RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 HIST3H2BBQ8N257 126 aa11.12□□□□□ -0.63
CDK5RAP3-228ENST00000583363 FAM104AQ969W3 186 aa11.12□□□□□ -0.63
CDK5RAP3-228ENST00000583363 Q9H8V8 135 aa11.12□□□□□ -0.63
CDK5RAP3-228ENST00000583363 SPANXA1Q9NS26 97 aa11.12□□□□□ -0.63
CDK5RAP3-228ENST00000583363 DNAH10Q8IVF4 4471 aa11.11□□□□□ -0.63
CDK5RAP3-228ENST00000583363 IGLV4-60A0A075B6I1 120 aa11.11□□□□□ -0.63
CDK5RAP3-228ENST00000583363 A0A087WX48 190 aa11.11□□□□□ -0.63
CDK5RAP3-228ENST00000583363 LY6G6CO95867 125 aa11.11□□□□□ -0.63
CDK5RAP3-228ENST00000583363 LINC01556Q5JQF7 62 aa11.11□□□□□ -0.63
CDK5RAP3-228ENST00000583363 DGAT2L7PQ6IED9 249 aa11.11□□□□□ -0.63
CDK5RAP3-228ENST00000583363 Q8N3U1 123 aa11.11□□□□□ -0.63
CDK5RAP3-228ENST00000583363 TMEM141Q96I45 108 aa11.11□□□□□ -0.63
CDK5RAP3-228ENST00000583363 PACRGQ96M98 296 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP3-228ENST00000583363 TIMM17AQ99595 171 aa11.11□□□□□ -0.63
CDK5RAP3-228ENST00000583363 LEPROTL1O95214 131 aa11.1□□□□□ -0.63
CDK5RAP3-228ENST00000583363 NPSP0C0P6 89 aa11.1□□□□□ -0.63
CDK5RAP3-228ENST00000583363 Q8N976 141 aa11.1□□□□□ -0.63
CDK5RAP3-228ENST00000583363 OR5A1Q8NGJ0 315 aa11.1□□□□□ -0.63
CDK5RAP3-228ENST00000583363 TMEM101Q96IK0 257 aa11.1□□□□□ -0.63
CDK5RAP3-228ENST00000583363 OPRPNQ99935 248 aaPredicted RBP11.1□□□□□ -0.63
CDK5RAP3-228ENST00000583363 CDC42SE2Q9NRR3 84 aa11.1□□□□□ -0.63
CDK5RAP3-228ENST00000583363 ATP5LO75964 103 aa11.09□□□□□ -0.63
CDK5RAP3-228ENST00000583363 IGHV3-30P01768 117 aa11.09□□□□□ -0.63
CDK5RAP3-228ENST00000583363 IGHV3-33P01772 117 aa11.09□□□□□ -0.63
CDK5RAP3-228ENST00000583363 IGHV3-30-3P0DP02 117 aa11.09□□□□□ -0.63
CDK5RAP3-228ENST00000583363 IGHV3-30-5P0DP03 117 aa11.09□□□□□ -0.63
CDK5RAP3-228ENST00000583363 FABP4P15090 132 aa11.09□□□□□ -0.63
CDK5RAP3-228ENST00000583363 MRPS36P82909 103 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-228ENST00000583363 LINC00173Q6ZV60 143 aa11.09□□□□□ -0.63
CDK5RAP3-228ENST00000583363 ZNF664Q8N3J9 261 aa11.09□□□□□ -0.63
CDK5RAP3-228ENST00000583363 IGLV4-3A0A075B6K6 122 aa11.08□□□□□ -0.64
CDK5RAP3-228ENST00000583363 HSPB8Q9UJY1 196 aa11.08□□□□□ -0.64
CDK5RAP3-228ENST00000583363 IFITM10A6NMD0 228 aa11.07□□□□□ -0.64
CDK5RAP3-228ENST00000583363 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-228ENST00000583363 S100A2P29034 98 aa11.07□□□□□ -0.64
CDK5RAP3-228ENST00000583363 IFI27L1Q96BM0 104 aa11.07□□□□□ -0.64
CDK5RAP3-228ENST00000583363 Q6ZUT4 128 aa11.06□□□□□ -0.64
CDK5RAP3-228ENST00000583363 AMELXQ99217 191 aa11.06□□□□□ -0.64
CDK5RAP3-228ENST00000583363 HIST1H2BLQ99880 126 aa11.06□□□□□ -0.64
CDK5RAP3-228ENST00000583363 DNAH6Q9C0G6 4158 aa11.05□□□□□ -0.64
CDK5RAP3-228ENST00000583363 ANGP03950 147 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-228ENST00000583363 PAPPA-AS1Q5QFB9 102 aa11.05□□□□□ -0.64
CDK5RAP3-228ENST00000583363 BAALCQ8WXS3 180 aa11.05□□□□□ -0.64
CDK5RAP3-228ENST00000583363 VCX2Q9H322 139 aa11.05□□□□□ -0.64
CDK5RAP3-228ENST00000583363 KLK12Q9UKR0 248 aa11.05□□□□□ -0.64
CDK5RAP3-228ENST00000583363 TRAV9-2A0A087WT02 112 aa11.04□□□□□ -0.64
CDK5RAP3-228ENST00000583363 K7EP13 123 aa11.04□□□□□ -0.64
CDK5RAP3-228ENST00000583363 RNASE13Q5GAN3 156 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-228ENST00000583363 ZC2HC1BQ5TFG8 222 aa11.04□□□□□ -0.64
CDK5RAP3-228ENST00000583363 Q6ZN92 141 aa11.04□□□□□ -0.64
CDK5RAP3-228ENST00000583363 LINC00269Q8N2A0 174 aa11.04□□□□□ -0.64
CDK5RAP3-228ENST00000583363 PCLOQ9Y6V0 5065 aa11.03□□□□□ -0.64
CDK5RAP3-228ENST00000583363 PRSS1P07477 247 aa11.03□□□□□ -0.64
CDK5RAP3-228ENST00000583363 TEX43Q6ZNM6 134 aa11.03□□□□□ -0.64
CDK5RAP3-228ENST00000583363 CST9LQ9H4G1 147 aa11.03□□□□□ -0.64
CDK5RAP3-228ENST00000583363 PRR34Q9NV39 138 aa11.03□□□□□ -0.64
CDK5RAP3-228ENST00000583363 PRSS29PA6NIE9 313 aa11.02□□□□□ -0.65
CDK5RAP3-228ENST00000583363 IBA57-AS1B1ANH7 110 aa11.02□□□□□ -0.65
CDK5RAP3-228ENST00000583363 REG3AQ06141 175 aa11.02□□□□□ -0.65
CDK5RAP3-228ENST00000583363 PMVKQ15126 192 aa11.02□□□□□ -0.65
CDK5RAP3-228ENST00000583363 ENHOQ6UWT2 76 aa11.02□□□□□ -0.65
CDK5RAP3-228ENST00000583363 C10orf126Q8N4M7 172 aa11.02□□□□□ -0.65
CDK5RAP3-228ENST00000583363 MAP1LC3CQ9BXW4 147 aa11.02□□□□□ -0.65
CDK5RAP3-228ENST00000583363 TRAV12-1A0A0B4J245 112 aa11□□□□□ -0.65
CDK5RAP3-228ENST00000583363 NBDYA0A0U1RRE5 68 aa11□□□□□ -0.65
CDK5RAP3-228ENST00000583363 C3orf79P0CE67 100 aa11□□□□□ -0.65
CDK5RAP3-228ENST00000583363 UBE2WQ96B02 151 aa11□□□□□ -0.65
CDK5RAP3-228ENST00000583363 HECTD4Q9Y4D8 3996 aa11□□□□□ -0.65
CDK5RAP3-228ENST00000583363 IGKV3OR2-268A0A0C4DH90 116 aa10.99□□□□□ -0.65
CDK5RAP3-228ENST00000583363 LINC00959A0A1B0GUT2 108 aa10.99□□□□□ -0.65
CDK5RAP3-228ENST00000583363 SYS1-DBNDD2H3BUS1 97 aa10.99□□□□□ -0.65
CDK5RAP3-228ENST00000583363 CLPSL2Q6UWE3 100 aa10.99□□□□□ -0.65
CDK5RAP3-228ENST00000583363 C2orf88Q9BSF0 95 aa10.99□□□□□ -0.65
CDK5RAP3-228ENST00000583363 KRTAP1-5Q9BYS1 174 aa10.99□□□□□ -0.65
CDK5RAP3-228ENST00000583363 KIAA1109Q2LD37 5005 aa10.98□□□□□ -0.65
CDK5RAP3-228ENST00000583363 TRAV13-1A0A0B4J241 112 aa10.98□□□□□ -0.65
CDK5RAP3-228ENST00000583363 UBE2D1P51668 147 aa10.98□□□□□ -0.65
CDK5RAP3-228ENST00000583363 SPATA12Q7Z6I5 190 aa10.98□□□□□ -0.65
CDK5RAP3-228ENST00000583363 TRAV8-3A0A0A6YYJ7 113 aa10.97□□□□□ -0.65
CDK5RAP3-228ENST00000583363 CCL25O15444 150 aa10.97□□□□□ -0.65
CDK5RAP3-228ENST00000583363 CRPP02741 224 aa10.97□□□□□ -0.65
CDK5RAP3-228ENST00000583363 KRTDAPP60985 99 aa10.97□□□□□ -0.65
CDK5RAP3-228ENST00000583363 MIAQ16674 131 aa10.97□□□□□ -0.65
CDK5RAP3-228ENST00000583363 TTC32Q5I0X7 151 aa10.97□□□□□ -0.65
CDK5RAP3-228ENST00000583363 PET117Q6UWS5 81 aa10.97□□□□□ -0.65
CDK5RAP3-228ENST00000583363 FAM19A3Q7Z5A8 133 aa10.97□□□□□ -0.65
CDK5RAP3-228ENST00000583363 OR10D4PQ8NGN7 298 aa10.97□□□□□ -0.65
CDK5RAP3-228ENST00000583363 TRAV8-4A0A0B4J246 113 aa10.96□□□□□ -0.65
CDK5RAP3-228ENST00000583363 H0Y8G0 127 aa10.96□□□□□ -0.65
CDK5RAP3-228ENST00000583363 SS18Q15532 418 aa10.96□□□□□ -0.65
CDK5RAP3-228ENST00000583363 Q6ZR54 194 aa10.96□□□□□ -0.65
CDK5RAP3-228ENST00000583363 CHTOPQ9Y3Y2 248 aaKnown RBP10.96□□□□□ -0.65
CDK5RAP3-228ENST00000583363 M0R2N4 97 aa10.95□□□□□ -0.66
CDK5RAP3-228ENST00000583363 ODF1Q14990 250 aa10.95□□□□□ -0.66
CDK5RAP3-228ENST00000583363 LINC00242Q5T6M2 205 aa10.95□□□□□ -0.66
CDK5RAP3-228ENST00000583363 A0A0J9YXV3 536 aa10.94□□□□□ -0.66
CDK5RAP3-228ENST00000583363 LOC105371267A0A1B0GV96 52 aa10.94□□□□□ -0.66
CDK5RAP3-228ENST00000583363 IGLV4-69A0A075B6H9 119 aa10.93□□□□□ -0.66
CDK5RAP3-228ENST00000583363 IGLV10-54A0A075B6I4 117 aa10.93□□□□□ -0.66
CDK5RAP3-228ENST00000583363 TINCRA0A1B0GVN0 87 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms