RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 CLEC2BQ92478 149 aa2.05□□□□□ -2.08
TUBD1-208ENST00000588009 RAB37Q96AX2 223 aa2.05□□□□□ -2.08
TUBD1-208ENST00000588009 CITO14578 2027 aa2.05□□□□□ -2.08
TUBD1-208ENST00000588009 PKHD1P08F94 4074 aa2.05□□□□□ -2.08
TUBD1-208ENST00000588009 MED12Q93074 2177 aa2.05□□□□□ -2.08
TUBD1-208ENST00000588009 TCRBV4S1A1TA0A5B7 111 aa2.04□□□□□ -2.08
TUBD1-208ENST00000588009 HCRTO43612 131 aa2.04□□□□□ -2.08
TUBD1-208ENST00000588009 SLC25A4P12235 298 aa2.04□□□□□ -2.08
TUBD1-208ENST00000588009 TPT1P13693 172 aaKnown RBP2.04□□□□□ -2.08
TUBD1-208ENST00000588009 NCS1P62166 190 aa2.04□□□□□ -2.08
TUBD1-208ENST00000588009 SNRPD3P62318 126 aaKnown RBP2.04□□□□□ -2.08
TUBD1-208ENST00000588009 CDK6Q00534 326 aa2.04□□□□□ -2.08
TUBD1-208ENST00000588009 DEFB121Q5J5C9 76 aa2.04□□□□□ -2.08
TUBD1-208ENST00000588009 HAGHLQ6PII5 290 aaPredicted RBP2.04□□□□□ -2.08
TUBD1-208ENST00000588009 TMEM91Q6ZNR0 172 aa2.04□□□□□ -2.08
TUBD1-208ENST00000588009 EXPH5Q8NEV8 1989 aa2.04□□□□□ -2.08
TUBD1-208ENST00000588009 OR4C12Q96R67 309 aa2.04□□□□□ -2.08
TUBD1-208ENST00000588009 TP53RKQ96S44 253 aa2.04□□□□□ -2.08
TUBD1-208ENST00000588009 CCL19Q99731 98 aa2.04□□□□□ -2.08
TUBD1-208ENST00000588009 NABP2Q9BQ15 211 aa2.04□□□□□ -2.08
TUBD1-208ENST00000588009 GGACTQ9BVM4 153 aa2.04□□□□□ -2.08
TUBD1-208ENST00000588009 TPRKBQ9Y3C4 175 aa2.04□□□□□ -2.08
TUBD1-208ENST00000588009 DNAJC15Q9Y5T4 150 aa2.04□□□□□ -2.08
TUBD1-208ENST00000588009 PLIN4Q96Q06 1357 aa2.03□□□□□ -2.08
TUBD1-208ENST00000588009 IGKV3D-7A0A0C4DH55 119 aa2.03□□□□□ -2.08
TUBD1-208ENST00000588009 IGKV3OR2-268A0A0C4DH90 116 aa2.03□□□□□ -2.08
TUBD1-208ENST00000588009 FAM236AA0A1B0GUQ0 79 aa2.03□□□□□ -2.08
TUBD1-208ENST00000588009 FAM236BA0A1B0GV22 79 aa2.03□□□□□ -2.08
TUBD1-208ENST00000588009 LYRM1O43325 122 aa2.03□□□□□ -2.08
TUBD1-208ENST00000588009 HLA-DRB4P13762 266 aa2.03□□□□□ -2.08
TUBD1-208ENST00000588009 RRAS2P62070 204 aaPredicted RBP2.03□□□□□ -2.08
TUBD1-208ENST00000588009 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
TUBD1-208ENST00000588009 KRTAP26-1Q6PEX3 210 aa2.03□□□□□ -2.08
TUBD1-208ENST00000588009 TEN1Q86WV5 123 aa2.03□□□□□ -2.08
TUBD1-208ENST00000588009 Q8TAT8 98 aa2.03□□□□□ -2.08
TUBD1-208ENST00000588009 MUCL1Q96DR8 90 aa2.03□□□□□ -2.08
TUBD1-208ENST00000588009 KLK9Q9UKQ9 250 aa2.03□□□□□ -2.08
TUBD1-208ENST00000588009 HLA-DRB4X5D2U9 266 aa2.03□□□□□ -2.08
TUBD1-208ENST00000588009 HSPG2P98160 4391 aa2.03□□□□□ -2.08
TUBD1-208ENST00000588009 FREM3P0C091 2139 aa2.03□□□□□ -2.08
TUBD1-208ENST00000588009 MYH9P35579 1960 aaKnown RBP2.03□□□□□ -2.08
TUBD1-208ENST00000588009 MYH7P12883 1935 aa2.02□□□□□ -2.09
TUBD1-208ENST00000588009 TRAV27A0A087WT01 109 aa2.02□□□□□ -2.09
TUBD1-208ENST00000588009 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.02□□□□□ -2.09
TUBD1-208ENST00000588009 CD14P08571 375 aa2.02□□□□□ -2.09
TUBD1-208ENST00000588009 SAA1P0DJI8 122 aaPredicted RBP2.02□□□□□ -2.09
TUBD1-208ENST00000588009 BLCAPP62952 87 aa2.02□□□□□ -2.09
TUBD1-208ENST00000588009 ARPINQ7Z6K5 226 aa2.02□□□□□ -2.09
TUBD1-208ENST00000588009 CTAGE3PQ8IX95 158 aa2.02□□□□□ -2.09
TUBD1-208ENST00000588009 LINC00269Q8N2A0 174 aa2.02□□□□□ -2.09
TUBD1-208ENST00000588009 FAM19A2Q8N3H0 131 aa2.02□□□□□ -2.09
TUBD1-208ENST00000588009 C4orf3Q8WVX3 66 aa2.02□□□□□ -2.09
TUBD1-208ENST00000588009 MAGOHBQ96A72 148 aaKnown RBP2.02□□□□□ -2.09
TUBD1-208ENST00000588009 COMMD3Q9UBI1 195 aa2.02□□□□□ -2.09
TUBD1-208ENST00000588009 TRAV10A0A0B4J240 114 aa2.01□□□□□ -2.09
TUBD1-208ENST00000588009 C9orf170A2RU37 121 aa2.01□□□□□ -2.09
TUBD1-208ENST00000588009 ZNF736B4DX44 427 aaPredicted RBP2.01□□□□□ -2.09
TUBD1-208ENST00000588009 K7ERU9 68 aa2.01□□□□□ -2.09
TUBD1-208ENST00000588009 NPFFO15130 113 aa2.01□□□□□ -2.09
TUBD1-208ENST00000588009 DLEU1O43261 78 aa2.01□□□□□ -2.09
TUBD1-208ENST00000588009 GNG7O60262 68 aa2.01□□□□□ -2.09
TUBD1-208ENST00000588009 CD3DP04234 171 aa2.01□□□□□ -2.09
TUBD1-208ENST00000588009 CNBPP62633 177 aaKnown RBP2.01□□□□□ -2.09
TUBD1-208ENST00000588009 TEX261Q6UWH6 196 aa2.01□□□□□ -2.09
TUBD1-208ENST00000588009 C2orf82Q6UX34 121 aa2.01□□□□□ -2.09
TUBD1-208ENST00000588009 LINC00470Q9BZP3 86 aa2.01□□□□□ -2.09
TUBD1-208ENST00000588009 IGKV2-29A2NJV5 120 aaPredicted RBP2□□□□□ -2.09
TUBD1-208ENST00000588009 A6NN06 94 aa2□□□□□ -2.09
TUBD1-208ENST00000588009 J3QR89 54 aa2□□□□□ -2.09
TUBD1-208ENST00000588009 SMIM24O75264 130 aa2□□□□□ -2.09
TUBD1-208ENST00000588009 NCR2O95944 276 aa2□□□□□ -2.09
TUBD1-208ENST00000588009 ASIPP42127 132 aa2□□□□□ -2.09
TUBD1-208ENST00000588009 ZNF833PQ6ZTB9 187 aa2□□□□□ -2.09
TUBD1-208ENST00000588009 MMGT1Q8N4V1 131 aa2□□□□□ -2.09
TUBD1-208ENST00000588009 C1orf54Q8WWF1 131 aa2□□□□□ -2.09
TUBD1-208ENST00000588009 C2orf88Q9BSF0 95 aa2□□□□□ -2.09
TUBD1-208ENST00000588009 SNURFQ9Y675 71 aa2□□□□□ -2.09
TUBD1-208ENST00000588009 MYCBP2O75592 4640 aa2□□□□□ -2.09
TUBD1-208ENST00000588009 IGKV2-40A0A087WW87 121 aaPredicted RBP1.99□□□□□ -2.09
TUBD1-208ENST00000588009 LOC107986453A0A1B0GWG9 222 aa1.99□□□□□ -2.09
TUBD1-208ENST00000588009 ZNF670-ZNF695F2Z2N8 137 aa1.99□□□□□ -2.09
TUBD1-208ENST00000588009 K7EIL1 84 aa1.99□□□□□ -2.09
TUBD1-208ENST00000588009 ERC2-IT1O76042 136 aa1.99□□□□□ -2.09
TUBD1-208ENST00000588009 IGKV2D-40P01614 121 aaPredicted RBP1.99□□□□□ -2.09
TUBD1-208ENST00000588009 TRACP01848 142 aa1.99□□□□□ -2.09
TUBD1-208ENST00000588009 CD2P06729 351 aa1.99□□□□□ -2.09
TUBD1-208ENST00000588009 COPZ1P61923 177 aa1.99□□□□□ -2.09
TUBD1-208ENST00000588009 SELENOWP63302 87 aa1.99□□□□□ -2.09
TUBD1-208ENST00000588009 NEDD8Q15843 81 aa1.99□□□□□ -2.09
TUBD1-208ENST00000588009 LELP1Q5T871 98 aa1.99□□□□□ -2.09
TUBD1-208ENST00000588009 OR10AC1Q8NH08 325 aa1.99□□□□□ -2.09
TUBD1-208ENST00000588009 CGREF1Q99674 301 aa1.99□□□□□ -2.09
TUBD1-208ENST00000588009 METTL1Q9UBP6 276 aaKnown RBP1.99□□□□□ -2.09
TUBD1-208ENST00000588009 LSM2Q9Y333 95 aaKnown RBP1.99□□□□□ -2.09
TUBD1-208ENST00000588009 HEATR1Q9H583 2144 aaKnown RBP1.99□□□□□ -2.09
TUBD1-208ENST00000588009 DNAH9Q9NYC9 4486 aa1.99□□□□□ -2.09
TUBD1-208ENST00000588009 IGKV3-7A0A075B6H7 116 aa1.98□□□□□ -2.09
TUBD1-208ENST00000588009 M0R129 80 aa1.98□□□□□ -2.09
TUBD1-208ENST00000588009 HIST1H1BP16401 226 aaKnown RBP1.98□□□□□ -2.09
TUBD1-208ENST00000588009 OTOSQ8NHW6 89 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms