RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 Q6ZN92 141 aa6.27□□□□□ -1.41
UBBP4-201ENST00000583708 ERASQ7Z444 233 aa6.27□□□□□ -1.41
UBBP4-201ENST00000583708 BAGE3Q86Y29 109 aa6.27□□□□□ -1.41
UBBP4-201ENST00000583708 Q8N976 141 aa6.27□□□□□ -1.41
UBBP4-201ENST00000583708 TOMM6Q96B49 74 aa6.27□□□□□ -1.41
UBBP4-201ENST00000583708 IGLV4-60A0A075B6I1 120 aa6.26□□□□□ -1.41
UBBP4-201ENST00000583708 C1orf196B1AJZ1 125 aa6.26□□□□□ -1.41
UBBP4-201ENST00000583708 ENHOQ6UWT2 76 aa6.26□□□□□ -1.41
UBBP4-201ENST00000583708 LINC00269Q8N2A0 174 aa6.26□□□□□ -1.41
UBBP4-201ENST00000583708 UBE2WQ96B02 151 aa6.26□□□□□ -1.41
UBBP4-201ENST00000583708 C1orf43Q9BWL3 253 aa6.26□□□□□ -1.41
UBBP4-201ENST00000583708 KRTAP1-5Q9BYS1 174 aa6.26□□□□□ -1.41
UBBP4-201ENST00000583708 IGIPA6NJ69 53 aa6.25□□□□□ -1.41
UBBP4-201ENST00000583708 EREGO14944 169 aa6.25□□□□□ -1.41
UBBP4-201ENST00000583708 ATP5LO75964 103 aa6.25□□□□□ -1.41
UBBP4-201ENST00000583708 HBDP02042 147 aa6.25□□□□□ -1.41
UBBP4-201ENST00000583708 SEC11AP67812 179 aa6.25□□□□□ -1.41
UBBP4-201ENST00000583708 SS18Q15532 418 aa6.25□□□□□ -1.41
UBBP4-201ENST00000583708 SCGB3A1Q96QR1 104 aa6.25□□□□□ -1.41
UBBP4-201ENST00000583708 VCX2Q9H322 139 aa6.25□□□□□ -1.41
UBBP4-201ENST00000583708 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.24□□□□□ -1.41
UBBP4-201ENST00000583708 PSCAO43653 123 aa6.24□□□□□ -1.41
UBBP4-201ENST00000583708 HSBP1O75506 76 aa6.24□□□□□ -1.41
UBBP4-201ENST00000583708 RPL39P62891 51 aaKnown RBP6.24□□□□□ -1.41
UBBP4-201ENST00000583708 COA6Q5JTJ3 125 aaKnown RBP6.24□□□□□ -1.41
UBBP4-201ENST00000583708 Q6ZRN7 208 aaPredicted RBP6.24□□□□□ -1.41
UBBP4-201ENST00000583708 PACRGQ96M98 296 aaPredicted RBP6.24□□□□□ -1.41
UBBP4-201ENST00000583708 C2orf88Q9BSF0 95 aa6.24□□□□□ -1.41
UBBP4-201ENST00000583708 IGKV2D-24A0A075B6R9 120 aa6.23□□□□□ -1.41
UBBP4-201ENST00000583708 LINC00959A0A1B0GUT2 108 aa6.23□□□□□ -1.41
UBBP4-201ENST00000583708 C14orf177Q52M58 125 aa6.23□□□□□ -1.41
UBBP4-201ENST00000583708 CFAP161Q6P656 301 aa6.23□□□□□ -1.41
UBBP4-201ENST00000583708 TEX43Q6ZNM6 134 aa6.23□□□□□ -1.41
UBBP4-201ENST00000583708 DEFB104AQ8WTQ1 72 aa6.23□□□□□ -1.41
UBBP4-201ENST00000583708 URB1-AS1Q96HZ7 61 aa6.23□□□□□ -1.41
UBBP4-201ENST00000583708 AMELXQ99217 191 aa6.23□□□□□ -1.41
UBBP4-201ENST00000583708 IGLV4-3A0A075B6K6 122 aa6.22□□□□□ -1.41
UBBP4-201ENST00000583708 RTL8CO15255 209 aa6.22□□□□□ -1.41
UBBP4-201ENST00000583708 HIST1H2BKO60814 126 aa6.22□□□□□ -1.41
UBBP4-201ENST00000583708 HIST1H2BJP06899 126 aa6.22□□□□□ -1.41
UBBP4-201ENST00000583708 HIST1H2BOP23527 126 aa6.22□□□□□ -1.41
UBBP4-201ENST00000583708 HIST1H2BBP33778 126 aa6.22□□□□□ -1.41
UBBP4-201ENST00000583708 HIST1H2BDP58876 126 aa6.22□□□□□ -1.41
UBBP4-201ENST00000583708 HIST1H2BCP62807 126 aa6.22□□□□□ -1.41
UBBP4-201ENST00000583708 HIST2H2BEQ16778 126 aa6.22□□□□□ -1.41
UBBP4-201ENST00000583708 PDZD11Q5EBL8 140 aa6.22□□□□□ -1.41
UBBP4-201ENST00000583708 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.22□□□□□ -1.41
UBBP4-201ENST00000583708 CD164L2Q6UWJ8 174 aa6.22□□□□□ -1.41
UBBP4-201ENST00000583708 FAM19A3Q7Z5A8 133 aa6.22□□□□□ -1.41
UBBP4-201ENST00000583708 LINC01561Q8N1V8 128 aa6.22□□□□□ -1.41
UBBP4-201ENST00000583708 Q8N3U1 123 aa6.22□□□□□ -1.41
UBBP4-201ENST00000583708 HIST1H2BHQ93079 126 aa6.22□□□□□ -1.41
UBBP4-201ENST00000583708 HIST1H2BNQ99877 126 aa6.22□□□□□ -1.41
UBBP4-201ENST00000583708 HIST1H2BMQ99879 126 aa6.22□□□□□ -1.41
UBBP4-201ENST00000583708 Q9HAA7 133 aa6.22□□□□□ -1.41
UBBP4-201ENST00000583708 RYR2Q92736 4967 aa6.22□□□□□ -1.41
UBBP4-201ENST00000583708 PMVKQ15126 192 aa6.21□□□□□ -1.42
UBBP4-201ENST00000583708 HSPB8Q9UJY1 196 aa6.21□□□□□ -1.42
UBBP4-201ENST00000583708 DNAH2Q9P225 4427 aa6.21□□□□□ -1.42
UBBP4-201ENST00000583708 DNAH17Q9UFH2 4485 aa6.21□□□□□ -1.42
UBBP4-201ENST00000583708 DNAH10Q8IVF4 4471 aa6.2□□□□□ -1.42
UBBP4-201ENST00000583708 PRSS29PA6NIE9 313 aa6.2□□□□□ -1.42
UBBP4-201ENST00000583708 IFITM10A6NMD0 228 aa6.2□□□□□ -1.42
UBBP4-201ENST00000583708 SERF1AO75920 110 aa6.2□□□□□ -1.42
UBBP4-201ENST00000583708 KRTAP26-1Q6PEX3 210 aa6.2□□□□□ -1.42
UBBP4-201ENST00000583708 Q6ZUT4 128 aa6.2□□□□□ -1.42
UBBP4-201ENST00000583708 CHCHD10Q8WYQ3 142 aaPredicted RBP6.2□□□□□ -1.42
UBBP4-201ENST00000583708 FAM104AQ969W3 186 aa6.2□□□□□ -1.42
UBBP4-201ENST00000583708 PGPEP1Q9NXJ5 209 aa6.2□□□□□ -1.42
UBBP4-201ENST00000583708 A0A096LNJ9 63 aa6.19□□□□□ -1.42
UBBP4-201ENST00000583708 F8WDY8 70 aa6.19□□□□□ -1.42
UBBP4-201ENST00000583708 LEPROTL1O95214 131 aa6.19□□□□□ -1.42
UBBP4-201ENST00000583708 APOMO95445 188 aa6.19□□□□□ -1.42
UBBP4-201ENST00000583708 UBE2D1P51668 147 aa6.19□□□□□ -1.42
UBBP4-201ENST00000583708 HERVK_113P63121 156 aa6.19□□□□□ -1.42
UBBP4-201ENST00000583708 NTN5Q8WTR8 489 aaPredicted RBP6.19□□□□□ -1.42
UBBP4-201ENST00000583708 CST9LQ9H4G1 147 aa6.19□□□□□ -1.42
UBBP4-201ENST00000583708 HYDINQ4G0P3 5121 aa6.18□□□□□ -1.42
UBBP4-201ENST00000583708 A0A087WTM6 91 aa6.18□□□□□ -1.42
UBBP4-201ENST00000583708 TRAV13-1A0A0B4J241 112 aa6.18□□□□□ -1.42
UBBP4-201ENST00000583708 TRAV12-1A0A0B4J245 112 aa6.18□□□□□ -1.42
UBBP4-201ENST00000583708 LRCOL1A6NCL2 159 aa6.18□□□□□ -1.42
UBBP4-201ENST00000583708 COX7A2LO14548 114 aa6.18□□□□□ -1.42
UBBP4-201ENST00000583708 AKR1D1P51857 326 aa6.18□□□□□ -1.42
UBBP4-201ENST00000583708 CDPF1Q6NVV7 123 aa6.18□□□□□ -1.42
UBBP4-201ENST00000583708 IFI27L1Q96BM0 104 aa6.18□□□□□ -1.42
UBBP4-201ENST00000583708 FRAS1Q86XX4 4008 aa6.17□□□□□ -1.42
UBBP4-201ENST00000583708 IGHV3OR16-9A0A0B4J2B5 98 aa6.17□□□□□ -1.42
UBBP4-201ENST00000583708 IGHV1-58A0A0C4DH39 117 aa6.17□□□□□ -1.42
UBBP4-201ENST00000583708 IGKV3OR2-268A0A0C4DH90 116 aa6.17□□□□□ -1.42
UBBP4-201ENST00000583708 TINCRA0A1B0GVN0 87 aa6.17□□□□□ -1.42
UBBP4-201ENST00000583708 GAGE12HA6NDE8 117 aa6.17□□□□□ -1.42
UBBP4-201ENST00000583708 PRSS1P07477 247 aa6.17□□□□□ -1.42
UBBP4-201ENST00000583708 FOXI1Q12951 378 aa6.17□□□□□ -1.42
UBBP4-201ENST00000583708 CLPSL2Q6UWE3 100 aa6.17□□□□□ -1.42
UBBP4-201ENST00000583708 LINC00173Q6ZV60 143 aa6.17□□□□□ -1.42
UBBP4-201ENST00000583708 BAALCQ8WXS3 180 aa6.17□□□□□ -1.42
UBBP4-201ENST00000583708 OPRPNQ99935 248 aaPredicted RBP6.17□□□□□ -1.42
UBBP4-201ENST00000583708 GEMIN7Q9H840 131 aaKnown RBP6.17□□□□□ -1.42
UBBP4-201ENST00000583708 IGLV10-54A0A075B6I4 117 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms