RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 TRBV7-3A0A075B6L6 115 aa4.03□□□□□ -1.76
NUP88-212ENST00000576708 KRTAP29-1A8MX34 341 aaPredicted RBP4.03□□□□□ -1.76
NUP88-212ENST00000576708 IGLV2-8P01709 118 aa4.03□□□□□ -1.76
NUP88-212ENST00000576708 RPS20P60866 119 aaKnown RBP4.03□□□□□ -1.76
NUP88-212ENST00000576708 RPL36AP83881 106 aaKnown RBP4.03□□□□□ -1.76
NUP88-212ENST00000576708 PNRC1Q12796 327 aaPredicted RBP4.03□□□□□ -1.76
NUP88-212ENST00000576708 ZNF56Q15929 161 aa4.03□□□□□ -1.76
NUP88-212ENST00000576708 MPV17L2Q567V2 206 aa4.03□□□□□ -1.76
NUP88-212ENST00000576708 C15orf54Q8N8G6 183 aa4.03□□□□□ -1.76
NUP88-212ENST00000576708 FAM213BQ8TBF2 198 aa4.03□□□□□ -1.76
NUP88-212ENST00000576708 RMI2Q96E14 147 aa4.03□□□□□ -1.76
NUP88-212ENST00000576708 CHAC1Q9BUX1 264 aa4.03□□□□□ -1.76
NUP88-212ENST00000576708 SS18L2Q9UHA2 77 aa4.03□□□□□ -1.76
NUP88-212ENST00000576708 TRBV6-8A0A0A6YYG3 113 aa4.02□□□□□ -1.77
NUP88-212ENST00000576708 TGIF2-C20orf24A0A0A6YYL0 155 aa4.02□□□□□ -1.77
NUP88-212ENST00000576708 TRBV10-1A0A0K0K1A3 114 aa4.02□□□□□ -1.77
NUP88-212ENST00000576708 ANGP03950 147 aaKnown RBP4.02□□□□□ -1.77
NUP88-212ENST00000576708 GAGE6Q13070 117 aa4.02□□□□□ -1.77
NUP88-212ENST00000576708 ELOBQ15370 118 aa4.02□□□□□ -1.77
NUP88-212ENST00000576708 CLPSL2Q6UWE3 100 aa4.02□□□□□ -1.77
NUP88-212ENST00000576708 NTM-AS1Q6ZSK4 140 aa4.02□□□□□ -1.77
NUP88-212ENST00000576708 OR10G8Q8NGN5 311 aa4.02□□□□□ -1.77
NUP88-212ENST00000576708 DEFB104AQ8WTQ1 72 aa4.02□□□□□ -1.77
NUP88-212ENST00000576708 SFT2D1Q8WV19 159 aa4.02□□□□□ -1.77
NUP88-212ENST00000576708 CHCHD5Q9BSY4 110 aa4.02□□□□□ -1.77
NUP88-212ENST00000576708 PANO1I0J062 215 aa4.01□□□□□ -1.77
NUP88-212ENST00000576708 IFNA1P01562 189 aa4.01□□□□□ -1.77
NUP88-212ENST00000576708 HLA-DQA1P01909 254 aa4.01□□□□□ -1.77
NUP88-212ENST00000576708 PRSS1P07477 247 aa4.01□□□□□ -1.77
NUP88-212ENST00000576708 SEC11BP0C7V7 166 aa4.01□□□□□ -1.77
NUP88-212ENST00000576708 GZMBP10144 247 aa4.01□□□□□ -1.77
NUP88-212ENST00000576708 HNRNPA3P51991 378 aaKnown RBP4.01□□□□□ -1.77
NUP88-212ENST00000576708 CCL20P78556 96 aa4.01□□□□□ -1.77
NUP88-212ENST00000576708 SPANXN1Q5VSR9 72 aa4.01□□□□□ -1.77
NUP88-212ENST00000576708 KRTAP26-1Q6PEX3 210 aa4.01□□□□□ -1.77
NUP88-212ENST00000576708 FAM19A5Q7Z5A7 132 aaPredicted RBP4.01□□□□□ -1.77
NUP88-212ENST00000576708 BAGE2Q86Y30 109 aa4.01□□□□□ -1.77
NUP88-212ENST00000576708 KCNRGQ8N5I3 272 aa4.01□□□□□ -1.77
NUP88-212ENST00000576708 MBD3L1Q8WWY6 194 aa4.01□□□□□ -1.77
NUP88-212ENST00000576708 CHCHD7Q9BUK0 85 aa4.01□□□□□ -1.77
NUP88-212ENST00000576708 ZNF471Q9BX82 626 aaPredicted RBP4.01□□□□□ -1.77
NUP88-212ENST00000576708 KIF25-AS1Q9Y6Z4 181 aa4.01□□□□□ -1.77
NUP88-212ENST00000576708 PDE6DO43924 150 aa4□□□□□ -1.77
NUP88-212ENST00000576708 CRPP02741 224 aa4□□□□□ -1.77
NUP88-212ENST00000576708 DDTP30046 118 aa4□□□□□ -1.77
NUP88-212ENST00000576708 CKS1BP61024 79 aa4□□□□□ -1.77
NUP88-212ENST00000576708 Q0VG73 95 aa4□□□□□ -1.77
NUP88-212ENST00000576708 GAGE2BQ13066 116 aa4□□□□□ -1.77
NUP88-212ENST00000576708 GAGE2EQ4V326 116 aa4□□□□□ -1.77
NUP88-212ENST00000576708 FAM74A3Q4VXF1 159 aa4□□□□□ -1.77
NUP88-212ENST00000576708 TMEM97Q5BJF2 176 aa4□□□□□ -1.77
NUP88-212ENST00000576708 KRTAP5-6Q6L8G9 129 aaPredicted RBP4□□□□□ -1.77
NUP88-212ENST00000576708 GAGE2AQ6NT46 116 aa4□□□□□ -1.77
NUP88-212ENST00000576708 TMUB2Q71RG4 321 aa4□□□□□ -1.77
NUP88-212ENST00000576708 LINC00269Q8N2A0 174 aa4□□□□□ -1.77
NUP88-212ENST00000576708 DERL1Q9BUN8 251 aa4□□□□□ -1.77
NUP88-212ENST00000576708 PPDPFQ9H3Y8 114 aa4□□□□□ -1.77
NUP88-212ENST00000576708 SPANXB1Q9NS25 103 aaPredicted RBP4□□□□□ -1.77
NUP88-212ENST00000576708 GAGE2DQ9UEU5 116 aa4□□□□□ -1.77
NUP88-212ENST00000576708 IGLV10-54A0A075B6I4 117 aa3.99□□□□□ -1.77
NUP88-212ENST00000576708 A0A1B0GUV1 79 aa3.99□□□□□ -1.77
NUP88-212ENST00000576708 IFITM10A6NMD0 228 aa3.99□□□□□ -1.77
NUP88-212ENST00000576708 MGPP08493 103 aa3.99□□□□□ -1.77
NUP88-212ENST00000576708 CXCL1P09341 107 aa3.99□□□□□ -1.77
NUP88-212ENST00000576708 OR5AL1P0C617 328 aa3.99□□□□□ -1.77
NUP88-212ENST00000576708 SULT1A2P50226 295 aa3.99□□□□□ -1.77
NUP88-212ENST00000576708 GFRA4Q9GZZ7 299 aa3.99□□□□□ -1.77
NUP88-212ENST00000576708 UBR4Q5T4S7 5183 aa3.99□□□□□ -1.77
NUP88-212ENST00000576708 IGLV4-60A0A075B6I1 120 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 KANTRA0A1W2PQU2 76 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 FAM231BA6NCW3 169 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 UMAD1C9J7I0 102 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 M0QY20 66 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 BCL2L11O43521 198 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 SCO1O75880 301 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 ATP5LO75964 103 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 SMIM17P0DL12 118 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 RAB5CP51148 216 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 RPL37AP61513 92 aaKnown RBP3.98□□□□□ -1.77
NUP88-212ENST00000576708 PKIAP61925 76 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 MIAQ16674 131 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 C4orf26Q17RF5 130 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 C14orf177Q52M58 125 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 CENPWQ5EE01 88 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 C9orf163Q8N9P6 203 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 SIGMAR1Q99720 223 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 MAP1LC3AQ9H492 121 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 SPANXA1Q9NS26 97 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 PRR34Q9NV39 138 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 GNG13Q9P2W3 67 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 VAX2Q9UIW0 290 aa3.98□□□□□ -1.77
NUP88-212ENST00000576708 TRBV25-1A0A075B6N4 114 aa3.97□□□□□ -1.77
NUP88-212ENST00000576708 IGHV1-24A0A0C4DH33 117 aa3.97□□□□□ -1.77
NUP88-212ENST00000576708 A0A0D9SG52 128 aa3.97□□□□□ -1.77
NUP88-212ENST00000576708 LINC00862A6NCI5 91 aa3.97□□□□□ -1.77
NUP88-212ENST00000576708 IGLC6P0CF74 106 aa3.97□□□□□ -1.77
NUP88-212ENST00000576708 CHTF8P0CG12 524 aa3.97□□□□□ -1.77
NUP88-212ENST00000576708 CD164Q04900 197 aa3.97□□□□□ -1.77
NUP88-212ENST00000576708 REG3AQ06141 175 aa3.97□□□□□ -1.77
NUP88-212ENST00000576708 ZNF345Q14585 488 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms