RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 PLEKHB2Q96CS7 222 aa5.8□□□□□ -1.48
CDH8-207ENST00000582242 LRBAP50851 2863 aa5.79□□□□□ -1.48
CDH8-207ENST00000582242 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.79□□□□□ -1.48
CDH8-207ENST00000582242 M0R2P5 195 aa5.79□□□□□ -1.48
CDH8-207ENST00000582242 LEPROTO15243 131 aa5.79□□□□□ -1.48
CDH8-207ENST00000582242 UBE2D1P51668 147 aa5.79□□□□□ -1.48
CDH8-207ENST00000582242 C10orf99Q6UWK7 81 aa5.79□□□□□ -1.48
CDH8-207ENST00000582242 DNAJC30Q96LL9 226 aa5.79□□□□□ -1.48
CDH8-207ENST00000582242 VCX2Q9H322 139 aa5.79□□□□□ -1.48
CDH8-207ENST00000582242 NBASA2RRP1 2371 aa5.79□□□□□ -1.48
CDH8-207ENST00000582242 TRAV25A0A0B4J276 109 aa5.78□□□□□ -1.48
CDH8-207ENST00000582242 A0A0J9YY99 117 aa5.78□□□□□ -1.48
CDH8-207ENST00000582242 H3BMM0 161 aa5.78□□□□□ -1.48
CDH8-207ENST00000582242 J3QQQ9 107 aa5.78□□□□□ -1.48
CDH8-207ENST00000582242 INSP01308 110 aa5.78□□□□□ -1.48
CDH8-207ENST00000582242 DEFB131AP59861 70 aa5.78□□□□□ -1.48
CDH8-207ENST00000582242 RPL39P62891 51 aaKnown RBP5.78□□□□□ -1.48
CDH8-207ENST00000582242 MORN3Q6PF18 240 aaPredicted RBP5.78□□□□□ -1.48
CDH8-207ENST00000582242 DCHS2Q6V1P9 2916 aa5.78□□□□□ -1.48
CDH8-207ENST00000582242 NRGNQ92686 78 aa5.78□□□□□ -1.48
CDH8-207ENST00000582242 MRPL16Q9NX20 251 aaKnown RBP5.78□□□□□ -1.48
CDH8-207ENST00000582242 SMG1Q96Q15 3661 aaKnown RBP5.78□□□□□ -1.48
CDH8-207ENST00000582242 MED13LQ71F56 2210 aa5.77□□□□□ -1.49
CDH8-207ENST00000582242 TRBV20-1A0A075B6N2 111 aa5.77□□□□□ -1.49
CDH8-207ENST00000582242 TMEM223A0PJW6 202 aa5.77□□□□□ -1.49
CDH8-207ENST00000582242 TMEM238C9JI98 176 aa5.77□□□□□ -1.49
CDH8-207ENST00000582242 SMAGPQ0VAQ4 97 aa5.77□□□□□ -1.49
CDH8-207ENST00000582242 SLC25A29Q8N8R3 303 aa5.77□□□□□ -1.49
CDH8-207ENST00000582242 SPANXA1Q9NS26 97 aa5.77□□□□□ -1.49
CDH8-207ENST00000582242 PRRC2AP48634 2157 aaKnown RBP5.76□□□□□ -1.49
CDH8-207ENST00000582242 CR1P17927 2039 aa5.76□□□□□ -1.49
CDH8-207ENST00000582242 KNCNA6PVL3 124 aa5.76□□□□□ -1.49
CDH8-207ENST00000582242 CD28P10747 220 aa5.76□□□□□ -1.49
CDH8-207ENST00000582242 CMC4P56277 68 aaPredicted RBP5.76□□□□□ -1.49
CDH8-207ENST00000582242 ATP6V0E2Q8NHE4 81 aa5.76□□□□□ -1.49
CDH8-207ENST00000582242 LAMA5O15230 3695 aa5.76□□□□□ -1.49
CDH8-207ENST00000582242 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.75□□□□□ -1.49
CDH8-207ENST00000582242 LOC100131303A0A0U1RQF7 123 aa5.75□□□□□ -1.49
CDH8-207ENST00000582242 IGHV3-30P01768 117 aa5.75□□□□□ -1.49
CDH8-207ENST00000582242 IGHV3-30-5P0DP03 117 aa5.75□□□□□ -1.49
CDH8-207ENST00000582242 ZNF22P17026 224 aaPredicted RBP5.75□□□□□ -1.49
CDH8-207ENST00000582242 TMEM61Q8N0U2 210 aa5.75□□□□□ -1.49
CDH8-207ENST00000582242 KLHL30-AS1Q8NEE0 82 aa5.75□□□□□ -1.49
CDH8-207ENST00000582242 ZNRF2Q8NHG8 242 aa5.75□□□□□ -1.49
CDH8-207ENST00000582242 AMELXQ99217 191 aa5.75□□□□□ -1.49
CDH8-207ENST00000582242 AKAP6Q13023 2319 aa5.74□□□□□ -1.49
CDH8-207ENST00000582242 TRAV26-1A0A087WT03 109 aa5.74□□□□□ -1.49
CDH8-207ENST00000582242 A0A0B4J2C4 111 aa5.74□□□□□ -1.49
CDH8-207ENST00000582242 H3BMG7 143 aa5.74□□□□□ -1.49
CDH8-207ENST00000582242 RS1O15537 224 aa5.74□□□□□ -1.49
CDH8-207ENST00000582242 TSPAN13O95857 204 aa5.74□□□□□ -1.49
CDH8-207ENST00000582242 IGHV3-53P01767 116 aa5.74□□□□□ -1.49
CDH8-207ENST00000582242 P0DMU3 169 aa5.74□□□□□ -1.49
CDH8-207ENST00000582242 FAM231AP0DMU4 169 aa5.74□□□□□ -1.49
CDH8-207ENST00000582242 FAM231CP0DMU5 169 aa5.74□□□□□ -1.49
CDH8-207ENST00000582242 EMP1P54849 157 aa5.74□□□□□ -1.49
CDH8-207ENST00000582242 UBE2D3P61077 147 aa5.74□□□□□ -1.49
CDH8-207ENST00000582242 UBE2D2P62837 147 aa5.74□□□□□ -1.49
CDH8-207ENST00000582242 MRPS36P82909 103 aaKnown RBP5.74□□□□□ -1.49
CDH8-207ENST00000582242 DEFB114Q30KQ6 69 aa5.74□□□□□ -1.49
CDH8-207ENST00000582242 NDUFA11Q86Y39 141 aa5.74□□□□□ -1.49
CDH8-207ENST00000582242 C10orf126Q8N4M7 172 aa5.74□□□□□ -1.49
CDH8-207ENST00000582242 TYMSOSQ8TAI1 123 aa5.74□□□□□ -1.49
CDH8-207ENST00000582242 TIMM21Q9BVV7 248 aa5.74□□□□□ -1.49
CDH8-207ENST00000582242 PRO1854Q9UHT4 67 aa5.74□□□□□ -1.49
CDH8-207ENST00000582242 DCHS1Q96JQ0 3298 aa5.73□□□□□ -1.49
CDH8-207ENST00000582242 LOC107984156A0A0G2JMH3 177 aa5.73□□□□□ -1.49
CDH8-207ENST00000582242 TINCRA0A1B0GVN0 87 aa5.73□□□□□ -1.49
CDH8-207ENST00000582242 APOMO95445 188 aa5.73□□□□□ -1.49
CDH8-207ENST00000582242 RBMY1A1P0DJD3 496 aaKnown RBP5.73□□□□□ -1.49
CDH8-207ENST00000582242 RBMY1CP0DJD4 496 aa5.73□□□□□ -1.49
CDH8-207ENST00000582242 SCGB1A1P11684 91 aa5.73□□□□□ -1.49
CDH8-207ENST00000582242 TSPEAR-AS2P59090 65 aa5.73□□□□□ -1.49
CDH8-207ENST00000582242 RBMY1FQ15415 496 aaKnown RBP5.73□□□□□ -1.49
CDH8-207ENST00000582242 DEFB136Q30KP8 78 aa5.73□□□□□ -1.49
CDH8-207ENST00000582242 ARL17AQ8IVW1 177 aa5.73□□□□□ -1.49
CDH8-207ENST00000582242 LINC01587Q99440 93 aa5.73□□□□□ -1.49
CDH8-207ENST00000582242 DOPEY1Q5JWR5 2465 aa5.73□□□□□ -1.49
CDH8-207ENST00000582242 TACC2O95359 2948 aa5.73□□□□□ -1.49
CDH8-207ENST00000582242 AGRNO00468 2067 aa5.73□□□□□ -1.49
CDH8-207ENST00000582242 A0A0J9YXV3 536 aa5.72□□□□□ -1.49
CDH8-207ENST00000582242 RBMY1BA6NDE4 496 aaKnown RBP5.72□□□□□ -1.49
CDH8-207ENST00000582242 RBMY1EA6NEQ0 496 aaKnown RBP5.72□□□□□ -1.49
CDH8-207ENST00000582242 CYSRT1A8MQ03 144 aa5.72□□□□□ -1.49
CDH8-207ENST00000582242 TIMM17BO60830 172 aa5.72□□□□□ -1.49
CDH8-207ENST00000582242 RBMY1DP0C7P1 496 aaKnown RBP5.72□□□□□ -1.49
CDH8-207ENST00000582242 WFDC2Q14508 124 aa5.72□□□□□ -1.49
CDH8-207ENST00000582242 CFAP126Q5VTH2 177 aa5.72□□□□□ -1.49
CDH8-207ENST00000582242 C11orf72Q8NBR9 251 aa5.72□□□□□ -1.49
CDH8-207ENST00000582242 SPANXDQ9BXN6 97 aa5.72□□□□□ -1.49
CDH8-207ENST00000582242 SPANXCQ9NY87 97 aa5.72□□□□□ -1.49
CDH8-207ENST00000582242 PRO0461Q9UI25 63 aa5.72□□□□□ -1.49
CDH8-207ENST00000582242 IGHV1-58A0A0C4DH39 117 aa5.71□□□□□ -1.5
CDH8-207ENST00000582242 TRBV10-1A0A0K0K1A3 114 aa5.71□□□□□ -1.5
CDH8-207ENST00000582242 M0QXV9 152 aa5.71□□□□□ -1.5
CDH8-207ENST00000582242 HTN1P15515 57 aa5.71□□□□□ -1.5
CDH8-207ENST00000582242 PSMB2P49721 201 aa5.71□□□□□ -1.5
CDH8-207ENST00000582242 COPS9Q8WXC6 57 aa5.71□□□□□ -1.5
CDH8-207ENST00000582242 GEMIN7Q9H840 131 aaKnown RBP5.71□□□□□ -1.5
CDH8-207ENST00000582242 UBE2D4Q9Y2X8 147 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms