RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 TRAV9-2A0A087WT02 112 aa5.99□□□□□ -1.45
PDLIM1P3-201ENST00000582370 NBDYA0A0U1RRE5 68 aa5.99□□□□□ -1.45
PDLIM1P3-201ENST00000582370 LOC389332A0A1B0GUA5 103 aa5.99□□□□□ -1.45
PDLIM1P3-201ENST00000582370 IFI27P40305 119 aaPredicted RBP5.99□□□□□ -1.45
PDLIM1P3-201ENST00000582370 NIT1Q86X76 327 aa5.99□□□□□ -1.45
PDLIM1P3-201ENST00000582370 TMEM101Q96IK0 257 aa5.99□□□□□ -1.45
PDLIM1P3-201ENST00000582370 SPANXA1Q9NS26 97 aa5.99□□□□□ -1.45
PDLIM1P3-201ENST00000582370 CYSLTR1Q9Y271 337 aa5.99□□□□□ -1.45
PDLIM1P3-201ENST00000582370 A0A1B0GUV1 79 aa5.98□□□□□ -1.45
PDLIM1P3-201ENST00000582370 CCL25O15444 150 aa5.98□□□□□ -1.45
PDLIM1P3-201ENST00000582370 ATP5LO75964 103 aa5.98□□□□□ -1.45
PDLIM1P3-201ENST00000582370 TSHBP01222 138 aa5.98□□□□□ -1.45
PDLIM1P3-201ENST00000582370 HBDP02042 147 aa5.98□□□□□ -1.45
PDLIM1P3-201ENST00000582370 RNASEKQ6P5S7 137 aaKnown RBP5.98□□□□□ -1.45
PDLIM1P3-201ENST00000582370 MRPL52Q86TS9 123 aaKnown RBP5.98□□□□□ -1.45
PDLIM1P3-201ENST00000582370 C10orf126Q8N4M7 172 aa5.98□□□□□ -1.45
PDLIM1P3-201ENST00000582370 C20orf203Q8NBC4 194 aa5.98□□□□□ -1.45
PDLIM1P3-201ENST00000582370 HSPB8Q9UJY1 196 aa5.98□□□□□ -1.45
PDLIM1P3-201ENST00000582370 MRPS16Q9Y3D3 137 aaKnown RBP5.98□□□□□ -1.45
PDLIM1P3-201ENST00000582370 PYGO1Q9Y3Y4 419 aa5.98□□□□□ -1.45
PDLIM1P3-201ENST00000582370 A0A087WX48 190 aa5.97□□□□□ -1.45
PDLIM1P3-201ENST00000582370 LOC100131303A0A0U1RQF7 123 aa5.97□□□□□ -1.45
PDLIM1P3-201ENST00000582370 KRTAP10-2P60368 255 aa5.97□□□□□ -1.45
PDLIM1P3-201ENST00000582370 SERTAD4-AS1Q5TG53 156 aa5.97□□□□□ -1.45
PDLIM1P3-201ENST00000582370 AMMECR1LQ6DCA0 310 aa5.97□□□□□ -1.45
PDLIM1P3-201ENST00000582370 DGAT2L7PQ6IED9 249 aa5.97□□□□□ -1.45
PDLIM1P3-201ENST00000582370 Q6ZN92 141 aa5.97□□□□□ -1.45
PDLIM1P3-201ENST00000582370 ERASQ7Z444 233 aa5.97□□□□□ -1.45
PDLIM1P3-201ENST00000582370 TMEM141Q96I45 108 aa5.97□□□□□ -1.45
PDLIM1P3-201ENST00000582370 TIMM17AQ99595 171 aa5.97□□□□□ -1.45
PDLIM1P3-201ENST00000582370 CHCHD5Q9BSY4 110 aa5.97□□□□□ -1.45
PDLIM1P3-201ENST00000582370 IGHV3-38A0A0C4DH36 116 aa5.96□□□□□ -1.46
PDLIM1P3-201ENST00000582370 GAS8-AS1O95177 125 aa5.96□□□□□ -1.46
PDLIM1P3-201ENST00000582370 S100A2P29034 98 aa5.96□□□□□ -1.46
PDLIM1P3-201ENST00000582370 TTC32Q5I0X7 151 aa5.96□□□□□ -1.46
PDLIM1P3-201ENST00000582370 C2orf66Q6UXQ4 117 aa5.96□□□□□ -1.46
PDLIM1P3-201ENST00000582370 TOMM6Q96B49 74 aa5.96□□□□□ -1.46
PDLIM1P3-201ENST00000582370 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.95□□□□□ -1.46
PDLIM1P3-201ENST00000582370 SIVA1O15304 175 aa5.95□□□□□ -1.46
PDLIM1P3-201ENST00000582370 SERF1AO75920 110 aa5.95□□□□□ -1.46
PDLIM1P3-201ENST00000582370 DNAH10OSP0CZ25 163 aa5.95□□□□□ -1.46
PDLIM1P3-201ENST00000582370 XGP55808 180 aa5.95□□□□□ -1.46
PDLIM1P3-201ENST00000582370 NDUFA6P56556 154 aa5.95□□□□□ -1.46
PDLIM1P3-201ENST00000582370 SEC11AP67812 179 aa5.95□□□□□ -1.46
PDLIM1P3-201ENST00000582370 MRPS36P82909 103 aaKnown RBP5.95□□□□□ -1.46
PDLIM1P3-201ENST00000582370 ESRGQ1W209 222 aa5.95□□□□□ -1.46
PDLIM1P3-201ENST00000582370 LINC01556Q5JQF7 62 aa5.95□□□□□ -1.46
PDLIM1P3-201ENST00000582370 OR5A1Q8NGJ0 315 aa5.95□□□□□ -1.46
PDLIM1P3-201ENST00000582370 TMEM262E9PQX1 116 aa5.94□□□□□ -1.46
PDLIM1P3-201ENST00000582370 LEPROTL1O95214 131 aa5.94□□□□□ -1.46
PDLIM1P3-201ENST00000582370 NTM-AS1Q6ZSK4 140 aa5.94□□□□□ -1.46
PDLIM1P3-201ENST00000582370 SCGB3A1Q96QR1 104 aa5.94□□□□□ -1.46
PDLIM1P3-201ENST00000582370 C2orf88Q9BSF0 95 aa5.94□□□□□ -1.46
PDLIM1P3-201ENST00000582370 Q9UF83 564 aa5.94□□□□□ -1.46
PDLIM1P3-201ENST00000582370 FGF6P10767 208 aa5.93□□□□□ -1.46
PDLIM1P3-201ENST00000582370 RMI2Q96E14 147 aa5.93□□□□□ -1.46
PDLIM1P3-201ENST00000582370 UBE2D4Q9Y2X8 147 aa5.93□□□□□ -1.46
PDLIM1P3-201ENST00000582370 LINC00588Q9Y4M8 146 aa5.93□□□□□ -1.46
PDLIM1P3-201ENST00000582370 COX11Q9Y6N1 276 aa5.93□□□□□ -1.46
PDLIM1P3-201ENST00000582370 RNF213Q63HN8 5207 aa5.92□□□□□ -1.46
PDLIM1P3-201ENST00000582370 TRAV8-3A0A0A6YYJ7 113 aa5.92□□□□□ -1.46
PDLIM1P3-201ENST00000582370 TRAV8-4A0A0B4J246 113 aa5.92□□□□□ -1.46
PDLIM1P3-201ENST00000582370 C5orf52A6NGY3 159 aa5.92□□□□□ -1.46
PDLIM1P3-201ENST00000582370 IGIPA6NJ69 53 aa5.92□□□□□ -1.46
PDLIM1P3-201ENST00000582370 FAM229AH3BQW9 127 aa5.92□□□□□ -1.46
PDLIM1P3-201ENST00000582370 PDZD11Q5EBL8 140 aa5.92□□□□□ -1.46
PDLIM1P3-201ENST00000582370 TEX43Q6ZNM6 134 aa5.92□□□□□ -1.46
PDLIM1P3-201ENST00000582370 ZNF664Q8N3J9 261 aa5.92□□□□□ -1.46
PDLIM1P3-201ENST00000582370 URB1-AS1Q96HZ7 61 aa5.92□□□□□ -1.46
PDLIM1P3-201ENST00000582370 MAP1LC3CQ9BXW4 147 aa5.92□□□□□ -1.46
PDLIM1P3-201ENST00000582370 VCX2Q9H322 139 aa5.92□□□□□ -1.46
PDLIM1P3-201ENST00000582370 Q9H8V8 135 aa5.92□□□□□ -1.46
PDLIM1P3-201ENST00000582370 LRP1Q07954 4544 aaKnown RBP5.91□□□□□ -1.46
PDLIM1P3-201ENST00000582370 KRTAP29-1A8MX34 341 aaPredicted RBP5.91□□□□□ -1.46
PDLIM1P3-201ENST00000582370 CRPP02741 224 aa5.91□□□□□ -1.46
PDLIM1P3-201ENST00000582370 MIAQ16674 131 aa5.91□□□□□ -1.46
PDLIM1P3-201ENST00000582370 CDPF1Q6NVV7 123 aa5.91□□□□□ -1.46
PDLIM1P3-201ENST00000582370 NFE4Q86UQ8 179 aa5.91□□□□□ -1.46
PDLIM1P3-201ENST00000582370 IFI27L1Q96BM0 104 aa5.91□□□□□ -1.46
PDLIM1P3-201ENST00000582370 CDC42SE2Q9NRR3 84 aa5.91□□□□□ -1.46
PDLIM1P3-201ENST00000582370 FAT3Q8TDW7 4589 aa5.91□□□□□ -1.46
PDLIM1P3-201ENST00000582370 TRAV12-1A0A0B4J245 112 aa5.9□□□□□ -1.46
PDLIM1P3-201ENST00000582370 C20orf202A1L168 122 aa5.9□□□□□ -1.46
PDLIM1P3-201ENST00000582370 ANGP03950 147 aaKnown RBP5.9□□□□□ -1.46
PDLIM1P3-201ENST00000582370 RBX1P62877 108 aa5.9□□□□□ -1.46
PDLIM1P3-201ENST00000582370 PMVKQ15126 192 aa5.9□□□□□ -1.46
PDLIM1P3-201ENST00000582370 PGPEP1Q9NXJ5 209 aa5.9□□□□□ -1.46
PDLIM1P3-201ENST00000582370 PLA2G2DQ9UNK4 145 aa5.9□□□□□ -1.46
PDLIM1P3-201ENST00000582370 DNAH8Q96JB1 4490 aa5.89□□□□□ -1.47
PDLIM1P3-201ENST00000582370 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.89□□□□□ -1.47
PDLIM1P3-201ENST00000582370 IGKV2-29A2NJV5 120 aaPredicted RBP5.89□□□□□ -1.47
PDLIM1P3-201ENST00000582370 IBA57-AS1B1ANH7 110 aa5.89□□□□□ -1.47
PDLIM1P3-201ENST00000582370 PRSS1P07477 247 aa5.89□□□□□ -1.47
PDLIM1P3-201ENST00000582370 SNRPEP62304 92 aaKnown RBP5.89□□□□□ -1.47
PDLIM1P3-201ENST00000582370 GAGE6Q13070 117 aa5.89□□□□□ -1.47
PDLIM1P3-201ENST00000582370 SS18Q15532 418 aa5.89□□□□□ -1.47
PDLIM1P3-201ENST00000582370 MPV17L2Q567V2 206 aa5.89□□□□□ -1.47
PDLIM1P3-201ENST00000582370 WFDC10BQ8IUB3 73 aa5.89□□□□□ -1.47
PDLIM1P3-201ENST00000582370 HIST3H2BBQ8N257 126 aa5.89□□□□□ -1.47
PDLIM1P3-201ENST00000582370 AMELXQ99217 191 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms