RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 DNAH5Q8TE73 4624 aa13.26□□□□□ -0.29
SUPT4H1-202ENST00000577396 RPL39P62891 51 aaKnown RBP13.26□□□□□ -0.29
SUPT4H1-202ENST00000577396 OR5A1Q8NGJ0 315 aa13.26□□□□□ -0.29
SUPT4H1-202ENST00000577396 TMEM101Q96IK0 257 aa13.26□□□□□ -0.29
SUPT4H1-202ENST00000577396 TIMM21Q9BVV7 248 aa13.26□□□□□ -0.29
SUPT4H1-202ENST00000577396 C1orf43Q9BWL3 253 aa13.26□□□□□ -0.29
SUPT4H1-202ENST00000577396 DYNC1H1Q14204 4646 aaKnown RBP13.25□□□□□ -0.29
SUPT4H1-202ENST00000577396 K7EMI3 77 aa13.25□□□□□ -0.29
SUPT4H1-202ENST00000577396 FAM104AQ969W3 186 aa13.25□□□□□ -0.29
SUPT4H1-202ENST00000577396 TMEM18Q96B42 140 aa13.25□□□□□ -0.29
SUPT4H1-202ENST00000577396 TRAV8-4A0A0B4J246 113 aa13.24□□□□□ -0.29
SUPT4H1-202ENST00000577396 ZNF664Q8N3J9 261 aa13.24□□□□□ -0.29
SUPT4H1-202ENST00000577396 WFDC2Q14508 124 aa13.23□□□□□ -0.29
SUPT4H1-202ENST00000577396 IGLV10-54A0A075B6I4 117 aa13.22□□□□□ -0.29
SUPT4H1-202ENST00000577396 LINC01546A6NGU7 62 aa13.22□□□□□ -0.29
SUPT4H1-202ENST00000577396 COLCA2A8K830 154 aa13.22□□□□□ -0.29
SUPT4H1-202ENST00000577396 SMAGPQ0VAQ4 97 aa13.22□□□□□ -0.29
SUPT4H1-202ENST00000577396 DGAT2L7PQ6IED9 249 aa13.22□□□□□ -0.29
SUPT4H1-202ENST00000577396 BAALCQ8WXS3 180 aa13.22□□□□□ -0.29
SUPT4H1-202ENST00000577396 KRTAP10-2P60368 255 aa13.21□□□□□ -0.29
SUPT4H1-202ENST00000577396 ORMDL2Q53FV1 153 aa13.21□□□□□ -0.29
SUPT4H1-202ENST00000577396 PRSS3P2Q8NHM4 247 aa13.21□□□□□ -0.29
SUPT4H1-202ENST00000577396 SPANXA1Q9NS26 97 aa13.21□□□□□ -0.3
SUPT4H1-202ENST00000577396 IGKV3OR2-268A0A0C4DH90 116 aa13.2□□□□□ -0.3
SUPT4H1-202ENST00000577396 SCO1O75880 301 aa13.2□□□□□ -0.3
SUPT4H1-202ENST00000577396 SPATA12Q7Z6I5 190 aa13.2□□□□□ -0.3
SUPT4H1-202ENST00000577396 C18orf32Q8TCD1 76 aa13.2□□□□□ -0.3
SUPT4H1-202ENST00000577396 PYGO1Q9Y3Y4 419 aa13.2□□□□□ -0.3
SUPT4H1-202ENST00000577396 LINC00959A0A1B0GUT2 108 aa13.19□□□□□ -0.3
SUPT4H1-202ENST00000577396 EREGO14944 169 aa13.19□□□□□ -0.3
SUPT4H1-202ENST00000577396 C2orf66Q6UXQ4 117 aa13.19□□□□□ -0.3
SUPT4H1-202ENST00000577396 LRP1BQ9NZR2 4599 aa13.19□□□□□ -0.3
SUPT4H1-202ENST00000577396 LECT2O14960 151 aa13.18□□□□□ -0.3
SUPT4H1-202ENST00000577396 MRPS36P82909 103 aaKnown RBP13.18□□□□□ -0.3
SUPT4H1-202ENST00000577396 Q6ZUT4 128 aa13.18□□□□□ -0.3
SUPT4H1-202ENST00000577396 OPRPNQ99935 248 aaPredicted RBP13.18□□□□□ -0.3
SUPT4H1-202ENST00000577396 RNASE13Q5GAN3 156 aaKnown RBP13.17□□□□□ -0.3
SUPT4H1-202ENST00000577396 Q8N814 137 aa13.17□□□□□ -0.3
SUPT4H1-202ENST00000577396 URB1-AS1Q96HZ7 61 aa13.17□□□□□ -0.3
SUPT4H1-202ENST00000577396 CYSLTR1Q9Y271 337 aa13.17□□□□□ -0.3
SUPT4H1-202ENST00000577396 CHCHD10Q8WYQ3 142 aaPredicted RBP13.17□□□□□ -0.3
SUPT4H1-202ENST00000577396 PGPEP1Q9NXJ5 209 aa13.17□□□□□ -0.3
SUPT4H1-202ENST00000577396 IGIPA6NJ69 53 aa13.15□□□□□ -0.3
SUPT4H1-202ENST00000577396 TRGC2P03986 189 aa13.15□□□□□ -0.3
SUPT4H1-202ENST00000577396 FUSP35637 526 aaKnown RBP eCLIP13.15□□□□□ -0.3
SUPT4H1-202ENST00000577396 G0S2P27469 103 aa13.14□□□□□ -0.31
SUPT4H1-202ENST00000577396 FA2HQ7L5A8 372 aa13.14□□□□□ -0.31
SUPT4H1-202ENST00000577396 TOMM6Q96B49 74 aa13.14□□□□□ -0.31
SUPT4H1-202ENST00000577396 IGLV4-3A0A075B6K6 122 aa13.13□□□□□ -0.31
SUPT4H1-202ENST00000577396 GAGE12HA6NDE8 117 aa13.13□□□□□ -0.31
SUPT4H1-202ENST00000577396 LINC00614P0C842 121 aa13.13□□□□□ -0.31
SUPT4H1-202ENST00000577396 USP17L23D6RBM5 183 aa13.13□□□□□ -0.31
SUPT4H1-202ENST00000577396 FOXI1Q12951 378 aa13.13□□□□□ -0.31
SUPT4H1-202ENST00000577396 SS18Q15532 418 aa13.13□□□□□ -0.31
SUPT4H1-202ENST00000577396 C1orf196B1AJZ1 125 aa13.12□□□□□ -0.31
SUPT4H1-202ENST00000577396 CCL25O15444 150 aa13.12□□□□□ -0.31
SUPT4H1-202ENST00000577396 AP5S1Q9NUS5 200 aa13.12□□□□□ -0.31
SUPT4H1-202ENST00000577396 TRAV13-1A0A0B4J241 112 aa13.11□□□□□ -0.31
SUPT4H1-202ENST00000577396 NPSP0C0P6 89 aa13.11□□□□□ -0.31
SUPT4H1-202ENST00000577396 XCL1P47992 114 aa13.11□□□□□ -0.31
SUPT4H1-202ENST00000577396 CDPF1Q6NVV7 123 aa13.11□□□□□ -0.31
SUPT4H1-202ENST00000577396 S100A1P23297 94 aa13.1□□□□□ -0.31
SUPT4H1-202ENST00000577396 CD164L2Q6UWJ8 174 aa13.1□□□□□ -0.31
SUPT4H1-202ENST00000577396 TMEM141Q96I45 108 aa13.1□□□□□ -0.31
SUPT4H1-202ENST00000577396 A0A096LNJ9 63 aa13.1□□□□□ -0.31
SUPT4H1-202ENST00000577396 C16orf90A8MZG2 172 aa13.1□□□□□ -0.31
SUPT4H1-202ENST00000577396 ATP6V1G1O75348 118 aa13.1□□□□□ -0.31
SUPT4H1-202ENST00000577396 NTN5Q8WTR8 489 aaPredicted RBP13.1□□□□□ -0.31
SUPT4H1-202ENST00000577396 TIMM17AQ99595 171 aa13.1□□□□□ -0.31
SUPT4H1-202ENST00000577396 KIAA1109Q2LD37 5005 aa13.09□□□□□ -0.31
SUPT4H1-202ENST00000577396 ERASQ7Z444 233 aa13.09□□□□□ -0.31
SUPT4H1-202ENST00000577396 AMELXQ99217 191 aa13.09□□□□□ -0.31
SUPT4H1-202ENST00000577396 LINC01549A6NIU2 74 aa13.08□□□□□ -0.32
SUPT4H1-202ENST00000577396 RAB5BP61020 215 aa13.08□□□□□ -0.32
SUPT4H1-202ENST00000577396 LINC00173Q6ZV60 143 aa13.08□□□□□ -0.32
SUPT4H1-202ENST00000577396 PRSS1P07477 247 aa13.07□□□□□ -0.32
SUPT4H1-202ENST00000577396 C14orf177Q52M58 125 aa13.07□□□□□ -0.32
SUPT4H1-202ENST00000577396 ZC2HC1BQ5TFG8 222 aa13.07□□□□□ -0.32
SUPT4H1-202ENST00000577396 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.06□□□□□ -0.32
SUPT4H1-202ENST00000577396 IFITM10A6NMD0 228 aa13.06□□□□□ -0.32
SUPT4H1-202ENST00000577396 C15orf56Q8N910 161 aa13.06□□□□□ -0.32
SUPT4H1-202ENST00000577396 SCGB3A1Q96QR1 104 aa13.06□□□□□ -0.32
SUPT4H1-202ENST00000577396 VCX2Q9H322 139 aa13.06□□□□□ -0.32
SUPT4H1-202ENST00000577396 IGLV5-52A0A0A0MRZ9 124 aa13.06□□□□□ -0.32
SUPT4H1-202ENST00000577396 TEX43Q6ZNM6 134 aa13.06□□□□□ -0.32
SUPT4H1-202ENST00000577396 UBE2D1P51668 147 aa13.04□□□□□ -0.32
SUPT4H1-202ENST00000577396 PMCHL1Q16048 86 aa13.04□□□□□ -0.32
SUPT4H1-202ENST00000577396 Q6ZN92 141 aa13.04□□□□□ -0.32
SUPT4H1-202ENST00000577396 CHCHD1Q96BP2 118 aaKnown RBP13.04□□□□□ -0.32
SUPT4H1-202ENST00000577396 IGHV3OR16-9A0A0B4J2B5 98 aa13.03□□□□□ -0.32
SUPT4H1-202ENST00000577396 PAPPA-AS1Q5QFB9 102 aa13.03□□□□□ -0.32
SUPT4H1-202ENST00000577396 LINC00242Q5T6M2 205 aa13.03□□□□□ -0.32
SUPT4H1-202ENST00000577396 CFAP161Q6P656 301 aa13.03□□□□□ -0.32
SUPT4H1-202ENST00000577396 APOBP04114 4563 aaKnown RBP13.03□□□□□ -0.32
SUPT4H1-202ENST00000577396 RYR1P21817 5038 aa13.02□□□□□ -0.32
SUPT4H1-202ENST00000577396 HBDP02042 147 aa13.02□□□□□ -0.33
SUPT4H1-202ENST00000577396 GCSHP23434 173 aa13.02□□□□□ -0.33
SUPT4H1-202ENST00000577396 KRTAP10-1P60331 282 aa13.02□□□□□ -0.33
SUPT4H1-202ENST00000577396 PDZD11Q5EBL8 140 aa13.02□□□□□ -0.33
SUPT4H1-202ENST00000577396 COX7A2LO14548 114 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 1894.5 ms