RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, human

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC4-208	ENST00000576348		Q6ZUT4	128 aa		11.29	□□□□□ -0.6
ERCC4-208	ENST00000576348	LINC00173	Q6ZV60	143 aa		11.29	□□□□□ -0.6
ERCC4-208	ENST00000576348	ZNF664	Q8N3J9	261 aa		11.29	□□□□□ -0.6
ERCC4-208	ENST00000576348		Q8N976	141 aa		11.29	□□□□□ -0.6
ERCC4-208	ENST00000576348	CSDC2	Q9Y534	153 aa	Known RBP	11.29	□□□□□ -0.6
ERCC4-208	ENST00000576348	IGLV4-3	A0A075B6K6	122 aa		11.28	□□□□□ -0.6
ERCC4-208	ENST00000576348		A0A1B0GUV1	79 aa		11.28	□□□□□ -0.6
ERCC4-208	ENST00000576348	SIVA1	O15304	175 aa		11.28	□□□□□ -0.6
ERCC4-208	ENST00000576348	ANG	P03950	147 aa	Known RBP	11.28	□□□□□ -0.6
ERCC4-208	ENST00000576348	MRPS36	P82909	103 aa	Known RBP	11.28	□□□□□ -0.6
ERCC4-208	ENST00000576348	TEX43	Q6ZNM6	134 aa		11.28	□□□□□ -0.6
ERCC4-208	ENST00000576348	OPRPN	Q99935	248 aa	Predicted RBP	11.28	□□□□□ -0.6
ERCC4-208	ENST00000576348	C2orf88	Q9BSF0	95 aa		11.28	□□□□□ -0.6
ERCC4-208	ENST00000576348	IFITM10	A6NMD0	228 aa		11.27	□□□□□ -0.61
ERCC4-208	ENST00000576348	RNASE13	Q5GAN3	156 aa	Known RBP	11.27	□□□□□ -0.61
ERCC4-208	ENST00000576348	OR10D4P	Q8NGN7	298 aa		11.27	□□□□□ -0.61
ERCC4-208	ENST00000576348	UPK3B	Q9BT76	320 aa		11.27	□□□□□ -0.61
ERCC4-208	ENST00000576348	IGLV4-60	A0A075B6I1	120 aa		11.26	□□□□□ -0.61
ERCC4-208	ENST00000576348	LINC01556	Q5JQF7	62 aa		11.26	□□□□□ -0.61
ERCC4-208	ENST00000576348	CDC42SE2	Q9NRR3	84 aa		11.26	□□□□□ -0.61
ERCC4-208	ENST00000576348	IGKV3OR2-268	A0A0C4DH90	116 aa		11.25	□□□□□ -0.61
ERCC4-208	ENST00000576348	C20orf202	A1L168	122 aa		11.25	□□□□□ -0.61
ERCC4-208	ENST00000576348	CRP	P02741	224 aa		11.25	□□□□□ -0.61
ERCC4-208	ENST00000576348	PMVK	Q15126	192 aa		11.25	□□□□□ -0.61
ERCC4-208	ENST00000576348		Q8N3U1	123 aa		11.25	□□□□□ -0.61
ERCC4-208	ENST00000576348	BAALC	Q8WXS3	180 aa		11.25	□□□□□ -0.61
ERCC4-208	ENST00000576348	TRAV9-2	A0A087WT02	112 aa		11.24	□□□□□ -0.61
ERCC4-208	ENST00000576348	C3orf79	P0CE67	100 aa		11.24	□□□□□ -0.61
ERCC4-208	ENST00000576348	DNAH10OS	P0CZ25	163 aa		11.24	□□□□□ -0.61
ERCC4-208	ENST00000576348	AKR1D1	P51857	326 aa		11.24	□□□□□ -0.61
ERCC4-208	ENST00000576348		Q9H8V8	135 aa		11.24	□□□□□ -0.61
ERCC4-208	ENST00000576348	KLK12	Q9UKR0	248 aa		11.24	□□□□□ -0.61
ERCC4-208	ENST00000576348	SYS1-DBNDD2	H3BUS1	97 aa		11.23	□□□□□ -0.61
ERCC4-208	ENST00000576348	ZC2HC1B	Q5TFG8	222 aa		11.23	□□□□□ -0.61
ERCC4-208	ENST00000576348	CLPSL2	Q6UWE3	100 aa		11.23	□□□□□ -0.61
ERCC4-208	ENST00000576348	PET117	Q6UWS5	81 aa		11.23	□□□□□ -0.61
ERCC4-208	ENST00000576348	LINC00269	Q8N2A0	174 aa		11.23	□□□□□ -0.61
ERCC4-208	ENST00000576348	TRAV13-1	A0A0B4J241	112 aa		11.22	□□□□□ -0.61
ERCC4-208	ENST00000576348	PRSS29P	A6NIE9	313 aa		11.22	□□□□□ -0.61
ERCC4-208	ENST00000576348	C10orf126	Q8N4M7	172 aa		11.22	□□□□□ -0.61
ERCC4-208	ENST00000576348	CST9L	Q9H4G1	147 aa		11.22	□□□□□ -0.61
ERCC4-208	ENST00000576348	TRAV12-1	A0A0B4J245	112 aa		11.21	□□□□□ -0.61
ERCC4-208	ENST00000576348	REG3A	Q06141	175 aa		11.21	□□□□□ -0.61
ERCC4-208	ENST00000576348	LGALS9C	Q6DKI2	356 aa		11.21	□□□□□ -0.61
ERCC4-208	ENST00000576348	UBE2W	Q96B02	151 aa		11.21	□□□□□ -0.61
ERCC4-208	ENST00000576348	AMELX	Q99217	191 aa		11.21	□□□□□ -0.61
ERCC4-208	ENST00000576348	CHTOP	Q9Y3Y2	248 aa	Known RBP	11.21	□□□□□ -0.61
ERCC4-208	ENST00000576348	LY6G6C	O95867	125 aa		11.2	□□□□□ -0.62
ERCC4-208	ENST00000576348	SS18	Q15532	418 aa		11.2	□□□□□ -0.62
ERCC4-208	ENST00000576348	SCGB1D1	O95968	90 aa		11.19	□□□□□ -0.62
ERCC4-208	ENST00000576348		K7EP13	123 aa		11.18	□□□□□ -0.62
ERCC4-208	ENST00000576348	SEC11A	P67812	179 aa		11.18	□□□□□ -0.62
ERCC4-208	ENST00000576348	TTC32	Q5I0X7	151 aa		11.18	□□□□□ -0.62
ERCC4-208	ENST00000576348	SPATA12	Q7Z6I5	190 aa		11.18	□□□□□ -0.62
ERCC4-208	ENST00000576348	FAM104A	Q969W3	186 aa		11.18	□□□□□ -0.62
ERCC4-208	ENST00000576348	GEMIN7	Q9H840	131 aa	Known RBP	11.18	□□□□□ -0.62
ERCC4-208	ENST00000576348		F8VRH5	84 aa		11.17	□□□□□ -0.62
ERCC4-208	ENST00000576348	ODF1	Q14990	250 aa		11.17	□□□□□ -0.62
ERCC4-208	ENST00000576348	PMCHL2	Q9BQD1	86 aa		11.17	□□□□□ -0.62
ERCC4-208	ENST00000576348	MRPL35	Q9NZE8	188 aa	Known RBP	11.17	□□□□□ -0.62
ERCC4-208	ENST00000576348		A0A0J9YXV3	536 aa		11.16	□□□□□ -0.62
ERCC4-208	ENST00000576348	LINC00959	A0A1B0GUT2	108 aa		11.16	□□□□□ -0.62
ERCC4-208	ENST00000576348	DPM2	O94777	84 aa		11.16	□□□□□ -0.62
ERCC4-208	ENST00000576348	PLN	P26678	52 aa		11.16	□□□□□ -0.62
ERCC4-208	ENST00000576348	UBE2D1	P51668	147 aa		11.16	□□□□□ -0.62
ERCC4-208	ENST00000576348	MIA	Q16674	131 aa		11.16	□□□□□ -0.62
ERCC4-208	ENST00000576348	LINC01545	Q5VT33	79 aa		11.16	□□□□□ -0.62
ERCC4-208	ENST00000576348		Q9HAA7	133 aa		11.16	□□□□□ -0.62
ERCC4-208	ENST00000576348	TRAV8-3	A0A0A6YYJ7	113 aa		11.15	□□□□□ -0.62
ERCC4-208	ENST00000576348	CCL25	O15444	150 aa		11.15	□□□□□ -0.62
ERCC4-208	ENST00000576348	LINC00476	Q8WZB0	136 aa		11.15	□□□□□ -0.62
ERCC4-208	ENST00000576348	RMI2	Q96E14	147 aa		11.15	□□□□□ -0.62
ERCC4-208	ENST00000576348	CHAC1	Q9BUX1	264 aa		11.15	□□□□□ -0.62
ERCC4-208	ENST00000576348	PRR34	Q9NV39	138 aa		11.15	□□□□□ -0.62
ERCC4-208	ENST00000576348	DNAH7	Q8WXX0	4024 aa		11.14	□□□□□ -0.63
ERCC4-208	ENST00000576348	IGLV10-54	A0A075B6I4	117 aa		11.14	□□□□□ -0.63
ERCC4-208	ENST00000576348	TRAV8-4	A0A0B4J246	113 aa		11.14	□□□□□ -0.63
ERCC4-208	ENST00000576348	NBDY	A0A0U1RRE5	68 aa		11.14	□□□□□ -0.63
ERCC4-208	ENST00000576348	LOC105371267	A0A1B0GV96	52 aa		11.14	□□□□□ -0.63
ERCC4-208	ENST00000576348	IBA57-AS1	B1ANH7	110 aa		11.14	□□□□□ -0.63
ERCC4-208	ENST00000576348	IGKC	P01834	107 aa		11.14	□□□□□ -0.63
ERCC4-208	ENST00000576348	XCL1	P47992	114 aa		11.14	□□□□□ -0.63
ERCC4-208	ENST00000576348	ENHO	Q6UWT2	76 aa		11.14	□□□□□ -0.63
ERCC4-208	ENST00000576348	C1orf43	Q9BWL3	253 aa		11.14	□□□□□ -0.63
ERCC4-208	ENST00000576348	TINCR	A0A1B0GVN0	87 aa		11.13	□□□□□ -0.63
ERCC4-208	ENST00000576348	IGLC3	P0DOY3	106 aa		11.13	□□□□□ -0.63
ERCC4-208	ENST00000576348	HERVK_113	P63121	156 aa		11.13	□□□□□ -0.63
ERCC4-208	ENST00000576348	LINC00469	Q8N7U9	141 aa		11.13	□□□□□ -0.63
ERCC4-208	ENST00000576348	IGKV2D-24	A0A075B6R9	120 aa		11.12	□□□□□ -0.63
ERCC4-208	ENST00000576348	JOSD1	Q15040	202 aa	Predicted RBP	11.12	□□□□□ -0.63
ERCC4-208	ENST00000576348	TMEM170B	Q5T4T1	132 aa		11.12	□□□□□ -0.63
ERCC4-208	ENST00000576348	LINC00242	Q5T6M2	205 aa		11.12	□□□□□ -0.63
ERCC4-208	ENST00000576348	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.12	□□□□□ -0.63
ERCC4-208	ENST00000576348	TENM2	Q9NT68	2774 aa		11.12	□□□□□ -0.63
ERCC4-208	ENST00000576348	DYNC2H1	Q8NCM8	4307 aa	Known RBP	11.11	□□□□□ -0.63
ERCC4-208	ENST00000576348	IGLV4-69	A0A075B6H9	119 aa		11.11	□□□□□ -0.63
ERCC4-208	ENST00000576348		H3BRM9	83 aa		11.11	□□□□□ -0.63
ERCC4-208	ENST00000576348		M0R2N4	97 aa		11.11	□□□□□ -0.63
ERCC4-208	ENST00000576348	GAGE12H	A6NDE8	117 aa		11.1	□□□□□ -0.63
ERCC4-208	ENST00000576348	C11orf86	A6NJI1	115 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms