RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	TRGV11	A0A075B6L2	103 aa		10.73	□□□□□ -0.69
PRPF8-216	ENST00000577001	LEPROT	O15243	131 aa		10.73	□□□□□ -0.69
PRPF8-216	ENST00000577001	RS1	O15537	224 aa		10.73	□□□□□ -0.69
PRPF8-216	ENST00000577001	KLK9	Q2XQG4	91 aa		10.73	□□□□□ -0.69
PRPF8-216	ENST00000577001	NSUN5P1	Q3KNT7	163 aa		10.73	□□□□□ -0.69
PRPF8-216	ENST00000577001	ATP6V0B	Q99437	205 aa		10.73	□□□□□ -0.69
PRPF8-216	ENST00000577001	TEP1	Q99973	2627 aa	Known RBP	10.73	□□□□□ -0.69
PRPF8-216	ENST00000577001	MEIG1	Q5JSS6	88 aa		10.72	□□□□□ -0.69
PRPF8-216	ENST00000577001	FLNB	O75369	2602 aa	Known RBP	10.72	□□□□□ -0.69
PRPF8-216	ENST00000577001	CR1	P17927	2039 aa		10.72	□□□□□ -0.69
PRPF8-216	ENST00000577001	TRAV26-1	A0A087WT03	109 aa		10.72	□□□□□ -0.69
PRPF8-216	ENST00000577001	LINC01619	G3V211	115 aa		10.72	□□□□□ -0.69
PRPF8-216	ENST00000577001	CRLF1	O75462	422 aa		10.72	□□□□□ -0.69
PRPF8-216	ENST00000577001	MED14OS	P0DP75	135 aa		10.72	□□□□□ -0.69
PRPF8-216	ENST00000577001	UBE2D3	P61077	147 aa		10.72	□□□□□ -0.69
PRPF8-216	ENST00000577001	UBE2D2	P62837	147 aa		10.72	□□□□□ -0.69
PRPF8-216	ENST00000577001	TTC32	Q5I0X7	151 aa		10.72	□□□□□ -0.69
PRPF8-216	ENST00000577001	PAPPA-AS1	Q5QFB9	102 aa		10.72	□□□□□ -0.69
PRPF8-216	ENST00000577001	STH	Q8IWL8	128 aa		10.72	□□□□□ -0.69
PRPF8-216	ENST00000577001		Q9H8V8	135 aa		10.72	□□□□□ -0.69
PRPF8-216	ENST00000577001	PDZD2	O15018	2839 aa		10.72	□□□□□ -0.69
PRPF8-216	ENST00000577001	DEFB4A	O15263	64 aa		10.71	□□□□□ -0.69
PRPF8-216	ENST00000577001	TMEM263	Q8WUH6	116 aa	Known RBP	10.71	□□□□□ -0.69
PRPF8-216	ENST00000577001	HIVEP1	P15822	2718 aa		10.71	□□□□□ -0.7
PRPF8-216	ENST00000577001		M0R2P5	195 aa		10.71	□□□□□ -0.7
PRPF8-216	ENST00000577001	PIK3CD-AS1	Q5SR53	167 aa		10.71	□□□□□ -0.7
PRPF8-216	ENST00000577001	RPL13A	P40429	203 aa	Known RBP	10.7	□□□□□ -0.7
PRPF8-216	ENST00000577001	TEN1	Q86WV5	123 aa		10.7	□□□□□ -0.7
PRPF8-216	ENST00000577001	CHCHD7	Q9BUK0	85 aa		10.7	□□□□□ -0.7
PRPF8-216	ENST00000577001		Q6YL49	198 aa		10.69	□□□□□ -0.7
PRPF8-216	ENST00000577001	TRGV2	A0A075B6R0	118 aa		10.69	□□□□□ -0.7
PRPF8-216	ENST00000577001	DEFB130B	P0DP73	79 aa		10.69	□□□□□ -0.7
PRPF8-216	ENST00000577001	DEFB130A	P0DP74	79 aa		10.69	□□□□□ -0.7
PRPF8-216	ENST00000577001	SMR3A	Q99954	134 aa		10.69	□□□□□ -0.7
PRPF8-216	ENST00000577001	CITED2	Q99967	270 aa	Predicted RBP	10.69	□□□□□ -0.7
PRPF8-216	ENST00000577001	GAGE6	Q13070	117 aa		10.69	□□□□□ -0.7
PRPF8-216	ENST00000577001	PPDPFL	Q8WWR9	84 aa		10.69	□□□□□ -0.7
PRPF8-216	ENST00000577001	TENM1	Q9UKZ4	2725 aa		10.68	□□□□□ -0.7
PRPF8-216	ENST00000577001	TRBV6-5	A0A0K0K1A5	114 aa		10.68	□□□□□ -0.7
PRPF8-216	ENST00000577001	ZNF415	Q09FC8	603 aa		10.68	□□□□□ -0.7
PRPF8-216	ENST00000577001	ODF3L2	Q3SX64	289 aa		10.68	□□□□□ -0.7
PRPF8-216	ENST00000577001	C2orf82	Q6UX34	121 aa		10.68	□□□□□ -0.7
PRPF8-216	ENST00000577001	RNF183	Q96D59	192 aa		10.68	□□□□□ -0.7
PRPF8-216	ENST00000577001	UBE2D4	Q9Y2X8	147 aa		10.68	□□□□□ -0.7
PRPF8-216	ENST00000577001	RHOH	Q15669	191 aa		10.68	□□□□□ -0.7
PRPF8-216	ENST00000577001	TRAV4	A0A0B4J268	109 aa		10.67	□□□□□ -0.7
PRPF8-216	ENST00000577001	DEFB114	Q30KQ6	69 aa		10.67	□□□□□ -0.7
PRPF8-216	ENST00000577001	LINC01620	Q4KN68	170 aa		10.67	□□□□□ -0.7
PRPF8-216	ENST00000577001		Q8N2B8	174 aa		10.66	□□□□□ -0.7
PRPF8-216	ENST00000577001	TMEM101	Q96IK0	257 aa		10.66	□□□□□ -0.7
PRPF8-216	ENST00000577001	SPATA25	Q9BR10	227 aa		10.66	□□□□□ -0.7
PRPF8-216	ENST00000577001	UNC79	Q9P2D8	2635 aa		10.66	□□□□□ -0.7
PRPF8-216	ENST00000577001	PFN2	P35080	140 aa		10.66	□□□□□ -0.7
PRPF8-216	ENST00000577001	IGHV1-58	A0A0C4DH39	117 aa		10.65	□□□□□ -0.7
PRPF8-216	ENST00000577001	PRIMA1	Q86XR5	153 aa		10.65	□□□□□ -0.7
PRPF8-216	ENST00000577001	C1orf158	Q8N1D5	194 aa		10.65	□□□□□ -0.7
PRPF8-216	ENST00000577001	VSIG2	Q96IQ7	327 aa		10.65	□□□□□ -0.7
PRPF8-216	ENST00000577001	TMEM89	A2RUT3	159 aa		10.64	□□□□□ -0.71
PRPF8-216	ENST00000577001	INS	P01308	110 aa		10.64	□□□□□ -0.71
PRPF8-216	ENST00000577001		Q9HAA7	133 aa		10.64	□□□□□ -0.71
PRPF8-216	ENST00000577001	ICOS	Q9Y6W8	199 aa		10.64	□□□□□ -0.71
PRPF8-216	ENST00000577001	C5orf38	Q86SI9	138 aa		10.64	□□□□□ -0.71
PRPF8-216	ENST00000577001		A0A096LNT2	108 aa		10.63	□□□□□ -0.71
PRPF8-216	ENST00000577001	NTM-AS1	Q6ZSK4	140 aa		10.63	□□□□□ -0.71
PRPF8-216	ENST00000577001	LITAF	Q99732	161 aa		10.63	□□□□□ -0.71
PRPF8-216	ENST00000577001	C11orf72	Q8NBR9	251 aa		10.62	□□□□□ -0.71
PRPF8-216	ENST00000577001	PEMT	Q9UBM1	199 aa		10.62	□□□□□ -0.71
PRPF8-216	ENST00000577001	OTOG	Q6ZRI0	2925 aa		10.62	□□□□□ -0.71
PRPF8-216	ENST00000577001	TRRAP	Q9Y4A5	3859 aa		10.62	□□□□□ -0.71
PRPF8-216	ENST00000577001	TRBV7-9	A0A0J9YWB2	115 aa		10.62	□□□□□ -0.71
PRPF8-216	ENST00000577001	CRYBA4	P53673	196 aa		10.62	□□□□□ -0.71
PRPF8-216	ENST00000577001	YAE1D1	Q9NRH1	226 aa		10.62	□□□□□ -0.71
PRPF8-216	ENST00000577001	SS18L2	Q9UHA2	77 aa		10.62	□□□□□ -0.71
PRPF8-216	ENST00000577001	CCL24	O00175	119 aa		10.62	□□□□□ -0.71
PRPF8-216	ENST00000577001	LYRM7	Q5U5X0	104 aa		10.62	□□□□□ -0.71
PRPF8-216	ENST00000577001	TMEM262	E9PQX1	116 aa		10.61	□□□□□ -0.71
PRPF8-216	ENST00000577001	ANAPC13	Q9BS18	74 aa		10.61	□□□□□ -0.71
PRPF8-216	ENST00000577001	DNAJC9-AS1	A6NH13	148 aa		10.6	□□□□□ -0.71
PRPF8-216	ENST00000577001	MRPS36	P82909	103 aa	Known RBP	10.6	□□□□□ -0.71
PRPF8-216	ENST00000577001	ATXN8	Q156A1	80 aa		10.6	□□□□□ -0.71
PRPF8-216	ENST00000577001	SOSTDC1	Q6X4U4	206 aa		10.6	□□□□□ -0.71
PRPF8-216	ENST00000577001	UBE2L6	O14933	153 aa		10.6	□□□□□ -0.71
PRPF8-216	ENST00000577001	DEFB113	Q30KQ7	82 aa		10.6	□□□□□ -0.71
PRPF8-216	ENST00000577001	LINC00242	Q5T6M2	205 aa		10.6	□□□□□ -0.71
PRPF8-216	ENST00000577001	CHCHD5	Q9BSY4	110 aa		10.6	□□□□□ -0.71
PRPF8-216	ENST00000577001		B5MCH6	92 aa		10.6	□□□□□ -0.71
PRPF8-216	ENST00000577001	TRGV4	A0A0C4DH28	118 aa		10.59	□□□□□ -0.71
PRPF8-216	ENST00000577001		H7C423	109 aa		10.59	□□□□□ -0.71
PRPF8-216	ENST00000577001	C15orf53	Q8NAA6	179 aa		10.59	□□□□□ -0.71
PRPF8-216	ENST00000577001	BRI3	O95415	125 aa		10.59	□□□□□ -0.71
PRPF8-216	ENST00000577001	TRAV8-4	A0A0B4J246	113 aa		10.59	□□□□□ -0.71
PRPF8-216	ENST00000577001	ATP5G1	P05496	136 aa		10.59	□□□□□ -0.71
PRPF8-216	ENST00000577001	RNASE1	P07998	156 aa	Known RBP	10.58	□□□□□ -0.72
PRPF8-216	ENST00000577001	TEX29	Q8N6K0	151 aa		10.58	□□□□□ -0.72
PRPF8-216	ENST00000577001	IGLV10-54	A0A075B6I4	117 aa		10.58	□□□□□ -0.72
PRPF8-216	ENST00000577001	SNCG	O76070	127 aa		10.58	□□□□□ -0.72
PRPF8-216	ENST00000577001	RPL32	P62910	135 aa	Known RBP	10.58	□□□□□ -0.72
PRPF8-216	ENST00000577001	PKD1L1	Q8TDX9	2849 aa		10.58	□□□□□ -0.72
PRPF8-216	ENST00000577001	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.57	□□□□□ -0.72
PRPF8-216	ENST00000577001		Q8N3U1	123 aa		10.57	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms