RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 C12orf57Q99622 126 aa8.6□□□□□ -1.03
TSEN54-204ENST00000577197 VCX2Q9H322 139 aa8.6□□□□□ -1.03
TSEN54-204ENST00000577197 CST9LQ9H4G1 147 aa8.6□□□□□ -1.03
TSEN54-204ENST00000577197 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.59□□□□□ -1.03
TSEN54-204ENST00000577197 IGKV2-29A2NJV5 120 aaPredicted RBP8.59□□□□□ -1.03
TSEN54-204ENST00000577197 PRSS29PA6NIE9 313 aa8.59□□□□□ -1.03
TSEN54-204ENST00000577197 CCL25O15444 150 aa8.59□□□□□ -1.03
TSEN54-204ENST00000577197 DPM2O94777 84 aa8.59□□□□□ -1.03
TSEN54-204ENST00000577197 SEC11AP67812 179 aa8.59□□□□□ -1.03
TSEN54-204ENST00000577197 LYPD5Q6UWN5 251 aa8.59□□□□□ -1.03
TSEN54-204ENST00000577197 NFE4Q86UQ8 179 aa8.59□□□□□ -1.03
TSEN54-204ENST00000577197 MUC7Q8TAX7 377 aa8.59□□□□□ -1.03
TSEN54-204ENST00000577197 FAM104AQ969W3 186 aa8.59□□□□□ -1.03
TSEN54-204ENST00000577197 C2orf88Q9BSF0 95 aa8.59□□□□□ -1.03
TSEN54-204ENST00000577197 CHCHD5Q9BSY4 110 aa8.59□□□□□ -1.03
TSEN54-204ENST00000577197 CDC42SE2Q9NRR3 84 aa8.59□□□□□ -1.03
TSEN54-204ENST00000577197 TGP01266 2768 aa8.58□□□□□ -1.04
TSEN54-204ENST00000577197 TRAV8-6A0A0B4J262 113 aa8.58□□□□□ -1.04
TSEN54-204ENST00000577197 NUPR2A6NF83 97 aa8.58□□□□□ -1.04
TSEN54-204ENST00000577197 ZNF664Q8N3J9 261 aa8.58□□□□□ -1.04
TSEN54-204ENST00000577197 CHTOPQ9Y3Y2 248 aaKnown RBP8.58□□□□□ -1.04
TSEN54-204ENST00000577197 TRAV9-2A0A087WT02 112 aa8.57□□□□□ -1.04
TSEN54-204ENST00000577197 IGKCP01834 107 aa8.57□□□□□ -1.04
TSEN54-204ENST00000577197 IGLC3P0DOY3 106 aa8.57□□□□□ -1.04
TSEN54-204ENST00000577197 CEMP1Q6PRD7 247 aaPredicted RBP8.57□□□□□ -1.04
TSEN54-204ENST00000577197 VAMP8Q9BV40 100 aa8.57□□□□□ -1.04
TSEN54-204ENST00000577197 HSBP1L1C9JCN9 74 aa8.56□□□□□ -1.04
TSEN54-204ENST00000577197 C3orf84H3BNL1 204 aa8.56□□□□□ -1.04
TSEN54-204ENST00000577197 MRPL35Q9NZE8 188 aaKnown RBP8.56□□□□□ -1.04
TSEN54-204ENST00000577197 KLK5Q9Y337 293 aaPredicted RBP8.56□□□□□ -1.04
TSEN54-204ENST00000577197 IGLV4-69A0A075B6H9 119 aa8.55□□□□□ -1.04
TSEN54-204ENST00000577197 TINCRA0A1B0GVN0 87 aa8.55□□□□□ -1.04
TSEN54-204ENST00000577197 K7EP13 123 aa8.55□□□□□ -1.04
TSEN54-204ENST00000577197 Q6ZUT4 128 aa8.55□□□□□ -1.04
TSEN54-204ENST00000577197 DEFB104AQ8WTQ1 72 aa8.55□□□□□ -1.04
TSEN54-204ENST00000577197 UPK3BQ9BT76 320 aa8.55□□□□□ -1.04
TSEN54-204ENST00000577197 IGLV5-45A0A087WSX0 123 aa8.54□□□□□ -1.04
TSEN54-204ENST00000577197 C11orf86A6NJI1 115 aa8.54□□□□□ -1.04
TSEN54-204ENST00000577197 H0Y8G0 127 aa8.54□□□□□ -1.04
TSEN54-204ENST00000577197 UBE2D1P51668 147 aa8.54□□□□□ -1.04
TSEN54-204ENST00000577197 RBX1P62877 108 aa8.54□□□□□ -1.04
TSEN54-204ENST00000577197 GAGE6Q13070 117 aa8.54□□□□□ -1.04
TSEN54-204ENST00000577197 MRPS16Q9Y3D3 137 aaKnown RBP8.54□□□□□ -1.04
TSEN54-204ENST00000577197 CCL18P55774 89 aa8.53□□□□□ -1.04
TSEN54-204ENST00000577197 HERVK_113P63121 156 aa8.53□□□□□ -1.04
TSEN54-204ENST00000577197 IGLL5B9A064 214 aa8.52□□□□□ -1.05
TSEN54-204ENST00000577197 ESRGQ1W209 222 aa8.52□□□□□ -1.05
TSEN54-204ENST00000577197 MPV17L2Q567V2 206 aa8.52□□□□□ -1.05
TSEN54-204ENST00000577197 LINC01556Q5JQF7 62 aa8.52□□□□□ -1.05
TSEN54-204ENST00000577197 ZFAND6Q6FIF0 208 aa8.52□□□□□ -1.05
TSEN54-204ENST00000577197 OPRPNQ99935 248 aaPredicted RBP8.52□□□□□ -1.05
TSEN54-204ENST00000577197 IGLV4-60A0A075B6I1 120 aa8.51□□□□□ -1.05
TSEN54-204ENST00000577197 TMEM262E9PQX1 116 aa8.51□□□□□ -1.05
TSEN54-204ENST00000577197 DNAH10OSP0CZ25 163 aa8.51□□□□□ -1.05
TSEN54-204ENST00000577197 HERVK_113P61574 105 aa8.51□□□□□ -1.05
TSEN54-204ENST00000577197 CDPF1Q6NVV7 123 aa8.51□□□□□ -1.05
TSEN54-204ENST00000577197 CHAC1Q9BUX1 264 aa8.51□□□□□ -1.05
TSEN54-204ENST00000577197 PRR34Q9NV39 138 aa8.51□□□□□ -1.05
TSEN54-204ENST00000577197 TSTD3H0UI37 97 aa8.5□□□□□ -1.05
TSEN54-204ENST00000577197 SPATA45Q537H7 98 aa8.5□□□□□ -1.05
TSEN54-204ENST00000577197 CASC10Q5T4H9 136 aa8.5□□□□□ -1.05
TSEN54-204ENST00000577197 ZC2HC1BQ5TFG8 222 aa8.5□□□□□ -1.05
TSEN54-204ENST00000577197 LINC01561Q8N1V8 128 aa8.5□□□□□ -1.05
TSEN54-204ENST00000577197 PMCHL2Q9BQD1 86 aa8.5□□□□□ -1.05
TSEN54-204ENST00000577197 H3BRM9 83 aa8.49□□□□□ -1.05
TSEN54-204ENST00000577197 LINC00242Q5T6M2 205 aa8.49□□□□□ -1.05
TSEN54-204ENST00000577197 GEMIN7Q9H840 131 aaKnown RBP8.49□□□□□ -1.05
TSEN54-204ENST00000577197 APLNQ9ULZ1 77 aa8.49□□□□□ -1.05
TSEN54-204ENST00000577197 DNAH7Q8WXX0 4024 aa8.49□□□□□ -1.05
TSEN54-204ENST00000577197 TRAV8-4A0A0B4J246 113 aa8.48□□□□□ -1.05
TSEN54-204ENST00000577197 A0A0J9YXV3 536 aa8.48□□□□□ -1.05
TSEN54-204ENST00000577197 E9PLD3 99 aa8.48□□□□□ -1.05
TSEN54-204ENST00000577197 DLEU1O43261 78 aa8.48□□□□□ -1.05
TSEN54-204ENST00000577197 ZNF22P17026 224 aaPredicted RBP8.48□□□□□ -1.05
TSEN54-204ENST00000577197 SS18Q15532 418 aa8.48□□□□□ -1.05
TSEN54-204ENST00000577197 ATOH7Q8N100 152 aa8.48□□□□□ -1.05
TSEN54-204ENST00000577197 C10orf126Q8N4M7 172 aa8.48□□□□□ -1.05
TSEN54-204ENST00000577197 PAM16Q9Y3D7 125 aa8.48□□□□□ -1.05
TSEN54-204ENST00000577197 LINC00959A0A1B0GUT2 108 aa8.47□□□□□ -1.05
TSEN54-204ENST00000577197 TMEM223A0PJW6 202 aa8.47□□□□□ -1.05
TSEN54-204ENST00000577197 REG3AQ06141 175 aa8.47□□□□□ -1.05
TSEN54-204ENST00000577197 MIAQ16674 131 aa8.47□□□□□ -1.05
TSEN54-204ENST00000577197 LINC00588Q9Y4M8 146 aa8.47□□□□□ -1.05
TSEN54-204ENST00000577197 hDV102S1A0JD36 115 aa8.46□□□□□ -1.06
TSEN54-204ENST00000577197 ANGP03950 147 aaKnown RBP8.46□□□□□ -1.06
TSEN54-204ENST00000577197 RNASE13Q5GAN3 156 aaKnown RBP8.46□□□□□ -1.06
TSEN54-204ENST00000577197 WFDC10BQ8IUB3 73 aa8.46□□□□□ -1.06
TSEN54-204ENST00000577197 TRAV13-1A0A0B4J241 112 aa8.45□□□□□ -1.06
TSEN54-204ENST00000577197 IGHV3OR16-9A0A0B4J2B5 98 aa8.45□□□□□ -1.06
TSEN54-204ENST00000577197 SIVA1O15304 175 aa8.45□□□□□ -1.06
TSEN54-204ENST00000577197 COX8AP10176 69 aa8.45□□□□□ -1.06
TSEN54-204ENST00000577197 TMEM170BQ5T4T1 132 aa8.45□□□□□ -1.06
TSEN54-204ENST00000577197 CD164L2Q6UWJ8 174 aa8.45□□□□□ -1.06
TSEN54-204ENST00000577197 LINC00269Q8N2A0 174 aa8.45□□□□□ -1.06
TSEN54-204ENST00000577197 LINC00469Q8N7U9 141 aa8.45□□□□□ -1.06
TSEN54-204ENST00000577197 STPG4Q8N801 248 aa8.45□□□□□ -1.06
TSEN54-204ENST00000577197 PLEKHB2Q96CS7 222 aa8.45□□□□□ -1.06
TSEN54-204ENST00000577197 UQCR10Q9UDW1 63 aa8.45□□□□□ -1.06
TSEN54-204ENST00000577197 A0A087WZ39 114 aa8.44□□□□□ -1.06
TSEN54-204ENST00000577197 IGLV5-39A0A0G2JS06 123 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms