RNA–Protein interactions for RNA: ENST00000580569.1

RFFL-207, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene RFFL, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-207ENST00000580569 PLNP26678 52 aa5.6□□□□□ -1.51
RFFL-207ENST00000580569 INSL3P51460 131 aa5.6□□□□□ -1.51
RFFL-207ENST00000580569 PMVKQ15126 192 aa5.6□□□□□ -1.51
RFFL-207ENST00000580569 MPV17L2Q567V2 206 aa5.6□□□□□ -1.51
RFFL-207ENST00000580569 COL5A1-AS1Q5SY13 56 aa5.6□□□□□ -1.51
RFFL-207ENST00000580569 DEFB104AQ8WTQ1 72 aa5.6□□□□□ -1.51
RFFL-207ENST00000580569 CST9LQ9H4G1 147 aa5.6□□□□□ -1.51
RFFL-207ENST00000580569 HIGD1BQ9P298 99 aa5.6□□□□□ -1.51
RFFL-207ENST00000580569 TRAV4A0A0B4J268 109 aa5.59□□□□□ -1.51
RFFL-207ENST00000580569 C9orf66Q5T8R8 295 aa5.59□□□□□ -1.51
RFFL-207ENST00000580569 Q6ZTI0 123 aa5.59□□□□□ -1.51
RFFL-207ENST00000580569 GTSCR1Q86UQ5 136 aa5.59□□□□□ -1.51
RFFL-207ENST00000580569 MAPKAPK5-AS1Q8N8E1 139 aa5.59□□□□□ -1.51
RFFL-207ENST00000580569 C16orf74Q96GX8 76 aa5.59□□□□□ -1.51
RFFL-207ENST00000580569 CHCHD7Q9BUK0 85 aa5.59□□□□□ -1.51
RFFL-207ENST00000580569 C1QTNF4Q9BXJ3 329 aa5.59□□□□□ -1.51
RFFL-207ENST00000580569 PYGO1Q9Y3Y4 419 aa5.59□□□□□ -1.51
RFFL-207ENST00000580569 IGLV4-3A0A075B6K6 122 aa5.58□□□□□ -1.52
RFFL-207ENST00000580569 IGHV3OR16-12A0A075B7B8 117 aa5.58□□□□□ -1.52
RFFL-207ENST00000580569 C11orf86A6NJI1 115 aa5.58□□□□□ -1.52
RFFL-207ENST00000580569 E9PLD3 99 aa5.58□□□□□ -1.52
RFFL-207ENST00000580569 TCTAP57738 103 aa5.58□□□□□ -1.52
RFFL-207ENST00000580569 BATFQ16520 125 aa5.58□□□□□ -1.52
RFFL-207ENST00000580569 NFE4Q86UQ8 179 aa5.58□□□□□ -1.52
RFFL-207ENST00000580569 LINC00612Q8N6U2 182 aa5.58□□□□□ -1.52
RFFL-207ENST00000580569 ZNF479Q96JC4 524 aa5.58□□□□□ -1.52
RFFL-207ENST00000580569 AMELXQ99217 191 aa5.58□□□□□ -1.52
RFFL-207ENST00000580569 TMEM208Q9BTX3 173 aa5.58□□□□□ -1.52
RFFL-207ENST00000580569 TTTY13Q9BZ97 58 aa5.58□□□□□ -1.52
RFFL-207ENST00000580569 ALMS1Q8TCU4 4167 aa5.58□□□□□ -1.52
RFFL-207ENST00000580569 HECTD4Q9Y4D8 3996 aa5.57□□□□□ -1.52
RFFL-207ENST00000580569 TRGV1A0A0A0MS02 117 aa5.57□□□□□ -1.52
RFFL-207ENST00000580569 TRBV10-1A0A0K0K1A3 114 aa5.57□□□□□ -1.52
RFFL-207ENST00000580569 NMUP48645 174 aa5.57□□□□□ -1.52
RFFL-207ENST00000580569 CRYBA4P53673 196 aa5.57□□□□□ -1.52
RFFL-207ENST00000580569 TMEM97Q5BJF2 176 aa5.57□□□□□ -1.52
RFFL-207ENST00000580569 OR4C5Q8NGB2 326 aa5.57□□□□□ -1.52
RFFL-207ENST00000580569 ZNRF2Q8NHG8 242 aa5.57□□□□□ -1.52
RFFL-207ENST00000580569 OPRPNQ99935 248 aaPredicted RBP5.57□□□□□ -1.52
RFFL-207ENST00000580569 TM2D2Q9BX73 214 aa5.57□□□□□ -1.52
RFFL-207ENST00000580569 TNFRSF18Q9Y5U5 241 aa5.57□□□□□ -1.52
RFFL-207ENST00000580569 KMT2AQ03164 3969 aa5.57□□□□□ -1.52
RFFL-207ENST00000580569 TRBV25-1A0A075B6N4 114 aa5.56□□□□□ -1.52
RFFL-207ENST00000580569 TAX1BP3O14907 124 aa5.56□□□□□ -1.52
RFFL-207ENST00000580569 CIDEAO60543 219 aa5.56□□□□□ -1.52
RFFL-207ENST00000580569 HSD52Q0P140 79 aa5.56□□□□□ -1.52
RFFL-207ENST00000580569 PAPPA-AS1Q5QFB9 102 aa5.56□□□□□ -1.52
RFFL-207ENST00000580569 SBSPONQ8IVN8 264 aa5.56□□□□□ -1.52
RFFL-207ENST00000580569 RNF183Q96D59 192 aa5.56□□□□□ -1.52
RFFL-207ENST00000580569 NOP10Q9NPE3 64 aaKnown RBP5.56□□□□□ -1.52
RFFL-207ENST00000580569 UBE2D4Q9Y2X8 147 aa5.56□□□□□ -1.52
RFFL-207ENST00000580569 TRBV7-3A0A075B6L6 115 aa5.55□□□□□ -1.52
RFFL-207ENST00000580569 K7EQD1 137 aa5.55□□□□□ -1.52
RFFL-207ENST00000580569 LINC00694P0DN24 101 aa5.55□□□□□ -1.52
RFFL-207ENST00000580569 UBE2D3P61077 147 aa5.55□□□□□ -1.52
RFFL-207ENST00000580569 UBE2D2P62837 147 aa5.55□□□□□ -1.52
RFFL-207ENST00000580569 GAGE1Q13065 139 aa5.55□□□□□ -1.52
RFFL-207ENST00000580569 RRN3P1Q2M238 152 aa5.55□□□□□ -1.52
RFFL-207ENST00000580569 NTM-AS1Q6ZSK4 140 aa5.55□□□□□ -1.52
RFFL-207ENST00000580569 Q6ZVH6 145 aa5.55□□□□□ -1.52
RFFL-207ENST00000580569 LINC00469Q8N7U9 141 aa5.55□□□□□ -1.52
RFFL-207ENST00000580569 KIR2DL5BQ8NHK3 375 aa5.55□□□□□ -1.52
RFFL-207ENST00000580569 TIMM21Q9BVV7 248 aa5.55□□□□□ -1.52
RFFL-207ENST00000580569 COX11Q9Y6N1 276 aa5.55□□□□□ -1.52
RFFL-207ENST00000580569 IGHV3-38A0A0C4DH36 116 aa5.54□□□□□ -1.52
RFFL-207ENST00000580569 ZNF25P17030 456 aaPredicted RBP5.54□□□□□ -1.52
RFFL-207ENST00000580569 SEC11AP67812 179 aa5.54□□□□□ -1.52
RFFL-207ENST00000580569 MRPS36P82909 103 aaKnown RBP5.54□□□□□ -1.52
RFFL-207ENST00000580569 FHL2Q14192 279 aa5.54□□□□□ -1.52
RFFL-207ENST00000580569 SLC25A29Q8N8R3 303 aa5.54□□□□□ -1.52
RFFL-207ENST00000580569 ORAOV1Q8WV07 137 aa5.54□□□□□ -1.52
RFFL-207ENST00000580569 PHLDA1Q8WV24 401 aaPredicted RBP5.54□□□□□ -1.52
RFFL-207ENST00000580569 PRADC1Q9BSG0 188 aa5.54□□□□□ -1.52
RFFL-207ENST00000580569 SPANXA1Q9NS26 97 aa5.54□□□□□ -1.52
RFFL-207ENST00000580569 MYMXA0A1B0GTQ4 84 aa5.53□□□□□ -1.52
RFFL-207ENST00000580569 TRBV6-4A0A1B0GX49 114 aa5.53□□□□□ -1.52
RFFL-207ENST00000580569 TMEM223A0PJW6 202 aa5.53□□□□□ -1.52
RFFL-207ENST00000580569 SMIM9A6NGZ8 99 aa5.53□□□□□ -1.52
RFFL-207ENST00000580569 GAGE7O76087 117 aa5.53□□□□□ -1.52
RFFL-207ENST00000580569 GAGE12FP0CL80 117 aa5.53□□□□□ -1.52
RFFL-207ENST00000580569 GAGE12GP0CL81 117 aa5.53□□□□□ -1.52
RFFL-207ENST00000580569 GAGE12IP0CL82 117 aa5.53□□□□□ -1.52
RFFL-207ENST00000580569 VPREB1P12018 145 aa5.53□□□□□ -1.52
RFFL-207ENST00000580569 ZNF22P17026 224 aaPredicted RBP5.53□□□□□ -1.52
RFFL-207ENST00000580569 EMP1P54849 157 aa5.53□□□□□ -1.52
RFFL-207ENST00000580569 TSPEAR-AS2P59090 65 aa5.53□□□□□ -1.52
RFFL-207ENST00000580569 COTL1Q14019 142 aa5.53□□□□□ -1.52
RFFL-207ENST00000580569 TAL2Q16559 108 aa5.53□□□□□ -1.52
RFFL-207ENST00000580569 CEMP1Q6PRD7 247 aaPredicted RBP5.53□□□□□ -1.52
RFFL-207ENST00000580569 OR11H2Q8NH07 326 aa5.53□□□□□ -1.52
RFFL-207ENST00000580569 CHAC1Q9BUX1 264 aa5.53□□□□□ -1.52
RFFL-207ENST00000580569 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.52□□□□□ -1.53
RFFL-207ENST00000580569 TRAV8-6A0A0B4J262 113 aa5.52□□□□□ -1.53
RFFL-207ENST00000580569 A0A0J9YXV3 536 aa5.52□□□□□ -1.53
RFFL-207ENST00000580569 IGKV2-29A2NJV5 120 aaPredicted RBP5.52□□□□□ -1.53
RFFL-207ENST00000580569 H3BRM9 83 aa5.52□□□□□ -1.53
RFFL-207ENST00000580569 FXYD2P54710 66 aa5.52□□□□□ -1.53
RFFL-207ENST00000580569 RPL36AP83881 106 aaKnown RBP5.52□□□□□ -1.53
RFFL-207ENST00000580569 ZFAND6Q6FIF0 208 aa5.52□□□□□ -1.53
RFFL-207ENST00000580569 FAM19A3Q7Z5A8 133 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms