RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 ODF1Q14990 250 aa6.06□□□□□ -1.44
SMARCD2-208ENST00000580054 FA2HQ7L5A8 372 aa6.06□□□□□ -1.44
SMARCD2-208ENST00000580054 DAZ4Q86SG3 579 aaKnown RBP6.06□□□□□ -1.44
SMARCD2-208ENST00000580054 BAGE3Q86Y29 109 aa6.06□□□□□ -1.44
SMARCD2-208ENST00000580054 ATP6V0E2Q8NHE4 81 aa6.06□□□□□ -1.44
SMARCD2-208ENST00000580054 GTSF1LQ9H1H1 148 aa6.06□□□□□ -1.44
SMARCD2-208ENST00000580054 DAZ3Q9NR90 486 aaKnown RBP6.06□□□□□ -1.44
SMARCD2-208ENST00000580054 SMKR1H3BMG3 65 aa6.05□□□□□ -1.44
SMARCD2-208ENST00000580054 RPL32P62910 135 aaKnown RBP6.05□□□□□ -1.44
SMARCD2-208ENST00000580054 BAALCQ8WXS3 180 aa6.05□□□□□ -1.44
SMARCD2-208ENST00000580054 TRAV8-3A0A0A6YYJ7 113 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 LOC389332A0A1B0GUA5 103 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 GAGE12JA6NER3 117 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 SDHAF1A6NFY7 115 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 LINC01549A6NIU2 74 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 PRSS47A8MTI9 375 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 I3L3M4 83 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 NPYP01303 97 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 FCER1GP30273 86 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 SMAGPQ0VAQ4 97 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 Q0VG73 95 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 GAGE1Q13065 139 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 GAGE4Q13068 117 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 GAGE5Q13069 117 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 COTL1Q14019 142 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 GAGE13Q4V321 117 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 Q8N8P6 123 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 NRACQ8N912 160 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 NEXN-AS1Q8NBZ9 246 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 TMEM18Q96B42 140 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 RPL39LQ96EH5 51 aaKnown RBP6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 KRTAP9-2Q9BYQ4 174 aa6.04□□□□□ -1.44
SMARCD2-208ENST00000580054 GAS8-AS1O95177 125 aa6.03□□□□□ -1.44
SMARCD2-208ENST00000580054 LINC00614P0C842 121 aa6.03□□□□□ -1.44
SMARCD2-208ENST00000580054 ORMDL2Q53FV1 153 aa6.03□□□□□ -1.44
SMARCD2-208ENST00000580054 C18orf32Q8TCD1 76 aa6.03□□□□□ -1.44
SMARCD2-208ENST00000580054 CHCHD1Q96BP2 118 aaKnown RBP6.03□□□□□ -1.44
SMARCD2-208ENST00000580054 SMIM2Q9BVW6 85 aa6.03□□□□□ -1.44
SMARCD2-208ENST00000580054 TRBV27A0A0K0K1C4 114 aa6.02□□□□□ -1.45
SMARCD2-208ENST00000580054 HIST1H2BKO60814 126 aa6.02□□□□□ -1.45
SMARCD2-208ENST00000580054 HSBP1O75506 76 aa6.02□□□□□ -1.45
SMARCD2-208ENST00000580054 HIST1H2BJP06899 126 aa6.02□□□□□ -1.45
SMARCD2-208ENST00000580054 HIST1H2BOP23527 126 aa6.02□□□□□ -1.45
SMARCD2-208ENST00000580054 HIST1H2BBP33778 126 aa6.02□□□□□ -1.45
SMARCD2-208ENST00000580054 POLR2KP53803 58 aaKnown RBP6.02□□□□□ -1.45
SMARCD2-208ENST00000580054 NDUFA6P56556 154 aa6.02□□□□□ -1.45
SMARCD2-208ENST00000580054 HIST1H2BDP58876 126 aa6.02□□□□□ -1.45
SMARCD2-208ENST00000580054 UBE2D3P61077 147 aa6.02□□□□□ -1.45
SMARCD2-208ENST00000580054 HIST1H2BCP62807 126 aa6.02□□□□□ -1.45
SMARCD2-208ENST00000580054 UBE2D2P62837 147 aa6.02□□□□□ -1.45
SMARCD2-208ENST00000580054 HIST2H2BEQ16778 126 aa6.02□□□□□ -1.45
SMARCD2-208ENST00000580054 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.02□□□□□ -1.45
SMARCD2-208ENST00000580054 HIST1H2BHQ93079 126 aa6.02□□□□□ -1.45
SMARCD2-208ENST00000580054 HIST1H2BNQ99877 126 aa6.02□□□□□ -1.45
SMARCD2-208ENST00000580054 HIST1H2BMQ99879 126 aa6.02□□□□□ -1.45
SMARCD2-208ENST00000580054 AP5S1Q9NUS5 200 aa6.02□□□□□ -1.45
SMARCD2-208ENST00000580054 TRBV25-1A0A075B6N4 114 aa6.01□□□□□ -1.45
SMARCD2-208ENST00000580054 IGKV2D-24A0A075B6R9 120 aa6.01□□□□□ -1.45
SMARCD2-208ENST00000580054 LINC00694P0DN24 101 aa6.01□□□□□ -1.45
SMARCD2-208ENST00000580054 IFI27P40305 119 aaPredicted RBP6.01□□□□□ -1.45
SMARCD2-208ENST00000580054 PKIAP61925 76 aa6.01□□□□□ -1.45
SMARCD2-208ENST00000580054 RNASEKQ6P5S7 137 aaKnown RBP6.01□□□□□ -1.45
SMARCD2-208ENST00000580054 NIT1Q86X76 327 aa6.01□□□□□ -1.45
SMARCD2-208ENST00000580054 RMI2Q96E14 147 aa6.01□□□□□ -1.45
SMARCD2-208ENST00000580054 COX11Q9Y6N1 276 aa6.01□□□□□ -1.45
SMARCD2-208ENST00000580054 IGHV1-24A0A0C4DH33 117 aa6□□□□□ -1.45
SMARCD2-208ENST00000580054 UBE2L6O14933 153 aa6□□□□□ -1.45
SMARCD2-208ENST00000580054 AMTP48728 403 aa6□□□□□ -1.45
SMARCD2-208ENST00000580054 IQCJQ1A5X6 159 aa6□□□□□ -1.45
SMARCD2-208ENST00000580054 Q8N976 141 aa6□□□□□ -1.45
SMARCD2-208ENST00000580054 LPAP08519 4548 aa5.99□□□□□ -1.45
SMARCD2-208ENST00000580054 S100A2P29034 98 aa5.99□□□□□ -1.45
SMARCD2-208ENST00000580054 Q6ZRU5 148 aa5.99□□□□□ -1.45
SMARCD2-208ENST00000580054 Q9UF83 564 aa5.99□□□□□ -1.45
SMARCD2-208ENST00000580054 H7C423 109 aa5.98□□□□□ -1.45
SMARCD2-208ENST00000580054 SERF1AO75920 110 aa5.98□□□□□ -1.45
SMARCD2-208ENST00000580054 COA6Q5JTJ3 125 aaKnown RBP5.98□□□□□ -1.45
SMARCD2-208ENST00000580054 UBE2WQ96B02 151 aa5.98□□□□□ -1.45
SMARCD2-208ENST00000580054 TMEM243Q9BU79 118 aa5.98□□□□□ -1.45
SMARCD2-208ENST00000580054 KLK12Q9UKR0 248 aa5.98□□□□□ -1.45
SMARCD2-208ENST00000580054 CYSLTR1Q9Y271 337 aa5.98□□□□□ -1.45
SMARCD2-208ENST00000580054 TMA7Q9Y2S6 64 aaKnown RBP5.98□□□□□ -1.45
SMARCD2-208ENST00000580054 TRBV6-8A0A0A6YYG3 113 aa5.97□□□□□ -1.45
SMARCD2-208ENST00000580054 LINC01546A6NGU7 62 aa5.97□□□□□ -1.45
SMARCD2-208ENST00000580054 TSHBP01222 138 aa5.97□□□□□ -1.45
SMARCD2-208ENST00000580054 HBDP02042 147 aa5.97□□□□□ -1.45
SMARCD2-208ENST00000580054 PAPPA-AS1Q5QFB9 102 aa5.97□□□□□ -1.45
SMARCD2-208ENST00000580054 AMMECR1LQ6DCA0 310 aa5.97□□□□□ -1.45
SMARCD2-208ENST00000580054 DGAT2L7PQ6IED9 249 aa5.97□□□□□ -1.45
SMARCD2-208ENST00000580054 TMEM101Q96IK0 257 aa5.97□□□□□ -1.45
SMARCD2-208ENST00000580054 CHCHD5Q9BSY4 110 aa5.97□□□□□ -1.45
SMARCD2-208ENST00000580054 HSPB8Q9UJY1 196 aa5.97□□□□□ -1.45
SMARCD2-208ENST00000580054 FAT4Q6V0I7 4981 aa5.97□□□□□ -1.45
SMARCD2-208ENST00000580054 A0A087WX48 190 aa5.96□□□□□ -1.46
SMARCD2-208ENST00000580054 KRTAP9-6A0A140TA67 174 aa5.96□□□□□ -1.46
SMARCD2-208ENST00000580054 TMEM262E9PQX1 116 aa5.96□□□□□ -1.46
SMARCD2-208ENST00000580054 PANO1I0J062 215 aa5.96□□□□□ -1.46
SMARCD2-208ENST00000580054 ATP5LO75964 103 aa5.96□□□□□ -1.46
SMARCD2-208ENST00000580054 ESDP10768 282 aa5.96□□□□□ -1.46
SMARCD2-208ENST00000580054 C2orf66Q6UXQ4 117 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms