RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 NKX2-5P52952 324 aaPredicted RBP4.9□□□□□ -1.63
SMCHD1-210ENST00000583800 BAGE2Q86Y30 109 aa4.9□□□□□ -1.63
SMCHD1-210ENST00000583800 C7orf33Q8WU49 177 aa4.9□□□□□ -1.63
SMCHD1-210ENST00000583800 RNF185Q96GF1 192 aa4.9□□□□□ -1.63
SMCHD1-210ENST00000583800 FAM218AQ96MZ4 157 aa4.9□□□□□ -1.63
SMCHD1-210ENST00000583800 DPH3P1Q9H4G8 78 aa4.9□□□□□ -1.63
SMCHD1-210ENST00000583800 CYTL1Q9NRR1 136 aa4.9□□□□□ -1.63
SMCHD1-210ENST00000583800 PLAC8Q9NZF1 115 aa4.9□□□□□ -1.63
SMCHD1-210ENST00000583800 IGKV2-24A0A0C4DH68 120 aa4.89□□□□□ -1.63
SMCHD1-210ENST00000583800 G3V3Q6 166 aa4.89□□□□□ -1.63
SMCHD1-210ENST00000583800 M0QY20 66 aa4.89□□□□□ -1.63
SMCHD1-210ENST00000583800 GZMBP10144 247 aa4.89□□□□□ -1.63
SMCHD1-210ENST00000583800 RPL13AP40429 203 aaKnown RBP4.89□□□□□ -1.63
SMCHD1-210ENST00000583800 PRR3P79522 188 aaKnown RBP4.89□□□□□ -1.63
SMCHD1-210ENST00000583800 COX6A2Q02221 97 aa4.89□□□□□ -1.63
SMCHD1-210ENST00000583800 KRTAP15-1Q3LI76 137 aa4.89□□□□□ -1.63
SMCHD1-210ENST00000583800 HIGD2BQ4VC39 106 aa4.89□□□□□ -1.63
SMCHD1-210ENST00000583800 C15orf56Q8N910 161 aa4.89□□□□□ -1.63
SMCHD1-210ENST00000583800 LINC01600Q96MT4 127 aa4.89□□□□□ -1.63
SMCHD1-210ENST00000583800 TMEM243Q9BU79 118 aa4.89□□□□□ -1.63
SMCHD1-210ENST00000583800 IGKV3OR2-268A0A0C4DH90 116 aa4.88□□□□□ -1.63
SMCHD1-210ENST00000583800 A0A1B0GUV1 79 aa4.88□□□□□ -1.63
SMCHD1-210ENST00000583800 ARPC5O15511 151 aa4.88□□□□□ -1.63
SMCHD1-210ENST00000583800 PFDN1O60925 122 aa4.88□□□□□ -1.63
SMCHD1-210ENST00000583800 SULT1A2P50226 295 aa4.88□□□□□ -1.63
SMCHD1-210ENST00000583800 NRACQ8N912 160 aa4.88□□□□□ -1.63
SMCHD1-210ENST00000583800 FAM213BQ8TBF2 198 aa4.88□□□□□ -1.63
SMCHD1-210ENST00000583800 GTSF1Q8WW33 167 aa4.88□□□□□ -1.63
SMCHD1-210ENST00000583800 H7C1H1 209 aa4.87□□□□□ -1.63
SMCHD1-210ENST00000583800 UBE2L6O14933 153 aa4.87□□□□□ -1.63
SMCHD1-210ENST00000583800 NDUFS6O75380 124 aaKnown RBP4.87□□□□□ -1.63
SMCHD1-210ENST00000583800 IGLC6P0CF74 106 aa4.87□□□□□ -1.63
SMCHD1-210ENST00000583800 TWIST1Q15672 202 aa4.87□□□□□ -1.63
SMCHD1-210ENST00000583800 RASL11AQ6T310 242 aa4.87□□□□□ -1.63
SMCHD1-210ENST00000583800 STPG4Q8N801 248 aa4.87□□□□□ -1.63
SMCHD1-210ENST00000583800 FER1L6-AS1Q8NA97 138 aa4.87□□□□□ -1.63
SMCHD1-210ENST00000583800 LYPD6BQ8NI32 183 aa4.87□□□□□ -1.63
SMCHD1-210ENST00000583800 SFT2D1Q8WV19 159 aa4.87□□□□□ -1.63
SMCHD1-210ENST00000583800 A0A096LNI7 61 aa4.86□□□□□ -1.63
SMCHD1-210ENST00000583800 A0A0J9YXV3 536 aa4.86□□□□□ -1.63
SMCHD1-210ENST00000583800 TEX46H3BTG2 121 aa4.86□□□□□ -1.63
SMCHD1-210ENST00000583800 RPL35P42766 123 aaKnown RBP4.86□□□□□ -1.63
SMCHD1-210ENST00000583800 RPS10P46783 165 aaKnown RBP4.86□□□□□ -1.63
SMCHD1-210ENST00000583800 TMUB2Q71RG4 321 aa4.86□□□□□ -1.63
SMCHD1-210ENST00000583800 LINC01561Q8N1V8 128 aa4.86□□□□□ -1.63
SMCHD1-210ENST00000583800 KCNRGQ8N5I3 272 aa4.86□□□□□ -1.63
SMCHD1-210ENST00000583800 OR2D3Q8NGH3 330 aa4.86□□□□□ -1.63
SMCHD1-210ENST00000583800 MBD3L1Q8WWY6 194 aa4.86□□□□□ -1.63
SMCHD1-210ENST00000583800 PGLYRP4Q96LB8 373 aa4.86□□□□□ -1.63
SMCHD1-210ENST00000583800 SMLR1H3BR10 107 aa4.85□□□□□ -1.63
SMCHD1-210ENST00000583800 CACNG7P62955 275 aa4.85□□□□□ -1.63
SMCHD1-210ENST00000583800 COTL1Q14019 142 aa4.85□□□□□ -1.63
SMCHD1-210ENST00000583800 CENPWQ5EE01 88 aa4.85□□□□□ -1.63
SMCHD1-210ENST00000583800 CHCHD10Q8WYQ3 142 aaPredicted RBP4.85□□□□□ -1.63
SMCHD1-210ENST00000583800 NIT2Q9NQR4 276 aa4.85□□□□□ -1.63
SMCHD1-210ENST00000583800 LPAP08519 4548 aa4.85□□□□□ -1.63
SMCHD1-210ENST00000583800 GVQW2A0A096LPI5 108 aaPredicted RBP4.84□□□□□ -1.63
SMCHD1-210ENST00000583800 C19orf71A6NCJ1 209 aa4.84□□□□□ -1.63
SMCHD1-210ENST00000583800 TRGC1P0CF51 173 aa4.84□□□□□ -1.63
SMCHD1-210ENST00000583800 KRTAP10-8P60410 259 aa4.84□□□□□ -1.63
SMCHD1-210ENST00000583800 RPS20P60866 119 aaKnown RBP4.84□□□□□ -1.63
SMCHD1-210ENST00000583800 SPINK6Q6UWN8 80 aa4.84□□□□□ -1.63
SMCHD1-210ENST00000583800 C11orf52Q96A22 123 aa4.84□□□□□ -1.63
SMCHD1-210ENST00000583800 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.83□□□□□ -1.64
SMCHD1-210ENST00000583800 TRAV26-2A0A0B4J265 109 aa4.83□□□□□ -1.64
SMCHD1-210ENST00000583800 IGKV2-29A2NJV5 120 aaPredicted RBP4.83□□□□□ -1.64
SMCHD1-210ENST00000583800 UMAD1C9J7I0 102 aa4.83□□□□□ -1.64
SMCHD1-210ENST00000583800 GAS8-AS1O95177 125 aa4.83□□□□□ -1.64
SMCHD1-210ENST00000583800 NTF3P20783 257 aa4.83□□□□□ -1.64
SMCHD1-210ENST00000583800 AMMECR1LQ6DCA0 310 aa4.83□□□□□ -1.64
SMCHD1-210ENST00000583800 REG3GQ6UW15 175 aa4.83□□□□□ -1.64
SMCHD1-210ENST00000583800 LYZL1Q6UWQ5 148 aa4.83□□□□□ -1.64
SMCHD1-210ENST00000583800 LINC00526Q96FQ7 95 aa4.83□□□□□ -1.64
SMCHD1-210ENST00000583800 GNG13Q9P2W3 67 aa4.83□□□□□ -1.64
SMCHD1-210ENST00000583800 RAB19A4D1S5 217 aa4.82□□□□□ -1.64
SMCHD1-210ENST00000583800 F2Z2F3 143 aa4.82□□□□□ -1.64
SMCHD1-210ENST00000583800 CCL20P78556 96 aa4.82□□□□□ -1.64
SMCHD1-210ENST00000583800 ZNF345Q14585 488 aa4.82□□□□□ -1.64
SMCHD1-210ENST00000583800 GATD1Q8NB37 220 aa4.82□□□□□ -1.64
SMCHD1-210ENST00000583800 RPL39LQ96EH5 51 aaKnown RBP4.82□□□□□ -1.64
SMCHD1-210ENST00000583800 MANBALQ9NQG1 85 aa4.82□□□□□ -1.64
SMCHD1-210ENST00000583800 TRBV20OR9-2A0A075B6H5 130 aa4.81□□□□□ -1.64
SMCHD1-210ENST00000583800 BCL2L11O43521 198 aa4.81□□□□□ -1.64
SMCHD1-210ENST00000583800 ATP5LO75964 103 aa4.81□□□□□ -1.64
SMCHD1-210ENST00000583800 IFNA1P01562 189 aa4.81□□□□□ -1.64
SMCHD1-210ENST00000583800 APCSP02743 223 aa4.81□□□□□ -1.64
SMCHD1-210ENST00000583800 FGF6P10767 208 aa4.81□□□□□ -1.64
SMCHD1-210ENST00000583800 CTRLP40313 264 aa4.81□□□□□ -1.64
SMCHD1-210ENST00000583800 XCL1P47992 114 aa4.81□□□□□ -1.64
SMCHD1-210ENST00000583800 GNG4P50150 75 aa4.81□□□□□ -1.64
SMCHD1-210ENST00000583800 CARD19Q96LW7 228 aa4.81□□□□□ -1.64
SMCHD1-210ENST00000583800 KANTRA0A1W2PQU2 76 aa4.8□□□□□ -1.64
SMCHD1-210ENST00000583800 CCL25O15444 150 aa4.8□□□□□ -1.64
SMCHD1-210ENST00000583800 NCR2O95944 276 aa4.8□□□□□ -1.64
SMCHD1-210ENST00000583800 KIAA1644Q3SXP7 199 aa4.8□□□□□ -1.64
SMCHD1-210ENST00000583800 Q6ZRP5 223 aa4.8□□□□□ -1.64
SMCHD1-210ENST00000583800 C9orf62Q8N4C0 152 aa4.8□□□□□ -1.64
SMCHD1-210ENST00000583800 OR5A1Q8NGJ0 315 aa4.8□□□□□ -1.64
SMCHD1-210ENST00000583800 SMIM12Q96EX1 92 aa4.8□□□□□ -1.64
SMCHD1-210ENST00000583800 LINC00474Q9P2X8 69 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms