10.17	□□□□□ -0.78
NEDD4L-223	ENST00000588516	SH2D6	Q7Z4S9	175 aa		10.17	□□□□□ -0.78
NEDD4L-223	ENST00000588516	ZNF418	Q8TF45	676 aa	Predicted RBP	10.17	□□□□□ -0.78
NEDD4L-223	ENST00000588516	TRBV30	A0A0K0K1B3	111 aa		10.16	□□□□□ -0.78
NEDD4L-223	ENST00000588516	AZU1	P20160	251 aa		10.16	□□□□□ -0.78
NEDD4L-223	ENST00000588516	MIA	Q16674	131 aa		10.16	□□□□□ -0.78
NEDD4L-223	ENST00000588516		Q1RN00	199 aa		10.16	□□□□□ -0.78
NEDD4L-223	ENST00000588516	ZFAND6	Q6FIF0	208 aa		10.16	□□□□□ -0.78
NEDD4L-223	ENST00000588516	SHISA2	Q6UWI4	295 aa		10.16	□□□□□ -0.78
NEDD4L-223	ENST00000588516	C18orf65	Q6ZTR6	163 aa		10.16	□□□□□ -0.78
NEDD4L-223	ENST00000588516	FAM19A3	Q7Z5A8	133 aa		10.16	□□□□□ -0.78
NEDD4L-223	ENST00000588516	DEFB104A	Q8WTQ1	72 aa		10.16	□□□□□ -0.78
NEDD4L-223	ENST00000588516	IGLV5-45	A0A087WSX0	123 aa		10.15	□□□□□ -0.78
NEDD4L-223	ENST00000588516	TRAV4	A0A0B4J268	109 aa		10.15	□□□□□ -0.78
NEDD4L-223	ENST00000588516	CCL24	O00175	119 aa		10.15	□□□□□ -0.78
NEDD4L-223	ENST00000588516	TCL1B	O95988	128 aa		10.15	□□□□□ -0.78
NEDD4L-223	ENST00000588516	LINC01600	Q96MT4	127 aa		10.15	□□□□□ -0.78
NEDD4L-223	ENST00000588516		H7C423	109 aa		10.14	□□□□□ -0.79
NEDD4L-223	ENST00000588516	MTURN	Q8N3F0	131 aa		10.14	□□□□□ -0.79
NEDD4L-223	ENST00000588516	IL17D	Q8TAD2	202 aa		10.14	□□□□□ -0.79
NEDD4L-223	ENST00000588516	C16orf95	Q9H693	158 aa		10.14	□□□□□ -0.79
NEDD4L-223	ENST00000588516	TRRAP	Q9Y4A5	3859 aa		10.14	□□□□□ -0.79
NEDD4L-223	ENST00000588516	DNAJC9-AS1	A6NH13	148 aa		10.13	□□□□□ -0.79
NEDD4L-223	ENST00000588516	NDUFA1	O15239	70 aa		10.13	□□□□□ -0.79
NEDD4L-223	ENST00000588516	PRSS2	P07478	247 aa		10.13	□□□□□ -0.79
NEDD4L-223	ENST00000588516	PROK1	P58294	105 aa		10.13	□□□□□ -0.79
NEDD4L-223	ENST00000588516	PPDPF	Q9H3Y8	114 aa		10.13	□□□□□ -0.79
NEDD4L-223	ENST00000588516	IGHV3-64	A0A075B6Q5	118 aa		10.12	□□□□□ -0.79
NEDD4L-223	ENST00000588516	TRGV1	A0A0A0MS02	117 aa		10.12	□□□□□ -0.79
NEDD4L-223	ENST00000588516		K7EQD1	137 aa		10.12	□□□□□ -0.79
NEDD4L-223	ENST00000588516	ODF3L2	Q3SX64	289 aa		10.12	□□□□□ -0.79
NEDD4L-223	ENST00000588516	C16orf74	Q96GX8	76 aa		10.12	□□□□□ -0.79
NEDD4L-223	ENST00000588516	TMEM101	Q96IK0	257 aa		10.12	□□□□□ -0.79
NEDD4L-223	ENST00000588516	GTSF1L	Q9H1H1	148 aa		10.12	□□□□□ -0.79
NEDD4L-223	ENST00000588516	XCL2	Q9UBD3	114 aa		10.12	□□□□□ -0.79
NEDD4L-223	ENST00000588516	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	10.11	□□□□□ -0.79
NEDD4L-223	ENST00000588516	IGKV2-29	A2NJV5	120 aa	Predicted RBP	10.11	□□□□□ -0.79
NEDD4L-223	ENST00000588516	SLC25A20	O43772	301 aa		10.11	□□□□□ -0.79
NEDD4L-223	ENST00000588516	SMCP	P49901	116 aa	Predicted RBP	10.11	□□□□□ -0.79
NEDD4L-223	ENST00000588516		Q6ZSN1	163 aa		10.11	□□□□□ -0.79
NEDD4L-223	ENST00000588516	FAM104A	Q969W3	186 aa		10.11	□□□□□ -0.79
NEDD4L-223	ENST00000588516	HILS1	P60008	231 aa		10.1	□□□□□ -0.79
NEDD4L-223	ENST00000588516	HERV-K104	P63124	156 aa		10.1	□□□□□ -0.79
NEDD4L-223	ENST00000588516		Q6ZUT4	128 aa		10.1	□□□□□ -0.79
NEDD4L-223	ENST00000588516	C1orf158	Q8N1D5	194 aa		10.1	□□□□□ -0.79
NEDD4L-223	ENST00000588516	LITAF	Q99732	161 aa		10.1	□□□□□ -0.79
NEDD4L-223	ENST00000588516	PRKDC	P78527	4128 aa	Known RBP	10.1	□□□□□ -0.79
NEDD4L-223	ENST00000588516	NBEAL2	Q6ZNJ1	2754 aa		10.1	□□□□□ -0.79
NEDD4L-223	ENST00000588516	UBE2L6	O14933	153 aa		10.09	□□□□□ -0.79
NEDD4L-223	ENST00000588516	RNASE1	P07998	156 aa	Known RBP	10.09	□□□□□ -0.79
NEDD4L-223	ENST00000588516	TRAV8-3	A0A0A6YYJ7	113 aa		10.08	□□□□□ -0.8
NEDD4L-223	ENST00000588516	IGLV5-39	A0A0G2JS06	123 aa		10.08	□□□□□ -0.8
NEDD4L-223	ENST00000588516		C9JAW5	83 aa		10.08	□□□□□ -0.8
NEDD4L-223	ENST00000588516	SPINK8	P0C7L1	97 aa		10.08	□□□□□ -0.8
NEDD4L-223	ENST00000588516	LINC01620	Q4KN68	170 aa		10.08	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 82 ms