RNA–Protein interactions for RNA: ENST00000584374.1

ITGB4-211, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 950 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-211ENST00000584374 FGF6P10767 208 aa11.56□□□□□ -0.56
ITGB4-211ENST00000584374 TTC32Q5I0X7 151 aa11.56□□□□□ -0.56
ITGB4-211ENST00000584374 LINC01556Q5JQF7 62 aa11.56□□□□□ -0.56
ITGB4-211ENST00000584374 C2orf66Q6UXQ4 117 aa11.56□□□□□ -0.56
ITGB4-211ENST00000584374 C6orf223Q8N319 242 aa11.56□□□□□ -0.56
ITGB4-211ENST00000584374 OR5A1Q8NGJ0 315 aa11.56□□□□□ -0.56
ITGB4-211ENST00000584374 K7EP13 123 aa11.55□□□□□ -0.56
ITGB4-211ENST00000584374 SERF1AO75920 110 aa11.55□□□□□ -0.56
ITGB4-211ENST00000584374 HBDP02042 147 aa11.55□□□□□ -0.56
ITGB4-211ENST00000584374 NDUFA6P56556 154 aa11.55□□□□□ -0.56
ITGB4-211ENST00000584374 SPANXA1Q9NS26 97 aa11.55□□□□□ -0.56
ITGB4-211ENST00000584374 ANGP03950 147 aaKnown RBP11.54□□□□□ -0.56
ITGB4-211ENST00000584374 DNAH10OSP0CZ25 163 aa11.54□□□□□ -0.56
ITGB4-211ENST00000584374 TNP2Q05952 138 aa11.54□□□□□ -0.56
ITGB4-211ENST00000584374 A0A1B0GUV1 79 aa11.53□□□□□ -0.56
ITGB4-211ENST00000584374 CRPP02741 224 aa11.53□□□□□ -0.56
ITGB4-211ENST00000584374 RBX1P62877 108 aa11.53□□□□□ -0.56
ITGB4-211ENST00000584374 RPL39P62891 51 aaKnown RBP11.53□□□□□ -0.56
ITGB4-211ENST00000584374 MPV17L2Q567V2 206 aa11.53□□□□□ -0.56
ITGB4-211ENST00000584374 PAPPA-AS1Q5QFB9 102 aa11.53□□□□□ -0.56
ITGB4-211ENST00000584374 Q6ZN92 141 aa11.53□□□□□ -0.56
ITGB4-211ENST00000584374 MRPL52Q86TS9 123 aaKnown RBP11.53□□□□□ -0.56
ITGB4-211ENST00000584374 SCGB3A1Q96QR1 104 aa11.53□□□□□ -0.56
ITGB4-211ENST00000584374 TIMM21Q9BVV7 248 aa11.53□□□□□ -0.56
ITGB4-211ENST00000584374 LRP1BQ9NZR2 4599 aa11.52□□□□□ -0.57
ITGB4-211ENST00000584374 TOMM6Q96B49 74 aa11.52□□□□□ -0.57
ITGB4-211ENST00000584374 URB1-AS1Q96HZ7 61 aa11.52□□□□□ -0.57
ITGB4-211ENST00000584374 Q8N976 141 aa11.51□□□□□ -0.57
ITGB4-211ENST00000584374 UBE2D4Q9Y2X8 147 aa11.51□□□□□ -0.57
ITGB4-211ENST00000584374 CSDC2Q9Y534 153 aaKnown RBP11.51□□□□□ -0.57
ITGB4-211ENST00000584374 PMCHL1Q16048 86 aa11.5□□□□□ -0.57
ITGB4-211ENST00000584374 KLK12Q9UKR0 248 aa11.5□□□□□ -0.57
ITGB4-211ENST00000584374 PYGO1Q9Y3Y4 419 aa11.5□□□□□ -0.57
ITGB4-211ENST00000584374 DNAH5Q8TE73 4624 aa11.49□□□□□ -0.57
ITGB4-211ENST00000584374 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.49□□□□□ -0.57
ITGB4-211ENST00000584374 ATP5LO75964 103 aa11.49□□□□□ -0.57
ITGB4-211ENST00000584374 NPSP0C0P6 89 aa11.49□□□□□ -0.57
ITGB4-211ENST00000584374 Q6ZRN7 208 aaPredicted RBP11.49□□□□□ -0.57
ITGB4-211ENST00000584374 ERASQ7Z444 233 aa11.49□□□□□ -0.57
ITGB4-211ENST00000584374 TMEM141Q96I45 108 aa11.49□□□□□ -0.57
ITGB4-211ENST00000584374 TIMM17AQ99595 171 aa11.49□□□□□ -0.57
ITGB4-211ENST00000584374 ZNF664Q8N3J9 261 aa11.48□□□□□ -0.57
ITGB4-211ENST00000584374 C2orf88Q9BSF0 95 aa11.48□□□□□ -0.57
ITGB4-211ENST00000584374 RYR1P21817 5038 aa11.47□□□□□ -0.57
ITGB4-211ENST00000584374 LEPROTL1O95214 131 aa11.47□□□□□ -0.57
ITGB4-211ENST00000584374 S100A2P29034 98 aa11.47□□□□□ -0.57
ITGB4-211ENST00000584374 COA6Q5JTJ3 125 aaKnown RBP11.47□□□□□ -0.57
ITGB4-211ENST00000584374 TEX43Q6ZNM6 134 aa11.47□□□□□ -0.57
ITGB4-211ENST00000584374 LINC00269Q8N2A0 174 aa11.47□□□□□ -0.57
ITGB4-211ENST00000584374 FAM19A2Q8N3H0 131 aa11.47□□□□□ -0.57
ITGB4-211ENST00000584374 UBE2WQ96B02 151 aa11.47□□□□□ -0.57
ITGB4-211ENST00000584374 RMI2Q96E14 147 aa11.47□□□□□ -0.57
ITGB4-211ENST00000584374 VCX2Q9H322 139 aa11.47□□□□□ -0.57
ITGB4-211ENST00000584374 HSPB8Q9UJY1 196 aa11.47□□□□□ -0.57
ITGB4-211ENST00000584374 IGLV4-60A0A075B6I1 120 aa11.46□□□□□ -0.57
ITGB4-211ENST00000584374 TRAV8-3A0A0A6YYJ7 113 aa11.46□□□□□ -0.57
ITGB4-211ENST00000584374 IGKV3OR2-268A0A0C4DH90 116 aa11.46□□□□□ -0.57
ITGB4-211ENST00000584374 MRPS36P82909 103 aaKnown RBP11.46□□□□□ -0.57
ITGB4-211ENST00000584374 Q8N3U1 123 aa11.46□□□□□ -0.57
ITGB4-211ENST00000584374 CDC42SE2Q9NRR3 84 aa11.46□□□□□ -0.57
ITGB4-211ENST00000584374 REG3AQ06141 175 aa11.45□□□□□ -0.58
ITGB4-211ENST00000584374 CLPSL2Q6UWE3 100 aa11.45□□□□□ -0.58
ITGB4-211ENST00000584374 Q6ZUT4 128 aa11.45□□□□□ -0.58
ITGB4-211ENST00000584374 IGLV4-3A0A075B6K6 122 aa11.44□□□□□ -0.58
ITGB4-211ENST00000584374 IGIPA6NJ69 53 aa11.44□□□□□ -0.58
ITGB4-211ENST00000584374 IFITM10A6NMD0 228 aa11.44□□□□□ -0.58
ITGB4-211ENST00000584374 IBA57-AS1B1ANH7 110 aa11.44□□□□□ -0.58
ITGB4-211ENST00000584374 LINC00310P59036 64 aa11.44□□□□□ -0.58
ITGB4-211ENST00000584374 MIAQ16674 131 aa11.44□□□□□ -0.58
ITGB4-211ENST00000584374 PDZD11Q5EBL8 140 aa11.44□□□□□ -0.58
ITGB4-211ENST00000584374 Q9HAA7 133 aa11.44□□□□□ -0.58
ITGB4-211ENST00000584374 TMA7Q9Y2S6 64 aaKnown RBP11.44□□□□□ -0.58
ITGB4-211ENST00000584374 HSPG2P98160 4391 aa11.44□□□□□ -0.58
ITGB4-211ENST00000584374 A0A096LNJ9 63 aa11.43□□□□□ -0.58
ITGB4-211ENST00000584374 NUPR1O60356 82 aa11.43□□□□□ -0.58
ITGB4-211ENST00000584374 FABP4P15090 132 aa11.43□□□□□ -0.58
ITGB4-211ENST00000584374 SS18Q15532 418 aa11.43□□□□□ -0.58
ITGB4-211ENST00000584374 NFE4Q86UQ8 179 aa11.43□□□□□ -0.58
ITGB4-211ENST00000584374 IFI27L1Q96BM0 104 aa11.43□□□□□ -0.58
ITGB4-211ENST00000584374 APOBP04114 4563 aaKnown RBP11.42□□□□□ -0.58
ITGB4-211ENST00000584374 TRAV8-4A0A0B4J246 113 aa11.42□□□□□ -0.58
ITGB4-211ENST00000584374 PRSS1P07477 247 aa11.42□□□□□ -0.58
ITGB4-211ENST00000584374 RNASE13Q5GAN3 156 aaKnown RBP11.42□□□□□ -0.58
ITGB4-211ENST00000584374 PACRGQ96M98 296 aaPredicted RBP11.42□□□□□ -0.58
ITGB4-211ENST00000584374 C1orf43Q9BWL3 253 aa11.42□□□□□ -0.58
ITGB4-211ENST00000584374 COX11Q9Y6N1 276 aa11.42□□□□□ -0.58
ITGB4-211ENST00000584374 TRAV13-1A0A0B4J241 112 aa11.41□□□□□ -0.58
ITGB4-211ENST00000584374 CCL25O15444 150 aa11.41□□□□□ -0.58
ITGB4-211ENST00000584374 OPRPNQ99935 248 aaPredicted RBP11.41□□□□□ -0.58
ITGB4-211ENST00000584374 TM2D2Q9BX73 214 aa11.41□□□□□ -0.58
ITGB4-211ENST00000584374 IGKV2D-24A0A075B6R9 120 aa11.4□□□□□ -0.58
ITGB4-211ENST00000584374 PMVKQ15126 192 aa11.4□□□□□ -0.58
ITGB4-211ENST00000584374 MAP1LC3CQ9BXW4 147 aa11.4□□□□□ -0.58
ITGB4-211ENST00000584374 PRR34Q9NV39 138 aa11.4□□□□□ -0.58
ITGB4-211ENST00000584374 PSCAO43653 123 aa11.39□□□□□ -0.59
ITGB4-211ENST00000584374 SNRPEP62304 92 aaKnown RBP11.39□□□□□ -0.59
ITGB4-211ENST00000584374 SEC11AP67812 179 aa11.39□□□□□ -0.59
ITGB4-211ENST00000584374 BAALCQ8WXS3 180 aa11.39□□□□□ -0.59
ITGB4-211ENST00000584374 LINC00959A0A1B0GUT2 108 aa11.38□□□□□ -0.59
ITGB4-211ENST00000584374 H0Y8G0 127 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms