RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 RPS10P5Q9NQ39 176 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 PRR34Q9NV39 138 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 URGCP-MRPS24S4R325 110 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 HERC2O95714 4834 aa2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 IGLV4-60A0A075B6I1 120 aa2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 A0A096LNJ9 63 aa2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 A0A1B0GUV1 79 aa2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 LRCOL1A6NCL2 159 aa2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 K7EP13 123 aa2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 M0R2N4 97 aa2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 SCO1O75880 301 aa2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 HLA-DQA1P01909 254 aa2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 PPBPP02775 128 aa2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 S100A8P05109 93 aa2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 BTF3P20290 206 aaKnown RBP2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 RBX1P62877 108 aa2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 WFDC2Q14508 124 aa2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 LAGE3Q14657 143 aa2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 KCNIP4Q6PIL6 250 aa2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 ENHOQ6UWT2 76 aa2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 MRPL52Q86TS9 123 aaKnown RBP2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 ORMDL3Q8N138 153 aa2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 Q8N976 141 aa2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 PRELID3AQ96N28 172 aa2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 ST20Q9HBF5 79 aa2.51□□□□□ -2.01
SMARCE1-215ENST00000578995 TRBV25-1A0A075B6N4 114 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 TRAV8-6A0A0B4J262 113 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 IGHV1-24A0A0C4DH33 117 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 IGKV2-29A2NJV5 120 aaPredicted RBP2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 I3L3M4 83 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 VCYO14598 125 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 ATP6V1G1O75348 118 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 IGHV3-30P01768 117 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 IGHV3-33P01772 117 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 MT-ND6P03923 174 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 IGHV3-30-3P0DP02 117 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 IGHV3-30-5P0DP03 117 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 CKS2P33552 79 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 COTL1Q14019 142 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 KIAA1644Q3SXP7 199 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 COX19Q49B96 90 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 TMEM97Q5BJF2 176 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 TTC32Q5I0X7 151 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 LINC00173Q6ZV60 143 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 SMIM15Q7Z3B0 74 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 C6orf223Q8N319 242 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 Q8N8P6 123 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 C18orf32Q8TCD1 76 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 TMEM243Q9BU79 118 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 TIMM21Q9BVV7 248 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 LAMTOR2Q9Y2Q5 125 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 UBE2D4Q9Y2X8 147 aa2.5□□□□□ -2.01
SMARCE1-215ENST00000578995 FAT1Q14517 4588 aa2.49□□□□□ -2.01
SMARCE1-215ENST00000578995 IGIPA6NJ69 53 aa2.49□□□□□ -2.01
SMARCE1-215ENST00000578995 H7C423 109 aa2.49□□□□□ -2.01
SMARCE1-215ENST00000578995 TCAPO15273 167 aa2.49□□□□□ -2.01
SMARCE1-215ENST00000578995 PPP1R17O96001 155 aa2.49□□□□□ -2.01
SMARCE1-215ENST00000578995 APCSP02743 223 aa2.49□□□□□ -2.01
SMARCE1-215ENST00000578995 FGF6P10767 208 aa2.49□□□□□ -2.01
SMARCE1-215ENST00000578995 S100PP25815 95 aa2.49□□□□□ -2.01
SMARCE1-215ENST00000578995 IFI27P40305 119 aaPredicted RBP2.49□□□□□ -2.01
SMARCE1-215ENST00000578995 AMTP48728 403 aa2.49□□□□□ -2.01
SMARCE1-215ENST00000578995 RPL39P62891 51 aaKnown RBP2.49□□□□□ -2.01
SMARCE1-215ENST00000578995 GAGE6Q13070 117 aa2.49□□□□□ -2.01
SMARCE1-215ENST00000578995 C1orf134Q5TEV5 83 aa2.49□□□□□ -2.01
SMARCE1-215ENST00000578995 Q6ZUT4 128 aa2.49□□□□□ -2.01
SMARCE1-215ENST00000578995 SMCO4Q9NRQ5 59 aa2.49□□□□□ -2.01
SMARCE1-215ENST00000578995 CDC42SE2Q9NRR3 84 aa2.49□□□□□ -2.01
SMARCE1-215ENST00000578995 KLK12Q9UKR0 248 aa2.49□□□□□ -2.01
SMARCE1-215ENST00000578995 CSDC2Q9Y534 153 aaKnown RBP2.49□□□□□ -2.01
SMARCE1-215ENST00000578995 A0A087WTM6 91 aa2.48□□□□□ -2.01
SMARCE1-215ENST00000578995 K7EMI3 77 aa2.48□□□□□ -2.01
SMARCE1-215ENST00000578995 ZNF25P17030 456 aaPredicted RBP2.48□□□□□ -2.01
SMARCE1-215ENST00000578995 RAB5AP20339 215 aa2.48□□□□□ -2.01
SMARCE1-215ENST00000578995 PMCHP20382 165 aa2.48□□□□□ -2.01
SMARCE1-215ENST00000578995 MRPS36P82909 103 aaKnown RBP2.48□□□□□ -2.01
SMARCE1-215ENST00000578995 REG3AQ06141 175 aa2.48□□□□□ -2.01
SMARCE1-215ENST00000578995 FABP9Q0Z7S8 132 aa2.48□□□□□ -2.01
SMARCE1-215ENST00000578995 LINC00336Q6ZUF6 198 aa2.48□□□□□ -2.01
SMARCE1-215ENST00000578995 LINC00269Q8N2A0 174 aa2.48□□□□□ -2.01
SMARCE1-215ENST00000578995 C10orf126Q8N4M7 172 aa2.48□□□□□ -2.01
SMARCE1-215ENST00000578995 OPRPNQ99935 248 aaPredicted RBP2.48□□□□□ -2.01
SMARCE1-215ENST00000578995 CHCHD5Q9BSY4 110 aa2.48□□□□□ -2.01
SMARCE1-215ENST00000578995 MAP1LC3AQ9H492 121 aa2.48□□□□□ -2.01
SMARCE1-215ENST00000578995 PYGO1Q9Y3Y4 419 aa2.48□□□□□ -2.01
SMARCE1-215ENST00000578995 TRAPPC1Q9Y5R8 145 aa2.48□□□□□ -2.01
SMARCE1-215ENST00000578995 PKHD1L1Q86WI1 4243 aa2.48□□□□□ -2.01
SMARCE1-215ENST00000578995 IGLV4-3A0A075B6K6 122 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 A0A087WX48 190 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 LOC389332A0A1B0GUA5 103 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 LINC00959A0A1B0GUT2 108 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 PRSS29PA6NIE9 313 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 NUPR1O60356 82 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 ANGP03950 147 aaKnown RBP2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 TRGC2P03986 189 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 MT3P25713 68 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 PKIAP61925 76 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 MIAQ16674 131 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 PDZD11Q5EBL8 140 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms