RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 Q0VG73 95 aa0.94□□□□□ -2.26
TRAPPC8-203ENST00000577474 NXT2Q9NPJ8 142 aaKnown RBP0.94□□□□□ -2.26
TRAPPC8-203ENST00000577474 FAIMQ9NVQ4 179 aa0.94□□□□□ -2.26
TRAPPC8-203ENST00000577474 AP4S1Q9Y587 144 aa0.94□□□□□ -2.26
TRAPPC8-203ENST00000577474 ASXL3Q9C0F0 2248 aa0.94□□□□□ -2.26
TRAPPC8-203ENST00000577474 IFT172Q9UG01 1749 aa0.93□□□□□ -2.26
TRAPPC8-203ENST00000577474 TRAV22A0A0B4J277 110 aa0.93□□□□□ -2.26
TRAPPC8-203ENST00000577474 S100A8P05109 93 aa0.93□□□□□ -2.26
TRAPPC8-203ENST00000577474 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
TRAPPC8-203ENST00000577474 SHANK2Q9UPX8 1470 aa0.92□□□□□ -2.26
TRAPPC8-203ENST00000577474 VPS8Q8N3P4 1428 aa0.92□□□□□ -2.26
TRAPPC8-203ENST00000577474 CNTLNQ9NXG0 1405 aa0.92□□□□□ -2.26
TRAPPC8-203ENST00000577474 CRYM-AS1A6NIL9 109 aa0.92□□□□□ -2.26
TRAPPC8-203ENST00000577474 MGPP08493 103 aa0.92□□□□□ -2.26
TRAPPC8-203ENST00000577474 LINC00032P0C843 101 aa0.92□□□□□ -2.26
TRAPPC8-203ENST00000577474 TRAPPC2P0DI81 140 aa0.92□□□□□ -2.26
TRAPPC8-203ENST00000577474 TRAPPC2BP0DI82 140 aa0.92□□□□□ -2.26
TRAPPC8-203ENST00000577474 AHCTF1Q8WYP5 2266 aa0.91□□□□□ -2.26
TRAPPC8-203ENST00000577474 ZNF469Q96JG9 3925 aaPredicted RBP0.91□□□□□ -2.26
TRAPPC8-203ENST00000577474 NDUFC1O43677 76 aa0.91□□□□□ -2.26
TRAPPC8-203ENST00000577474 FAM213BQ8TBF2 198 aa0.91□□□□□ -2.26
TRAPPC8-203ENST00000577474 SPHKAPQ2M3C7 1700 aa0.91□□□□□ -2.26
TRAPPC8-203ENST00000577474 SHROOM2Q13796 1616 aa0.9□□□□□ -2.26
TRAPPC8-203ENST00000577474 LRRC37A2A6NM11 1700 aa0.9□□□□□ -2.27
TRAPPC8-203ENST00000577474 ZNF815PA8K554 130 aa0.9□□□□□ -2.27
TRAPPC8-203ENST00000577474 M0R143 59 aa0.9□□□□□ -2.27
TRAPPC8-203ENST00000577474 S100A10P60903 97 aa0.9□□□□□ -2.27
TRAPPC8-203ENST00000577474 SPINK6Q6UWN8 80 aa0.9□□□□□ -2.27
TRAPPC8-203ENST00000577474 SSBP3-AS1Q7Z2R9 100 aa0.9□□□□□ -2.27
TRAPPC8-203ENST00000577474 CNFNQ9BYD5 112 aa0.9□□□□□ -2.27
TRAPPC8-203ENST00000577474 FAM208BQ5VWN6 2430 aa0.89□□□□□ -2.27
TRAPPC8-203ENST00000577474 TTC28Q96AY4 2481 aa0.89□□□□□ -2.27
TRAPPC8-203ENST00000577474 SEC11AP67812 179 aa0.89□□□□□ -2.27
TRAPPC8-203ENST00000577474 ARL2-SNX15V9GYD0 113 aa0.89□□□□□ -2.27
TRAPPC8-203ENST00000577474 MYOM1P52179 1685 aa0.88□□□□□ -2.27
TRAPPC8-203ENST00000577474 HAMPP81172 84 aa0.88□□□□□ -2.27
TRAPPC8-203ENST00000577474 DPY30Q9C005 99 aa0.88□□□□□ -2.27
TRAPPC8-203ENST00000577474 BDP1A6H8Y1 2624 aa0.87□□□□□ -2.27
TRAPPC8-203ENST00000577474 hADV29S1A0JD25 119 aa0.87□□□□□ -2.27
TRAPPC8-203ENST00000577474 IGLC1P0CG04 106 aa0.87□□□□□ -2.27
TRAPPC8-203ENST00000577474 SAA2P0DJI9 122 aaPredicted RBP0.87□□□□□ -2.27
TRAPPC8-203ENST00000577474 LINC00472Q9H8W2 130 aa0.87□□□□□ -2.27
TRAPPC8-203ENST00000577474 ABCC5O15440 1437 aa0.87□□□□□ -2.27
TRAPPC8-203ENST00000577474 MUC5BQ9HC84 5762 aaPredicted RBP0.87□□□□□ -2.27
TRAPPC8-203ENST00000577474 TEX14Q8IWB6 1497 aa0.86□□□□□ -2.27
TRAPPC8-203ENST00000577474 GNGT2O14610 69 aa0.86□□□□□ -2.27
TRAPPC8-203ENST00000577474 Q6JHZ5 121 aa0.86□□□□□ -2.27
TRAPPC8-203ENST00000577474 FAM223AQ8IWN6 122 aa0.86□□□□□ -2.27
TRAPPC8-203ENST00000577474 TMEM263Q8WUH6 116 aaKnown RBP0.86□□□□□ -2.27
TRAPPC8-203ENST00000577474 SPCS1Q9Y6A9 102 aa0.86□□□□□ -2.27
TRAPPC8-203ENST00000577474 F8P00451 2351 aa0.86□□□□□ -2.27
TRAPPC8-203ENST00000577474 EHBP1L1Q8N3D4 1523 aa0.85□□□□□ -2.27
TRAPPC8-203ENST00000577474 PRH1P02810 166 aa0.85□□□□□ -2.27
TRAPPC8-203ENST00000577474 DIP2CQ9Y2E4 1556 aa0.85□□□□□ -2.27
TRAPPC8-203ENST00000577474 TPRP12270 2363 aaKnown RBP0.85□□□□□ -2.27
TRAPPC8-203ENST00000577474 ABCA12Q86UK0 2595 aa0.85□□□□□ -2.27
TRAPPC8-203ENST00000577474 PSME4Q14997 1843 aa0.85□□□□□ -2.27
TRAPPC8-203ENST00000577474 HMGXB3Q12766 1538 aa0.84□□□□□ -2.27
TRAPPC8-203ENST00000577474 TCHHQ07283 1943 aa0.84□□□□□ -2.27
TRAPPC8-203ENST00000577474 SPRR4Q96PI1 79 aa0.84□□□□□ -2.27
TRAPPC8-203ENST00000577474 RAPGEF6Q8TEU7 1601 aa0.84□□□□□ -2.28
TRAPPC8-203ENST00000577474 GAPVD1Q14C86 1478 aa0.84□□□□□ -2.28
TRAPPC8-203ENST00000577474 SPTBN2O15020 2390 aa0.84□□□□□ -2.28
TRAPPC8-203ENST00000577474 KIF21AQ7Z4S6 1674 aa0.84□□□□□ -2.28
TRAPPC8-203ENST00000577474 AHNAK2Q8IVF2 5795 aa0.84□□□□□ -2.28
TRAPPC8-203ENST00000577474 GOLGA4Q13439 2230 aaKnown RBP0.84□□□□□ -2.28
TRAPPC8-203ENST00000577474 CCNB3Q8WWL7 1395 aa0.83□□□□□ -2.28
TRAPPC8-203ENST00000577474 NSD3Q9BZ95 1437 aa0.83□□□□□ -2.28
TRAPPC8-203ENST00000577474 COL5A1-AS1Q5SY13 56 aa0.83□□□□□ -2.28
TRAPPC8-203ENST00000577474 NCMAPQ5T1S8 102 aa0.83□□□□□ -2.28
TRAPPC8-203ENST00000577474 SMR3AQ99954 134 aa0.83□□□□□ -2.28
TRAPPC8-203ENST00000577474 FYCO1Q9BQS8 1478 aa0.83□□□□□ -2.28
TRAPPC8-203ENST00000577474 AHNAKQ09666 5890 aaKnown RBP0.82□□□□□ -2.28
TRAPPC8-203ENST00000577474 A0A1B0GWA3 101 aa0.82□□□□□ -2.28
TRAPPC8-203ENST00000577474 ATOX1O00244 68 aa0.82□□□□□ -2.28
TRAPPC8-203ENST00000577474 PKIAP61925 76 aa0.82□□□□□ -2.28
TRAPPC8-203ENST00000577474 UBA52P62987 128 aaKnown RBP0.82□□□□□ -2.28
TRAPPC8-203ENST00000577474 GPR98Q8WXG9 6306 aa0.81□□□□□ -2.28
TRAPPC8-203ENST00000577474 MPC2O95563 127 aa0.81□□□□□ -2.28
TRAPPC8-203ENST00000577474 MT-ATP8P03928 68 aa0.81□□□□□ -2.28
TRAPPC8-203ENST00000577474 PMCHL2Q9BQD1 86 aa0.81□□□□□ -2.28
TRAPPC8-203ENST00000577474 VAMP8Q9BV40 100 aa0.81□□□□□ -2.28
TRAPPC8-203ENST00000577474 PRO1933Q9H354 126 aa0.81□□□□□ -2.28
TRAPPC8-203ENST00000577474 PRDM15P57071 1507 aaPredicted RBP0.8□□□□□ -2.28
TRAPPC8-203ENST00000577474 ERCC6L2Q5T890 1561 aa0.8□□□□□ -2.28
TRAPPC8-203ENST00000577474 FRAS1Q86XX4 4008 aa0.8□□□□□ -2.28
TRAPPC8-203ENST00000577474 LINC00846Q9NV44 126 aa0.8□□□□□ -2.28
TRAPPC8-203ENST00000577474 SBF2Q86WG5 1849 aa0.8□□□□□ -2.28
TRAPPC8-203ENST00000577474 CC2D2AQ9P2K1 1620 aa0.79□□□□□ -2.28
TRAPPC8-203ENST00000577474 KDM3BQ7LBC6 1761 aa0.79□□□□□ -2.28
TRAPPC8-203ENST00000577474 FAM223BA6NKX1 122 aa0.79□□□□□ -2.28
TRAPPC8-203ENST00000577474 SFTA2Q6UW10 78 aa0.79□□□□□ -2.28
TRAPPC8-203ENST00000577474 TRGV9Q99603 122 aa0.79□□□□□ -2.28
TRAPPC8-203ENST00000577474 CACFD1Q9UGQ2 172 aa0.79□□□□□ -2.28
TRAPPC8-203ENST00000577474 PRO0255Q9UI72 69 aa0.79□□□□□ -2.28
TRAPPC8-203ENST00000577474 CACNA1CQ13936 2221 aa0.79□□□□□ -2.28
TRAPPC8-203ENST00000577474 TET3O43151 1660 aa0.78□□□□□ -2.28
TRAPPC8-203ENST00000577474 WNK3Q9BYP7 1800 aa0.78□□□□□ -2.28
TRAPPC8-203ENST00000577474 M0R3E3 92 aa0.78□□□□□ -2.28
TRAPPC8-203ENST00000577474 BCE1O60756 84 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms