RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 CKS2P33552 79 aa7.83□□□□□ -1.16
TOP3A-215ENST00000583328 RPS10P46783 165 aaKnown RBP7.83□□□□□ -1.16
TOP3A-215ENST00000583328 COX19Q49B96 90 aa7.83□□□□□ -1.16
TOP3A-215ENST00000583328 MPV17L2Q567V2 206 aa7.83□□□□□ -1.16
TOP3A-215ENST00000583328 ST20Q9HBF5 79 aa7.83□□□□□ -1.16
TOP3A-215ENST00000583328 TRBV6-8A0A0A6YYG3 113 aa7.82□□□□□ -1.16
TOP3A-215ENST00000583328 SDHAF1A6NFY7 115 aa7.82□□□□□ -1.16
TOP3A-215ENST00000583328 D6R8Y8 96 aa7.82□□□□□ -1.16
TOP3A-215ENST00000583328 MIAQ16674 131 aa7.82□□□□□ -1.16
TOP3A-215ENST00000583328 TMEM136Q6ZRR5 245 aa7.82□□□□□ -1.16
TOP3A-215ENST00000583328 NRACQ8N912 160 aa7.82□□□□□ -1.16
TOP3A-215ENST00000583328 TRBV24-1A0A075B6N3 115 aa7.81□□□□□ -1.16
TOP3A-215ENST00000583328 TRBV25-1A0A075B6N4 114 aa7.81□□□□□ -1.16
TOP3A-215ENST00000583328 A0A087WYN8 130 aa7.81□□□□□ -1.16
TOP3A-215ENST00000583328 CIRBPQ14011 172 aaKnown RBP7.81□□□□□ -1.16
TOP3A-215ENST00000583328 COTL1Q14019 142 aa7.81□□□□□ -1.16
TOP3A-215ENST00000583328 ODF1Q14990 250 aa7.81□□□□□ -1.16
TOP3A-215ENST00000583328 ORMDL3Q8N138 153 aa7.81□□□□□ -1.16
TOP3A-215ENST00000583328 LINC01600Q96MT4 127 aa7.81□□□□□ -1.16
TOP3A-215ENST00000583328 CHCHD5Q9BSY4 110 aa7.81□□□□□ -1.16
TOP3A-215ENST00000583328 GNB1LQ9BYB4 327 aa7.81□□□□□ -1.16
TOP3A-215ENST00000583328 TGIF2-C20orf24A0A0A6YYL0 155 aa7.8□□□□□ -1.16
TOP3A-215ENST00000583328 IGHV1-24A0A0C4DH33 117 aa7.8□□□□□ -1.16
TOP3A-215ENST00000583328 TRBV27A0A0K0K1C4 114 aa7.8□□□□□ -1.16
TOP3A-215ENST00000583328 I3L3M4 83 aa7.8□□□□□ -1.16
TOP3A-215ENST00000583328 PHOX2AO14813 284 aa7.8□□□□□ -1.16
TOP3A-215ENST00000583328 TNFRSF6BO95407 300 aa7.8□□□□□ -1.16
TOP3A-215ENST00000583328 MT-ND6P03923 174 aa7.8□□□□□ -1.16
TOP3A-215ENST00000583328 POLR2KP53803 58 aaKnown RBP7.8□□□□□ -1.16
TOP3A-215ENST00000583328 PKIAP61925 76 aa7.8□□□□□ -1.16
TOP3A-215ENST00000583328 SUMO2P61956 95 aaKnown RBP7.8□□□□□ -1.16
TOP3A-215ENST00000583328 IQCJQ1A5X6 159 aa7.8□□□□□ -1.16
TOP3A-215ENST00000583328 CLPSL2Q6UWE3 100 aa7.8□□□□□ -1.16
TOP3A-215ENST00000583328 NTM-AS1Q6ZSK4 140 aa7.8□□□□□ -1.16
TOP3A-215ENST00000583328 C7orf33Q8WU49 177 aa7.8□□□□□ -1.16
TOP3A-215ENST00000583328 C20orf78Q9BR46 151 aa7.8□□□□□ -1.16
TOP3A-215ENST00000583328 SMCO4Q9NRQ5 59 aa7.8□□□□□ -1.16
TOP3A-215ENST00000583328 LAMTOR2Q9Y2Q5 125 aa7.8□□□□□ -1.16
TOP3A-215ENST00000583328 IGHV3-64A0A075B6Q5 118 aa7.79□□□□□ -1.16
TOP3A-215ENST00000583328 NPYP01303 97 aa7.79□□□□□ -1.16
TOP3A-215ENST00000583328 CHTF8P0CG12 524 aa7.79□□□□□ -1.16
TOP3A-215ENST00000583328 PMCHP20382 165 aa7.79□□□□□ -1.16
TOP3A-215ENST00000583328 RPL32P62910 135 aaKnown RBP7.79□□□□□ -1.16
TOP3A-215ENST00000583328 PRELID3AQ96N28 172 aa7.79□□□□□ -1.16
TOP3A-215ENST00000583328 hDV102S1A0JD36 115 aa7.78□□□□□ -1.16
TOP3A-215ENST00000583328 VCYO14598 125 aa7.78□□□□□ -1.16
TOP3A-215ENST00000583328 APCSP02743 223 aa7.78□□□□□ -1.16
TOP3A-215ENST00000583328 AMTP48728 403 aa7.78□□□□□ -1.16
TOP3A-215ENST00000583328 CNBPP62633 177 aaKnown RBP7.78□□□□□ -1.16
TOP3A-215ENST00000583328 KRTAP26-1Q6PEX3 210 aa7.78□□□□□ -1.16
TOP3A-215ENST00000583328 CBLN2Q8IUK8 224 aa7.78□□□□□ -1.16
TOP3A-215ENST00000583328 LINC00269Q8N2A0 174 aa7.78□□□□□ -1.16
TOP3A-215ENST00000583328 YPEL4Q96NS1 127 aa7.78□□□□□ -1.16
TOP3A-215ENST00000583328 TMEM243Q9BU79 118 aa7.78□□□□□ -1.16
TOP3A-215ENST00000583328 AP5S1Q9NUS5 200 aa7.78□□□□□ -1.16
TOP3A-215ENST00000583328 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.77□□□□□ -1.17
TOP3A-215ENST00000583328 TSHBP01222 138 aa7.77□□□□□ -1.17
TOP3A-215ENST00000583328 SMIM2Q9BVW6 85 aa7.77□□□□□ -1.17
TOP3A-215ENST00000583328 MRPL18Q9H0U6 180 aaKnown RBP7.77□□□□□ -1.17
TOP3A-215ENST00000583328 PRR34Q9NV39 138 aa7.77□□□□□ -1.17
TOP3A-215ENST00000583328 A0A0J9YXV3 536 aa7.76□□□□□ -1.17
TOP3A-215ENST00000583328 RBX1P62877 108 aa7.76□□□□□ -1.17
TOP3A-215ENST00000583328 GAGE6Q13070 117 aa7.76□□□□□ -1.17
TOP3A-215ENST00000583328 SPACA4Q8TDM5 124 aa7.76□□□□□ -1.17
TOP3A-215ENST00000583328 KIR2DL4Q99706 377 aa7.76□□□□□ -1.17
TOP3A-215ENST00000583328 MAP1LC3AQ9H492 121 aa7.76□□□□□ -1.17
TOP3A-215ENST00000583328 PLAC8Q9NZF1 115 aa7.76□□□□□ -1.17
TOP3A-215ENST00000583328 IGLV10-54A0A075B6I4 117 aa7.75□□□□□ -1.17
TOP3A-215ENST00000583328 PRSS47A8MTI9 375 aa7.75□□□□□ -1.17
TOP3A-215ENST00000583328 UBE2L6O14933 153 aa7.75□□□□□ -1.17
TOP3A-215ENST00000583328 TCAPO15273 167 aa7.75□□□□□ -1.17
TOP3A-215ENST00000583328 FCER1GP30273 86 aa7.75□□□□□ -1.17
TOP3A-215ENST00000583328 FABP9Q0Z7S8 132 aa7.75□□□□□ -1.17
TOP3A-215ENST00000583328 KIAA1644Q3SXP7 199 aa7.75□□□□□ -1.17
TOP3A-215ENST00000583328 TRAPPC1Q9Y5R8 145 aa7.75□□□□□ -1.17
TOP3A-215ENST00000583328 H7C423 109 aa7.74□□□□□ -1.17
TOP3A-215ENST00000583328 ESDP10768 282 aa7.74□□□□□ -1.17
TOP3A-215ENST00000583328 KRTAP10-8P60410 259 aa7.74□□□□□ -1.17
TOP3A-215ENST00000583328 A0A1B0GUV1 79 aa7.73□□□□□ -1.17
TOP3A-215ENST00000583328 SLPIP03973 132 aa7.73□□□□□ -1.17
TOP3A-215ENST00000583328 REG3AQ06141 175 aa7.73□□□□□ -1.17
TOP3A-215ENST00000583328 ALKBH7Q9BT30 221 aaPredicted RBP7.73□□□□□ -1.17
TOP3A-215ENST00000583328 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.72□□□□□ -1.17
TOP3A-215ENST00000583328 LOC389332A0A1B0GUA5 103 aa7.72□□□□□ -1.17
TOP3A-215ENST00000583328 IGKV2-29A2NJV5 120 aaPredicted RBP7.72□□□□□ -1.17
TOP3A-215ENST00000583328 ATP6V1G1O75348 118 aa7.72□□□□□ -1.17
TOP3A-215ENST00000583328 S100A1P23297 94 aa7.72□□□□□ -1.17
TOP3A-215ENST00000583328 PRR3P79522 188 aaKnown RBP7.72□□□□□ -1.17
TOP3A-215ENST00000583328 MAJINQ3KP22 176 aa7.72□□□□□ -1.17
TOP3A-215ENST00000583328 REG3GQ6UW15 175 aa7.72□□□□□ -1.17
TOP3A-215ENST00000583328 Q8N8P6 123 aa7.72□□□□□ -1.17
TOP3A-215ENST00000583328 NXT2Q9NPJ8 142 aaKnown RBP7.72□□□□□ -1.17
TOP3A-215ENST00000583328 TRAV8-4A0A0B4J246 113 aa7.71□□□□□ -1.18
TOP3A-215ENST00000583328 K7EMI3 77 aa7.71□□□□□ -1.18
TOP3A-215ENST00000583328 ZNF25P17030 456 aaPredicted RBP7.71□□□□□ -1.18
TOP3A-215ENST00000583328 RAB5AP20339 215 aa7.71□□□□□ -1.18
TOP3A-215ENST00000583328 COX6A2Q02221 97 aa7.71□□□□□ -1.18
TOP3A-215ENST00000583328 SMAGPQ0VAQ4 97 aa7.71□□□□□ -1.18
TOP3A-215ENST00000583328 AMMECR1LQ6DCA0 310 aa7.71□□□□□ -1.18
TOP3A-215ENST00000583328 TMEM18Q96B42 140 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms