RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 Q6ZS46 218 aa4.24□□□□□ -1.73
RTTN-209ENST00000583043 WFDC11Q8NEX6 87 aa4.24□□□□□ -1.73
RTTN-209ENST00000583043 ZNF625Q96I27 306 aaPredicted RBP4.24□□□□□ -1.73
RTTN-209ENST00000583043 SELENOKQ9Y6D0 94 aa4.24□□□□□ -1.73
RTTN-209ENST00000583043 IGLV5-39A0A0G2JS06 123 aa4.24□□□□□ -1.73
RTTN-209ENST00000583043 PFN2P35080 140 aa4.24□□□□□ -1.73
RTTN-209ENST00000583043 MIR7-3HGQ8N6C7 128 aa4.24□□□□□ -1.73
RTTN-209ENST00000583043 C11orf72Q8NBR9 251 aa4.24□□□□□ -1.73
RTTN-209ENST00000583043 TLN1Q9Y490 2541 aaKnown RBP4.24□□□□□ -1.73
RTTN-209ENST00000583043 LELP1Q5T871 98 aa4.23□□□□□ -1.73
RTTN-209ENST00000583043 C1orf43Q9BWL3 253 aa4.23□□□□□ -1.73
RTTN-209ENST00000583043 CUL9Q8IWT3 2517 aa4.23□□□□□ -1.73
RTTN-209ENST00000583043 DSCAML1Q8TD84 2053 aa4.23□□□□□ -1.73
RTTN-209ENST00000583043 F8WEM9 126 aa4.23□□□□□ -1.73
RTTN-209ENST00000583043 NDUFC2O95298 119 aa4.23□□□□□ -1.73
RTTN-209ENST00000583043 LINC00242Q5T6M2 205 aa4.23□□□□□ -1.73
RTTN-209ENST00000583043 DSCR8Q96T75 97 aa4.23□□□□□ -1.73
RTTN-209ENST00000583043 NKAPP1Q8N9T2 125 aa4.23□□□□□ -1.73
RTTN-209ENST00000583043 A0A087WZ39 114 aa4.23□□□□□ -1.73
RTTN-209ENST00000583043 RPL28P46779 137 aaKnown RBP4.23□□□□□ -1.73
RTTN-209ENST00000583043 SHISA2Q6UWI4 295 aa4.23□□□□□ -1.73
RTTN-209ENST00000583043 C1orf158Q8N1D5 194 aa4.23□□□□□ -1.73
RTTN-209ENST00000583043 TRIAP1O43715 76 aa4.23□□□□□ -1.73
RTTN-209ENST00000583043 XCL1P47992 114 aa4.23□□□□□ -1.73
RTTN-209ENST00000583043 RNASE13Q5GAN3 156 aaKnown RBP4.23□□□□□ -1.73
RTTN-209ENST00000583043 ACACBO00763 2458 aa4.22□□□□□ -1.73
RTTN-209ENST00000583043 SPAG11BQ08648 103 aa4.22□□□□□ -1.73
RTTN-209ENST00000583043 C10orf99Q6UWK7 81 aa4.22□□□□□ -1.73
RTTN-209ENST00000583043 NBASA2RRP1 2371 aa4.22□□□□□ -1.73
RTTN-209ENST00000583043 C5orf38Q86SI9 138 aa4.22□□□□□ -1.73
RTTN-209ENST00000583043 SMIM1B2RUZ4 78 aa4.22□□□□□ -1.73
RTTN-209ENST00000583043 SBSPONQ8IVN8 264 aa4.22□□□□□ -1.73
RTTN-209ENST00000583043 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.22□□□□□ -1.735e-6■■■■□ 24
RTTN-209ENST00000583043 A0A096LNT2 108 aa4.22□□□□□ -1.73
RTTN-209ENST00000583043 PIEZO1Q92508 2521 aa4.21□□□□□ -1.73
RTTN-209ENST00000583043 REG3AQ06141 175 aa4.21□□□□□ -1.73
RTTN-209ENST00000583043 J3QL48 77 aa4.21□□□□□ -1.74
RTTN-209ENST00000583043 SPTAN1Q13813 2472 aaKnown RBP4.21□□□□□ -1.74
RTTN-209ENST00000583043 CENPFP49454 3210 aa4.21□□□□□ -1.74
RTTN-209ENST00000583043 LINC00959A0A1B0GUT2 108 aa4.21□□□□□ -1.74
RTTN-209ENST00000583043 C14orf177Q52M58 125 aa4.21□□□□□ -1.74
RTTN-209ENST00000583043 DIRC1Q969H9 104 aa4.21□□□□□ -1.74
RTTN-209ENST00000583043 DEFB104AQ8WTQ1 72 aa4.21□□□□□ -1.74
RTTN-209ENST00000583043 CAMK2N2Q96S95 79 aa4.21□□□□□ -1.74
RTTN-209ENST00000583043 H3BNG1 76 aa4.2□□□□□ -1.74
RTTN-209ENST00000583043 hADV29S1A0JD25 119 aa4.2□□□□□ -1.74
RTTN-209ENST00000583043 CCL18P55774 89 aa4.2□□□□□ -1.74
RTTN-209ENST00000583043 CHCHD10Q8WYQ3 142 aaPredicted RBP4.2□□□□□ -1.74
RTTN-209ENST00000583043 PROK1P58294 105 aa4.2□□□□□ -1.74
RTTN-209ENST00000583043 CEMP1Q6PRD7 247 aaPredicted RBP4.2□□□□□ -1.74
RTTN-209ENST00000583043 AKAP6Q13023 2319 aa4.2□□□□□ -1.74
RTTN-209ENST00000583043 LINC00482Q8N8I6 264 aa4.2□□□□□ -1.74
RTTN-209ENST00000583043 C9orf153Q5TBE3 101 aa4.19□□□□□ -1.74
RTTN-209ENST00000583043 FHL2Q14192 279 aa4.19□□□□□ -1.74
RTTN-209ENST00000583043 LINC01600Q96MT4 127 aa4.19□□□□□ -1.74
RTTN-209ENST00000583043 LECT2O14960 151 aa4.19□□□□□ -1.74
RTTN-209ENST00000583043 RBM3P98179 157 aaKnown RBP4.19□□□□□ -1.74
RTTN-209ENST00000583043 PLXNB1O43157 2135 aa4.19□□□□□ -1.74
RTTN-209ENST00000583043 TSPEAR-AS2P59090 65 aa4.18□□□□□ -1.74
RTTN-209ENST00000583043 COX7BP24311 80 aa4.18□□□□□ -1.74
RTTN-209ENST00000583043 DEFB135Q30KP9 77 aa4.18□□□□□ -1.74
RTTN-209ENST00000583043 Q6ZQT7 251 aa4.18□□□□□ -1.74
RTTN-209ENST00000583043 CLEC2BQ92478 149 aa4.18□□□□□ -1.74
RTTN-209ENST00000583043 LY6G6CO95867 125 aa4.18□□□□□ -1.74
RTTN-209ENST00000583043 FUSP35637 526 aaKnown RBP eCLIP4.18□□□□□ -1.74
RTTN-209ENST00000583043 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.17□□□□□ -1.74
RTTN-209ENST00000583043 C2orf48Q96LS8 159 aa4.17□□□□□ -1.74
RTTN-209ENST00000583043 C11orf68Q9H3H3 251 aaKnown RBP4.17□□□□□ -1.74
RTTN-209ENST00000583043 HIST1H4AP62805 103 aaKnown RBP4.17□□□□□ -1.74
RTTN-209ENST00000583043 EGFEM1PQ0D2K5 195 aa4.17□□□□□ -1.74
RTTN-209ENST00000583043 Q6JHZ5 121 aa4.17□□□□□ -1.74
RTTN-209ENST00000583043 UQCRQO14949 82 aa4.17□□□□□ -1.74
RTTN-209ENST00000583043 LY6G6DO95868 133 aa4.17□□□□□ -1.74
RTTN-209ENST00000583043 BDP1A6H8Y1 2624 aa4.17□□□□□ -1.74
RTTN-209ENST00000583043 IGHV4-28A0A0C4DH34 117 aa4.17□□□□□ -1.74
RTTN-209ENST00000583043 A0A1B0GW54 56 aa4.17□□□□□ -1.74
RTTN-209ENST00000583043 NDUFV3P56181 108 aaKnown RBP4.17□□□□□ -1.74
RTTN-209ENST00000583043 PRO0461Q9UI25 63 aa4.17□□□□□ -1.74
RTTN-209ENST00000583043 C18orf65Q6ZTR6 163 aa4.17□□□□□ -1.74
RTTN-209ENST00000583043 M0R378 163 aa4.16□□□□□ -1.74
RTTN-209ENST00000583043 LINC00269Q8N2A0 174 aa4.16□□□□□ -1.74
RTTN-209ENST00000583043 NAV2Q8IVL1 2488 aa4.16□□□□□ -1.74
RTTN-209ENST00000583043 MED13LQ71F56 2210 aa4.16□□□□□ -1.74
RTTN-209ENST00000583043 BCE1O60756 84 aa4.16□□□□□ -1.74
RTTN-209ENST00000583043 TRAV10A0A0B4J240 114 aa4.16□□□□□ -1.74
RTTN-209ENST00000583043 RBMY1FQ15415 496 aaKnown RBP4.16□□□□□ -1.74
RTTN-209ENST00000583043 TRBV7-6A0A0J9YX20 115 aa4.16□□□□□ -1.74
RTTN-209ENST00000583043 TRBV10-3A0A0K0K1G6 114 aa4.16□□□□□ -1.74
RTTN-209ENST00000583043 IGKV2D-24A0A075B6R9 120 aa4.15□□□□□ -1.74
RTTN-209ENST00000583043 KRTAP10-9P60411 292 aa4.15□□□□□ -1.74
RTTN-209ENST00000583043 DHRS4-AS1Q9P1J3 65 aa4.15□□□□□ -1.74
RTTN-209ENST00000583043 KLK12Q9UKR0 248 aa4.15□□□□□ -1.74
RTTN-209ENST00000583043 IGF2RP11717 2491 aa4.15□□□□□ -1.75
RTTN-209ENST00000583043 IGHV3OR16-9A0A0B4J2B5 98 aa4.15□□□□□ -1.75
RTTN-209ENST00000583043 ETDCA0A1B0GVM5 59 aa4.15□□□□□ -1.75
RTTN-209ENST00000583043 C11orf45Q8TAV5 145 aa4.15□□□□□ -1.75
RTTN-209ENST00000583043 TEX49A0A1B0GTD5 131 aa4.15□□□□□ -1.75
RTTN-209ENST00000583043 EDN2P20800 178 aa4.15□□□□□ -1.75
RTTN-209ENST00000583043 CHD9Q3L8U1 2897 aa4.15□□□□□ -1.75
RTTN-209ENST00000583043 LINC00612Q8N6U2 182 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms