RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 LINC00643Q86TS7 51 aa9.39□□□□□ -0.91
ITGB4-212ENST00000584558 LITAFQ99732 161 aa9.39□□□□□ -0.91
ITGB4-212ENST00000584558 TIMM21Q9BVV7 248 aa9.39□□□□□ -0.91
ITGB4-212ENST00000584558 IGHV4OR15-8A0A075B7B6 117 aa9.39□□□□□ -0.91
ITGB4-212ENST00000584558 A0A087WW49 117 aa9.39□□□□□ -0.91
ITGB4-212ENST00000584558 A0A1B0GX51 115 aa9.39□□□□□ -0.91
ITGB4-212ENST00000584558 ACYP1P07311 99 aa9.39□□□□□ -0.91
ITGB4-212ENST00000584558 PF4V1P10720 104 aa9.39□□□□□ -0.91
ITGB4-212ENST00000584558 WFDC11Q8NEX6 87 aa9.39□□□□□ -0.91
ITGB4-212ENST00000584558 KIF25-AS1Q9Y6Z4 181 aa9.39□□□□□ -0.91
ITGB4-212ENST00000584558 FN1P02751 2386 aaKnown RBP9.39□□□□□ -0.91
ITGB4-212ENST00000584558 A0A0J9YX75 114 aa9.38□□□□□ -0.91
ITGB4-212ENST00000584558 F6UB75 175 aa9.38□□□□□ -0.91
ITGB4-212ENST00000584558 COX7CP15954 63 aa9.38□□□□□ -0.91
ITGB4-212ENST00000584558 DEFB112Q30KQ8 113 aa9.38□□□□□ -0.91
ITGB4-212ENST00000584558 hADV29S1A0JD25 119 aa9.38□□□□□ -0.91
ITGB4-212ENST00000584558 H3BUA1 57 aa9.38□□□□□ -0.91
ITGB4-212ENST00000584558 CFHR3Q02985 330 aa9.38□□□□□ -0.91
ITGB4-212ENST00000584558 TRAV25A0A0B4J276 109 aa9.38□□□□□ -0.91
ITGB4-212ENST00000584558 DAND5Q8N907 189 aa9.38□□□□□ -0.91
ITGB4-212ENST00000584558 LINC00477Q96M19 166 aa9.38□□□□□ -0.91
ITGB4-212ENST00000584558 LENEPQ9Y5L5 61 aa9.38□□□□□ -0.91
ITGB4-212ENST00000584558 U3KQE9 123 aa9.38□□□□□ -0.91
ITGB4-212ENST00000584558 IGKV3-7A0A075B6H7 116 aa9.37□□□□□ -0.91
ITGB4-212ENST00000584558 TRBV27A0A0K0K1C4 114 aa9.37□□□□□ -0.91
ITGB4-212ENST00000584558 A8MZ25 164 aa9.37□□□□□ -0.91
ITGB4-212ENST00000584558 IGLV1-40P01703 118 aa9.37□□□□□ -0.91
ITGB4-212ENST00000584558 RHOHQ15669 191 aa9.37□□□□□ -0.91
ITGB4-212ENST00000584558 C9orf139Q6ZV77 190 aa9.37□□□□□ -0.91
ITGB4-212ENST00000584558 NDUFA12Q9UI09 145 aa9.37□□□□□ -0.91
ITGB4-212ENST00000584558 IGHV4-59P01825 116 aa9.36□□□□□ -0.91
ITGB4-212ENST00000584558 TMEM61Q8N0U2 210 aa9.36□□□□□ -0.91
ITGB4-212ENST00000584558 NSD1Q96L73 2696 aaPredicted RBP9.36□□□□□ -0.91
ITGB4-212ENST00000584558 MED14OSP0DP75 135 aa9.36□□□□□ -0.91
ITGB4-212ENST00000584558 RPL11P62913 178 aaKnown RBP9.36□□□□□ -0.91
ITGB4-212ENST00000584558 MIAQ16674 131 aa9.36□□□□□ -0.91
ITGB4-212ENST00000584558 CYSTM1Q9H1C7 97 aa9.35□□□□□ -0.91
ITGB4-212ENST00000584558 NACAE9PAV3 2078 aa9.35□□□□□ -0.91
ITGB4-212ENST00000584558 RS1O15537 224 aa9.35□□□□□ -0.91
ITGB4-212ENST00000584558 ATP5G1P05496 136 aa9.35□□□□□ -0.91
ITGB4-212ENST00000584558 RNASE13Q5GAN3 156 aaKnown RBP9.35□□□□□ -0.91
ITGB4-212ENST00000584558 KIR2DL5BQ8NHK3 375 aa9.35□□□□□ -0.91
ITGB4-212ENST00000584558 TRBV12-3P01733 135 aa9.34□□□□□ -0.91
ITGB4-212ENST00000584558 DCANP1Q8TF63 244 aa9.34□□□□□ -0.91
ITGB4-212ENST00000584558 USMG5Q96IX5 58 aa9.34□□□□□ -0.91
ITGB4-212ENST00000584558 ANK3Q12955 4377 aaKnown RBP9.34□□□□□ -0.91
ITGB4-212ENST00000584558 IGLV4-3A0A075B6K6 122 aa9.34□□□□□ -0.91
ITGB4-212ENST00000584558 SPANXDQ9BXN6 97 aa9.34□□□□□ -0.91
ITGB4-212ENST00000584558 SPANXCQ9NY87 97 aa9.34□□□□□ -0.91
ITGB4-212ENST00000584558 HIVEP2P31629 2446 aa9.34□□□□□ -0.91
ITGB4-212ENST00000584558 OVOL1O14753 267 aa9.34□□□□□ -0.92
ITGB4-212ENST00000584558 DAZ2Q13117 558 aaKnown RBP9.34□□□□□ -0.92
ITGB4-212ENST00000584558 DAZ4Q86SG3 579 aaKnown RBP9.34□□□□□ -0.92
ITGB4-212ENST00000584558 C2orf48Q96LS8 159 aa9.34□□□□□ -0.92
ITGB4-212ENST00000584558 Q96MF0 132 aa9.34□□□□□ -0.92
ITGB4-212ENST00000584558 DAZ1Q9NQZ3 744 aaKnown RBP9.34□□□□□ -0.92
ITGB4-212ENST00000584558 DAZ3Q9NR90 486 aaKnown RBP9.34□□□□□ -0.92
ITGB4-212ENST00000584558 TRACP01848 142 aa9.33□□□□□ -0.92
ITGB4-212ENST00000584558 CRYGAP11844 174 aa9.33□□□□□ -0.92
ITGB4-212ENST00000584558 SMR3AQ99954 134 aa9.33□□□□□ -0.92
ITGB4-212ENST00000584558 NSUN5P1Q3KNT7 163 aa9.33□□□□□ -0.92
ITGB4-212ENST00000584558 C20orf203Q8NBC4 194 aa9.33□□□□□ -0.92
ITGB4-212ENST00000584558 NXPH4O95158 308 aa9.32□□□□□ -0.92
ITGB4-212ENST00000584558 CD28P10747 220 aa9.32□□□□□ -0.92
ITGB4-212ENST00000584558 Q6YL49 198 aa9.32□□□□□ -0.92
ITGB4-212ENST00000584558 TRAV13-1A0A0B4J241 112 aa9.32□□□□□ -0.92
ITGB4-212ENST00000584558 WIPF1O43516 503 aa9.32□□□□□ -0.92
ITGB4-212ENST00000584558 NDUFA4O00483 81 aa9.31□□□□□ -0.92
ITGB4-212ENST00000584558 RPS28P62857 69 aaKnown RBP9.31□□□□□ -0.92
ITGB4-212ENST00000584558 UNQ9165/PRO28630Q6UXU0 137 aa9.31□□□□□ -0.92
ITGB4-212ENST00000584558 C5orf38Q86SI9 138 aa9.31□□□□□ -0.92
ITGB4-212ENST00000584558 IGHV1-58A0A0C4DH39 117 aa9.31□□□□□ -0.92
ITGB4-212ENST00000584558 ATOX1O00244 68 aa9.31□□□□□ -0.92
ITGB4-212ENST00000584558 DSCR8Q96T75 97 aa9.31□□□□□ -0.92
ITGB4-212ENST00000584558 ATRQ13535 2644 aa9.31□□□□□ -0.92
ITGB4-212ENST00000584558 TRBV6-5A0A0K0K1A5 114 aa9.3□□□□□ -0.92
ITGB4-212ENST00000584558 CXCL5P42830 114 aa9.3□□□□□ -0.92
ITGB4-212ENST00000584558 A0A0U1RRA0 63 aa9.3□□□□□ -0.92
ITGB4-212ENST00000584558 PSMB8P28062 276 aa9.3□□□□□ -0.92
ITGB4-212ENST00000584558 IGHV3-11P01762 117 aa9.3□□□□□ -0.92
ITGB4-212ENST00000584558 TIRAPP58753 221 aa9.3□□□□□ -0.92
ITGB4-212ENST00000584558 C4orf26Q17RF5 130 aa9.3□□□□□ -0.92
ITGB4-212ENST00000584558 SDIM1Q6ZPB5 146 aa9.3□□□□□ -0.92
ITGB4-212ENST00000584558 PEMTQ9UBM1 199 aa9.3□□□□□ -0.92
ITGB4-212ENST00000584558 M0QY20 66 aa9.29□□□□□ -0.92
ITGB4-212ENST00000584558 DPH3Q96FX2 82 aa9.29□□□□□ -0.92
ITGB4-212ENST00000584558 CITED2Q99967 270 aaPredicted RBP9.29□□□□□ -0.92
ITGB4-212ENST00000584558 BAALC-AS2P0C853 105 aa9.29□□□□□ -0.92
ITGB4-212ENST00000584558 HRCT1Q6UXD1 115 aa9.29□□□□□ -0.92
ITGB4-212ENST00000584558 TMEM89A2RUT3 159 aa9.28□□□□□ -0.92
ITGB4-212ENST00000584558 COX7A2LO14548 114 aa9.28□□□□□ -0.92
ITGB4-212ENST00000584558 F5H768 121 aa9.28□□□□□ -0.92
ITGB4-212ENST00000584558 C10orf99Q6UWK7 81 aa9.28□□□□□ -0.92
ITGB4-212ENST00000584558 VSIG2Q96IQ7 327 aa9.28□□□□□ -0.92
ITGB4-212ENST00000584558 ZNF702PQ9H963 129 aa9.28□□□□□ -0.92
ITGB4-212ENST00000584558 OXTP01178 125 aa9.27□□□□□ -0.93
ITGB4-212ENST00000584558 MRPS36P82909 103 aaKnown RBP9.27□□□□□ -0.93
ITGB4-212ENST00000584558 FAM19A4Q96LR4 140 aa9.27□□□□□ -0.93
ITGB4-212ENST00000584558 RNF152Q8N8N0 203 aa9.26□□□□□ -0.93
ITGB4-212ENST00000584558 ZNF625Q96I27 306 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms