RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 NSD1Q96L73 2696 aaPredicted RBP-0.2□□□□□ -2.44
TOP2A-202ENST00000577541 KDM3BQ7LBC6 1761 aa-0.2□□□□□ -2.44
TOP2A-202ENST00000577541 RYR1P21817 5038 aa-0.2□□□□□ -2.44
TOP2A-202ENST00000577541 NHSL1Q5SYE7 1610 aa-0.2□□□□□ -2.44
TOP2A-202ENST00000577541 C10orf71Q711Q0 1435 aa-0.21□□□□□ -2.44
TOP2A-202ENST00000577541 NSD3Q9BZ95 1437 aa-0.21□□□□□ -2.44
TOP2A-202ENST00000577541 A2ML1A8K2U0 1454 aa-0.21□□□□□ -2.44
TOP2A-202ENST00000577541 TRBV7-3A0A075B6L6 115 aa-0.21□□□□□ -2.44
TOP2A-202ENST00000577541 IGLC7A0M8Q6 106 aa-0.21□□□□□ -2.44
TOP2A-202ENST00000577541 HMGN4O00479 90 aa-0.21□□□□□ -2.44
TOP2A-202ENST00000577541 SPINK8P0C7L1 97 aa-0.21□□□□□ -2.44
TOP2A-202ENST00000577541 IFITM1P13164 125 aa-0.21□□□□□ -2.44
TOP2A-202ENST00000577541 WFDC2Q14508 124 aa-0.21□□□□□ -2.44
TOP2A-202ENST00000577541 AQP10Q96PS8 301 aa-0.21□□□□□ -2.44
TOP2A-202ENST00000577541 SPANXDQ9BXN6 97 aa-0.21□□□□□ -2.44
TOP2A-202ENST00000577541 PAIP2BQ9ULR5 123 aaKnown RBP-0.21□□□□□ -2.44
TOP2A-202ENST00000577541 R4GMQ9 66 aa-0.21□□□□□ -2.44
TOP2A-202ENST00000577541 GVINP1Q7Z2Y8 2422 aa-0.21□□□□□ -2.44
TOP2A-202ENST00000577541 HECTD4Q9Y4D8 3996 aa-0.21□□□□□ -2.44
TOP2A-202ENST00000577541 MYH7P12883 1935 aa-0.21□□□□□ -2.44
TOP2A-202ENST00000577541 MYH9P35579 1960 aaKnown RBP-0.21□□□□□ -2.44
TOP2A-202ENST00000577541 RYR2Q92736 4967 aa-0.22□□□□□ -2.44
TOP2A-202ENST00000577541 ZFHX3Q15911 3703 aa-0.22□□□□□ -2.44
TOP2A-202ENST00000577541 PIEZO2Q9H5I5 2752 aa-0.22□□□□□ -2.44
TOP2A-202ENST00000577541 MYH8P13535 1937 aa-0.22□□□□□ -2.44
TOP2A-202ENST00000577541 ERCC6L2Q5T890 1561 aa-0.22□□□□□ -2.44
TOP2A-202ENST00000577541 PLCE1Q9P212 2302 aa-0.22□□□□□ -2.44
TOP2A-202ENST00000577541 TRAV22A0A0B4J277 110 aa-0.22□□□□□ -2.44
TOP2A-202ENST00000577541 CFDP00746 253 aaPredicted RBP-0.22□□□□□ -2.44
TOP2A-202ENST00000577541 SPRR1AP35321 89 aa-0.22□□□□□ -2.44
TOP2A-202ENST00000577541 BTG2P78543 158 aa-0.22□□□□□ -2.44
TOP2A-202ENST00000577541 DEFB109BQ30KR1 87 aa-0.22□□□□□ -2.44
TOP2A-202ENST00000577541 Q56UQ5 140 aa-0.22□□□□□ -2.44
TOP2A-202ENST00000577541 Q8IZM0 81 aa-0.22□□□□□ -2.44
TOP2A-202ENST00000577541 NAA60Q9H7X0 242 aa-0.22□□□□□ -2.44
TOP2A-202ENST00000577541 DCHS2Q6V1P9 2916 aa-0.22□□□□□ -2.45
TOP2A-202ENST00000577541 USF3Q68DE3 2245 aa-0.22□□□□□ -2.45
TOP2A-202ENST00000577541 KDM5AP29375 1690 aaKnown RBP-0.23□□□□□ -2.45
TOP2A-202ENST00000577541 LINC00587B1AMM8 73 aa-0.23□□□□□ -2.45
TOP2A-202ENST00000577541 PIN1P1O15428 100 aa-0.23□□□□□ -2.45
TOP2A-202ENST00000577541 DLEU1O43261 78 aa-0.23□□□□□ -2.45
TOP2A-202ENST00000577541 SPRR2DP22532 72 aa-0.23□□□□□ -2.45
TOP2A-202ENST00000577541 C12orf73Q69YU5 71 aa-0.23□□□□□ -2.45
TOP2A-202ENST00000577541 Q6JHZ5 121 aa-0.23□□□□□ -2.45
TOP2A-202ENST00000577541 COMMD6Q7Z4G1 85 aa-0.23□□□□□ -2.45
TOP2A-202ENST00000577541 C5orf38Q86SI9 138 aa-0.23□□□□□ -2.45
TOP2A-202ENST00000577541 PP6455Q8WZ26 134 aa-0.23□□□□□ -2.45
TOP2A-202ENST00000577541 TP53AIP1Q9HCN2 124 aa-0.23□□□□□ -2.45
TOP2A-202ENST00000577541 DYNLRB1Q9NP97 96 aa-0.23□□□□□ -2.45
TOP2A-202ENST00000577541 RYR3Q15413 4870 aa-0.23□□□□□ -2.45
TOP2A-202ENST00000577541 PAPPAQ13219 1627 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 MYOM1P52179 1685 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 SCN7AQ01118 1682 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 PTPN13Q12923 2485 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 PSME4Q14997 1843 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 DOCK2Q92608 1830 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 WNK3Q9BYP7 1800 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 A0A0D9SFI3 127 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 F8VRH5 84 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 AKAIN1P0CW23 69 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 FGF7P21781 194 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 PI4KAP42356 2102 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 TMEM170BQ5T4T1 132 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 SFTA2Q6UW10 78 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 BAGE2Q86Y30 109 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 MYOZ3Q8TDC0 251 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 LCN9Q8WX39 176 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 MGST2Q99735 147 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 LINC01558Q9Y6Z2 57 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 PKDREJQ9NTG1 2253 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 LRRC37A2A6NM11 1700 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 NALCNQ8IZF0 1738 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 COL6A3P12111 3177 aa-0.24□□□□□ -2.45
TOP2A-202ENST00000577541 FXYD6-FXYD2A0A087WZ82 144 aa-0.25□□□□□ -2.45
TOP2A-202ENST00000577541 SMIM6P0DI80 62 aa-0.25□□□□□ -2.45
TOP2A-202ENST00000577541 KRTAP19-7Q3SYF9 63 aa-0.25□□□□□ -2.45
TOP2A-202ENST00000577541 C9orf153Q5TBE3 101 aa-0.25□□□□□ -2.45
TOP2A-202ENST00000577541 Q5VSD8 79 aa-0.25□□□□□ -2.45
TOP2A-202ENST00000577541 RPL13AP3Q6NVV1 102 aa-0.25□□□□□ -2.45
TOP2A-202ENST00000577541 MRPL54Q6P161 138 aaKnown RBP-0.25□□□□□ -2.45
TOP2A-202ENST00000577541 COPS9Q8WXC6 57 aa-0.25□□□□□ -2.45
TOP2A-202ENST00000577541 PPP3R2Q96LZ3 170 aa-0.25□□□□□ -2.45
TOP2A-202ENST00000577541 CDC42SE2Q9NRR3 84 aa-0.25□□□□□ -2.45
TOP2A-202ENST00000577541 MYOM2P54296 1465 aa-0.25□□□□□ -2.45
TOP2A-202ENST00000577541 HMGXB3Q12766 1538 aa-0.25□□□□□ -2.45
TOP2A-202ENST00000577541 TET3O43151 1660 aa-0.25□□□□□ -2.45
TOP2A-202ENST00000577541 BTAF1O14981 1849 aa-0.25□□□□□ -2.45
TOP2A-202ENST00000577541 SPTBN1Q01082 2364 aaKnown RBP-0.25□□□□□ -2.45
TOP2A-202ENST00000577541 TENM2Q9NT68 2774 aa-0.26□□□□□ -2.45
TOP2A-202ENST00000577541 ATRQ13535 2644 aa-0.26□□□□□ -2.45
TOP2A-202ENST00000577541 CC2D2AQ9P2K1 1620 aa-0.26□□□□□ -2.45
TOP2A-202ENST00000577541 SHANK2Q9UPX8 1470 aa-0.26□□□□□ -2.45
TOP2A-202ENST00000577541 CHKB-CPT1BH3BT56 60 aa-0.26□□□□□ -2.45
TOP2A-202ENST00000577541 UQCR11O14957 56 aa-0.26□□□□□ -2.45
TOP2A-202ENST00000577541 IFNGP01579 166 aa-0.26□□□□□ -2.45
TOP2A-202ENST00000577541 APOC2P02655 101 aa-0.26□□□□□ -2.45
TOP2A-202ENST00000577541 KRTAP20-2Q3LI61 65 aa-0.26□□□□□ -2.45
TOP2A-202ENST00000577541 FAM223AQ8IWN6 122 aa-0.26□□□□□ -2.45
TOP2A-202ENST00000577541 SMIM4Q8WVI0 70 aa-0.26□□□□□ -2.45
TOP2A-202ENST00000577541 DPH3P1Q9H4G8 78 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms