RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 AMMECR1LQ6DCA0 310 aa4.54□□□□□ -1.68
SLC46A1-201ENST00000578217 RASL11AQ6T310 242 aa4.54□□□□□ -1.68
SLC46A1-201ENST00000578217 AP1S3Q96PC3 154 aa4.54□□□□□ -1.68
SLC46A1-201ENST00000578217 MED28Q9H204 178 aa4.54□□□□□ -1.68
SLC46A1-201ENST00000578217 ZFP30Q9Y2G7 519 aa4.54□□□□□ -1.68
SLC46A1-201ENST00000578217 FAM74A7A6NL05 159 aa4.53□□□□□ -1.68
SLC46A1-201ENST00000578217 M0QXV9 152 aa4.53□□□□□ -1.68
SLC46A1-201ENST00000578217 SMIM17P0DL12 118 aa4.53□□□□□ -1.68
SLC46A1-201ENST00000578217 H2BFSP57053 126 aa4.53□□□□□ -1.68
SLC46A1-201ENST00000578217 EIF5AL1Q6IS14 154 aaKnown RBP4.53□□□□□ -1.68
SLC46A1-201ENST00000578217 CD164L2Q6UWJ8 174 aa4.53□□□□□ -1.68
SLC46A1-201ENST00000578217 NIT2Q9NQR4 276 aa4.53□□□□□ -1.68
SLC46A1-201ENST00000578217 TMEM167BQ9NRX6 74 aa4.53□□□□□ -1.68
SLC46A1-201ENST00000578217 LYRM1O43325 122 aa4.52□□□□□ -1.69
SLC46A1-201ENST00000578217 CXorf1O96002 111 aa4.52□□□□□ -1.69
SLC46A1-201ENST00000578217 TSHBP01222 138 aa4.52□□□□□ -1.69
SLC46A1-201ENST00000578217 CXCL1P09341 107 aa4.52□□□□□ -1.69
SLC46A1-201ENST00000578217 CFC1BP0CG36 223 aa4.52□□□□□ -1.69
SLC46A1-201ENST00000578217 UBE2BP63146 152 aa4.52□□□□□ -1.69
SLC46A1-201ENST00000578217 SS18Q15532 418 aa4.52□□□□□ -1.69
SLC46A1-201ENST00000578217 LINC00304Q8N9R0 145 aa4.52□□□□□ -1.69
SLC46A1-201ENST00000578217 PPP1R1CQ8WVI7 109 aa4.52□□□□□ -1.69
SLC46A1-201ENST00000578217 ISOC2Q96AB3 205 aa4.52□□□□□ -1.69
SLC46A1-201ENST00000578217 CENPXA8MT69 81 aa4.51□□□□□ -1.69
SLC46A1-201ENST00000578217 ATP6V0CP27449 155 aa4.51□□□□□ -1.69
SLC46A1-201ENST00000578217 S100A5P33763 92 aa4.51□□□□□ -1.69
SLC46A1-201ENST00000578217 GAGE2EQ4V326 116 aa4.51□□□□□ -1.69
SLC46A1-201ENST00000578217 GATD1Q8NB37 220 aa4.51□□□□□ -1.69
SLC46A1-201ENST00000578217 TSKUQ8WUA8 353 aa4.51□□□□□ -1.69
SLC46A1-201ENST00000578217 HIST1H2BAQ96A08 127 aa4.51□□□□□ -1.69
SLC46A1-201ENST00000578217 RPL39LQ96EH5 51 aaKnown RBP4.51□□□□□ -1.69
SLC46A1-201ENST00000578217 FMC1Q96HJ9 113 aa4.51□□□□□ -1.69
SLC46A1-201ENST00000578217 GAGE2DQ9UEU5 116 aa4.51□□□□□ -1.69
SLC46A1-201ENST00000578217 FLGP20930 4061 aaPredicted RBP4.5□□□□□ -1.69
SLC46A1-201ENST00000578217 C19orf71A6NCJ1 209 aa4.5□□□□□ -1.69
SLC46A1-201ENST00000578217 ESDP10768 282 aa4.5□□□□□ -1.69
SLC46A1-201ENST00000578217 CNPY1Q3B7I2 92 aa4.5□□□□□ -1.69
SLC46A1-201ENST00000578217 LINC00242Q5T6M2 205 aa4.5□□□□□ -1.69
SLC46A1-201ENST00000578217 C5orf38Q86SI9 138 aa4.5□□□□□ -1.69
SLC46A1-201ENST00000578217 C2orf48Q96LS8 159 aa4.5□□□□□ -1.69
SLC46A1-201ENST00000578217 TPPP3Q9BW30 176 aa4.5□□□□□ -1.69
SLC46A1-201ENST00000578217 INMT-MINDY4F8WBC2 141 aa4.49□□□□□ -1.69
SLC46A1-201ENST00000578217 COX7A2LO14548 114 aa4.49□□□□□ -1.69
SLC46A1-201ENST00000578217 MPC2O95563 127 aa4.49□□□□□ -1.69
SLC46A1-201ENST00000578217 IGLC6P0CF74 106 aa4.49□□□□□ -1.69
SLC46A1-201ENST00000578217 UBE2G1P62253 170 aa4.49□□□□□ -1.69
SLC46A1-201ENST00000578217 SPAG11BQ08648 103 aa4.49□□□□□ -1.69
SLC46A1-201ENST00000578217 RNASE13Q5GAN3 156 aaKnown RBP4.49□□□□□ -1.69
SLC46A1-201ENST00000578217 C9orf129Q5T035 196 aaKnown RBP4.49□□□□□ -1.69
SLC46A1-201ENST00000578217 UNQ6190/PRO20217Q6UXQ8 127 aa4.49□□□□□ -1.69
SLC46A1-201ENST00000578217 Q8N9P0 234 aaPredicted RBP4.49□□□□□ -1.69
SLC46A1-201ENST00000578217 CTDSP1Q9GZU7 261 aa4.49□□□□□ -1.69
SLC46A1-201ENST00000578217 CDC42SE2Q9NRR3 84 aa4.49□□□□□ -1.69
SLC46A1-201ENST00000578217 C6orf48Q9UBA6 75 aa4.49□□□□□ -1.69
SLC46A1-201ENST00000578217 SYNE2Q8WXH0 6885 aaKnown RBP4.49□□□□□ -1.69
SLC46A1-201ENST00000578217 CCDC160A6NGH7 325 aa4.48□□□□□ -1.69
SLC46A1-201ENST00000578217 ACTR3CQ9C0K3 210 aaPredicted RBP4.48□□□□□ -1.69
SLC46A1-201ENST00000578217 SMDT1Q9H4I9 107 aa4.48□□□□□ -1.69
SLC46A1-201ENST00000578217 G3V3Q6 166 aa4.47□□□□□ -1.69
SLC46A1-201ENST00000578217 H7C423 109 aa4.47□□□□□ -1.69
SLC46A1-201ENST00000578217 APCSP02743 223 aa4.47□□□□□ -1.69
SLC46A1-201ENST00000578217 AKR1C3P42330 323 aa4.47□□□□□ -1.69
SLC46A1-201ENST00000578217 FOXA3P55318 350 aaPredicted RBP4.47□□□□□ -1.69
SLC46A1-201ENST00000578217 SEC61BP60468 96 aaKnown RBP4.47□□□□□ -1.69
SLC46A1-201ENST00000578217 LINC00337Q8N6G1 96 aa4.47□□□□□ -1.69
SLC46A1-201ENST00000578217 MRPL35Q9NZE8 188 aaKnown RBP4.47□□□□□ -1.69
SLC46A1-201ENST00000578217 TNFRSF6BO95407 300 aa4.46□□□□□ -1.7
SLC46A1-201ENST00000578217 TLX1NBP0CAT3 122 aa4.46□□□□□ -1.7
SLC46A1-201ENST00000578217 ZNF25P17030 456 aaPredicted RBP4.46□□□□□ -1.7
SLC46A1-201ENST00000578217 NRACQ8N912 160 aa4.46□□□□□ -1.7
SLC46A1-201ENST00000578217 OR2D3Q8NGH3 330 aa4.46□□□□□ -1.7
SLC46A1-201ENST00000578217 PSMG3Q9BT73 122 aaPredicted RBP4.46□□□□□ -1.7
SLC46A1-201ENST00000578217 RNASE7Q9H1E1 156 aaKnown RBP4.46□□□□□ -1.7
SLC46A1-201ENST00000578217 MACF1Q9UPN3 7388 aaKnown RBP4.46□□□□□ -1.7
SLC46A1-201ENST00000578217 TRAV13-1A0A0B4J241 112 aa4.45□□□□□ -1.7
SLC46A1-201ENST00000578217 KRTAP4-16G5E9R7 235 aaPredicted RBP4.45□□□□□ -1.7
SLC46A1-201ENST00000578217 NCR2O95944 276 aa4.45□□□□□ -1.7
SLC46A1-201ENST00000578217 CST9LP1Q5W188 147 aa4.45□□□□□ -1.7
SLC46A1-201ENST00000578217 MZT2BQ6NZ67 158 aa4.45□□□□□ -1.7
SLC46A1-201ENST00000578217 LYZL1Q6UWQ5 148 aa4.45□□□□□ -1.7
SLC46A1-201ENST00000578217 BAGE2Q86Y30 109 aa4.45□□□□□ -1.7
SLC46A1-201ENST00000578217 C3orf22Q8N5N4 141 aa4.45□□□□□ -1.7
SLC46A1-201ENST00000578217 TMEM242Q9NWH2 141 aa4.45□□□□□ -1.7
SLC46A1-201ENST00000578217 TNFSF18Q9UNG2 199 aa4.45□□□□□ -1.7
SLC46A1-201ENST00000578217 CTXND1A0A1B0GTU2 59 aa4.44□□□□□ -1.7
SLC46A1-201ENST00000578217 SDHAF1A6NFY7 115 aa4.44□□□□□ -1.7
SLC46A1-201ENST00000578217 NOL3O60936 208 aaKnown RBP4.44□□□□□ -1.7
SLC46A1-201ENST00000578217 TWIST1Q15672 202 aa4.44□□□□□ -1.7
SLC46A1-201ENST00000578217 MRPL52Q86TS9 123 aaKnown RBP4.44□□□□□ -1.7
SLC46A1-201ENST00000578217 KRTAP13-1Q8IUC0 172 aa4.44□□□□□ -1.7
SLC46A1-201ENST00000578217 ORAOV1Q8WV07 137 aa4.44□□□□□ -1.7
SLC46A1-201ENST00000578217 TMEM101Q96IK0 257 aa4.44□□□□□ -1.7
SLC46A1-201ENST00000578217 BTF3L4Q96K17 158 aa4.44□□□□□ -1.7
SLC46A1-201ENST00000578217 IMMP2LQ96T52 175 aa4.44□□□□□ -1.7
SLC46A1-201ENST00000578217 C1orf196B1AJZ1 125 aa4.43□□□□□ -1.7
SLC46A1-201ENST00000578217 PAGE4O60829 102 aa4.43□□□□□ -1.7
SLC46A1-201ENST00000578217 MBP02144 154 aa4.43□□□□□ -1.7
SLC46A1-201ENST00000578217 CTRLP40313 264 aa4.43□□□□□ -1.7
SLC46A1-201ENST00000578217 SERF2P84101 59 aa4.43□□□□□ -1.7
SLC46A1-201ENST00000578217 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms