RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 CHAC1Q9BUX1 264 aa10.37□□□□□ -0.75
CDK5RAP3-218ENST00000580391 TRBV25-1A0A075B6N4 114 aa10.36□□□□□ -0.75
CDK5RAP3-218ENST00000580391 NPSP0C0P6 89 aa10.36□□□□□ -0.75
CDK5RAP3-218ENST00000580391 TIMM21Q9BVV7 248 aa10.36□□□□□ -0.75
CDK5RAP3-218ENST00000580391 SNHG12Q9BXW3 62 aa10.36□□□□□ -0.75
CDK5RAP3-218ENST00000580391 A0A096LPF7 62 aa10.35□□□□□ -0.75
CDK5RAP3-218ENST00000580391 A0A0J9YXV3 536 aa10.35□□□□□ -0.75
CDK5RAP3-218ENST00000580391 F5H768 121 aa10.35□□□□□ -0.75
CDK5RAP3-218ENST00000580391 KPRPQ5T749 579 aaPredicted RBP10.35□□□□□ -0.75
CDK5RAP3-218ENST00000580391 BOD1L2Q8IYS8 172 aa10.35□□□□□ -0.75
CDK5RAP3-218ENST00000580391 ATP6V0E2Q8NHE4 81 aa10.35□□□□□ -0.75
CDK5RAP3-218ENST00000580391 TRAV26-1A0A087WT03 109 aa10.35□□□□□ -0.75
CDK5RAP3-218ENST00000580391 TRBV6-8A0A0A6YYG3 113 aa10.35□□□□□ -0.75
CDK5RAP3-218ENST00000580391 TEX48A0A1B0GUV7 120 aa10.35□□□□□ -0.75
CDK5RAP3-218ENST00000580391 C12orf74Q32Q52 190 aa10.35□□□□□ -0.75
CDK5RAP3-218ENST00000580391 DGAT2L7PQ6IED9 249 aa10.35□□□□□ -0.75
CDK5RAP3-218ENST00000580391 C2orf91Q6ZV80 131 aa10.35□□□□□ -0.75
CDK5RAP3-218ENST00000580391 MRPL52Q86TS9 123 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP3-218ENST00000580391 NFE4Q86UQ8 179 aa10.35□□□□□ -0.75
CDK5RAP3-218ENST00000580391 C11orf68Q9H3H3 251 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP3-218ENST00000580391 UBE2L6O14933 153 aa10.34□□□□□ -0.75
CDK5RAP3-218ENST00000580391 MRPS36P82909 103 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-218ENST00000580391 LBHQ53QV2 105 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-218ENST00000580391 SVIPQ8NHG7 77 aa10.34□□□□□ -0.75
CDK5RAP3-218ENST00000580391 MRPS16Q9Y3D3 137 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-218ENST00000580391 TMEM170BQ5T4T1 132 aa10.34□□□□□ -0.75
CDK5RAP3-218ENST00000580391 A0A0J9YWU9 116 aa10.33□□□□□ -0.76
CDK5RAP3-218ENST00000580391 ZNF22P17026 224 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-218ENST00000580391 GAGE6Q13070 117 aa10.33□□□□□ -0.76
CDK5RAP3-218ENST00000580391 TRAV8-6A0A0B4J262 113 aa10.32□□□□□ -0.76
CDK5RAP3-218ENST00000580391 E9PLD3 99 aa10.32□□□□□ -0.76
CDK5RAP3-218ENST00000580391 M0R143 59 aa10.32□□□□□ -0.76
CDK5RAP3-218ENST00000580391 C21orf62-AS1Q17RA5 79 aa10.32□□□□□ -0.76
CDK5RAP3-218ENST00000580391 AMMECR1LQ6DCA0 310 aa10.32□□□□□ -0.76
CDK5RAP3-218ENST00000580391 C2orf88Q9BSF0 95 aa10.32□□□□□ -0.76
CDK5RAP3-218ENST00000580391 DLEU1O43261 78 aa10.32□□□□□ -0.76
CDK5RAP3-218ENST00000580391 MRAPQ8TCY5 172 aa10.32□□□□□ -0.76
CDK5RAP3-218ENST00000580391 CHCHD5Q9BSY4 110 aa10.32□□□□□ -0.76
CDK5RAP3-218ENST00000580391 CSDC2Q9Y534 153 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-218ENST00000580391 UBE2D1P51668 147 aa10.31□□□□□ -0.76
CDK5RAP3-218ENST00000580391 BATFQ16520 125 aa10.31□□□□□ -0.76
CDK5RAP3-218ENST00000580391 TMEM97Q5BJF2 176 aa10.31□□□□□ -0.76
CDK5RAP3-218ENST00000580391 DEFB121Q5J5C9 76 aa10.31□□□□□ -0.76
CDK5RAP3-218ENST00000580391 OR5A1Q8NGJ0 315 aa10.31□□□□□ -0.76
CDK5RAP3-218ENST00000580391 PCP4P48539 62 aa10.3□□□□□ -0.76
CDK5RAP3-218ENST00000580391 Q6ZTC4 211 aa10.3□□□□□ -0.76
CDK5RAP3-218ENST00000580391 MAPKAPK5-AS1Q8N8E1 139 aa10.3□□□□□ -0.76
CDK5RAP3-218ENST00000580391 CDC42SE2Q9NRR3 84 aa10.3□□□□□ -0.76
CDK5RAP3-218ENST00000580391 A0A1B0GV90 55 aa10.3□□□□□ -0.76
CDK5RAP3-218ENST00000580391 H7C423 109 aa10.3□□□□□ -0.76
CDK5RAP3-218ENST00000580391 HERVK_113P61574 105 aa10.3□□□□□ -0.76
CDK5RAP3-218ENST00000580391 SPATA25Q9BR10 227 aa10.3□□□□□ -0.76
CDK5RAP3-218ENST00000580391 DNHD1Q96M86 4753 aa10.29□□□□□ -0.76
CDK5RAP3-218ENST00000580391 DNAH9Q9NYC9 4486 aa10.29□□□□□ -0.76
CDK5RAP3-218ENST00000580391 HINT1P49773 126 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-218ENST00000580391 SMAGPQ0VAQ4 97 aa10.29□□□□□ -0.76
CDK5RAP3-218ENST00000580391 TMEM101Q96IK0 257 aa10.29□□□□□ -0.76
CDK5RAP3-218ENST00000580391 TM2D3Q9BRN9 247 aa10.29□□□□□ -0.76
CDK5RAP3-218ENST00000580391 IGLV4-60A0A075B6I1 120 aa10.28□□□□□ -0.76
CDK5RAP3-218ENST00000580391 TINCRA0A1B0GVN0 87 aa10.28□□□□□ -0.76
CDK5RAP3-218ENST00000580391 TMEM223A0PJW6 202 aa10.28□□□□□ -0.76
CDK5RAP3-218ENST00000580391 TSPEAR-AS2P59090 65 aa10.28□□□□□ -0.76
CDK5RAP3-218ENST00000580391 ZNF25P17030 456 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP3-218ENST00000580391 MPV17L2Q567V2 206 aa10.28□□□□□ -0.76
CDK5RAP3-218ENST00000580391 IGHV3-64A0A075B6Q5 118 aa10.27□□□□□ -0.77
CDK5RAP3-218ENST00000580391 NANOS2P60321 138 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP3-218ENST00000580391 ICOSQ9Y6W8 199 aa10.27□□□□□ -0.77
CDK5RAP3-218ENST00000580391 TRAV13-1A0A0B4J241 112 aa10.26□□□□□ -0.77
CDK5RAP3-218ENST00000580391 MRPL23Q16540 153 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-218ENST00000580391 SIVA1O15304 175 aa10.26□□□□□ -0.77
CDK5RAP3-218ENST00000580391 KRTAP21-3Q3LHN1 58 aa10.26□□□□□ -0.77
CDK5RAP3-218ENST00000580391 COX6A2Q02221 97 aa10.25□□□□□ -0.77
CDK5RAP3-218ENST00000580391 LINC00242Q5T6M2 205 aa10.25□□□□□ -0.77
CDK5RAP3-218ENST00000580391 C11orf45Q8TAV5 145 aa10.25□□□□□ -0.77
CDK5RAP3-218ENST00000580391 GEMIN7Q9H840 131 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-218ENST00000580391 MYMXA0A1B0GTQ4 84 aa10.25□□□□□ -0.77
CDK5RAP3-218ENST00000580391 ZNF815PA8K554 130 aa10.25□□□□□ -0.77
CDK5RAP3-218ENST00000580391 CDKN2A-AS1Q9UH64 79 aa10.25□□□□□ -0.77
CDK5RAP3-218ENST00000580391 TRAV8-3A0A0A6YYJ7 113 aa10.24□□□□□ -0.77
CDK5RAP3-218ENST00000580391 BVES-AS1Q5T3Y7 98 aa10.24□□□□□ -0.77
CDK5RAP3-218ENST00000580391 IGLV5-45A0A087WSX0 123 aa10.23□□□□□ -0.77
CDK5RAP3-218ENST00000580391 IGKV3OR2-268A0A0C4DH90 116 aa10.23□□□□□ -0.77
CDK5RAP3-218ENST00000580391 TMEM262E9PQX1 116 aa10.23□□□□□ -0.77
CDK5RAP3-218ENST00000580391 J3QQQ9 107 aa10.23□□□□□ -0.77
CDK5RAP3-218ENST00000580391 LEPROTO15243 131 aa10.23□□□□□ -0.77
CDK5RAP3-218ENST00000580391 SPINK8P0C7L1 97 aa10.23□□□□□ -0.77
CDK5RAP3-218ENST00000580391 TIRAPP58753 221 aa10.23□□□□□ -0.77
CDK5RAP3-218ENST00000580391 FAM19A3Q7Z5A8 133 aa10.23□□□□□ -0.77
CDK5RAP3-218ENST00000580391 HIGD1BQ9P298 99 aa10.23□□□□□ -0.77
CDK5RAP3-218ENST00000580391 RBX1P62877 108 aa10.23□□□□□ -0.77
CDK5RAP3-218ENST00000580391 PLEKHB2Q96CS7 222 aa10.23□□□□□ -0.77
CDK5RAP3-218ENST00000580391 HERVK_113P63121 156 aa10.22□□□□□ -0.77
CDK5RAP3-218ENST00000580391 HSD52Q0P140 79 aa10.22□□□□□ -0.77
CDK5RAP3-218ENST00000580391 Q8N3U1 123 aa10.22□□□□□ -0.77
CDK5RAP3-218ENST00000580391 COL7A1Q02388 2944 aa10.22□□□□□ -0.77
CDK5RAP3-218ENST00000580391 IGHV3-30-3P0DP02 117 aa10.21□□□□□ -0.77
CDK5RAP3-218ENST00000580391 LGALS3P17931 250 aaKnown RBP10.21□□□□□ -0.77
CDK5RAP3-218ENST00000580391 SH2D6Q7Z4S9 175 aa10.21□□□□□ -0.77
CDK5RAP3-218ENST00000580391 DEFB131BA0A096LNP1 70 aa10.21□□□□□ -0.78
CDK5RAP3-218ENST00000580391 IGHV1-58A0A0C4DH39 117 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms