RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 FOXA3P55318 350 aaPredicted RBP3.12□□□□□ -1.91
PRPF8-211ENST00000574728 RAB4BP61018 213 aa3.12□□□□□ -1.91
PRPF8-211ENST00000574728 SOHLH1Q5JUK2 328 aa3.12□□□□□ -1.91
PRPF8-211ENST00000574728 FAM74A4Q5TZK3 123 aa3.12□□□□□ -1.91
PRPF8-211ENST00000574728 LYZL1Q6UWQ5 148 aa3.12□□□□□ -1.91
PRPF8-211ENST00000574728 LINC01551Q86U37 167 aa3.12□□□□□ -1.91
PRPF8-211ENST00000574728 NIT1Q86X76 327 aa3.12□□□□□ -1.91
PRPF8-211ENST00000574728 LY96Q9Y6Y9 160 aa3.12□□□□□ -1.91
PRPF8-211ENST00000574728 TRBV7-3A0A075B6L6 115 aa3.11□□□□□ -1.91
PRPF8-211ENST00000574728 P01737 135 aa3.11□□□□□ -1.91
PRPF8-211ENST00000574728 NTF3P20783 257 aa3.11□□□□□ -1.91
PRPF8-211ENST00000574728 RPS20P60866 119 aaKnown RBP3.11□□□□□ -1.91
PRPF8-211ENST00000574728 IFITM2Q01629 132 aa3.11□□□□□ -1.91
PRPF8-211ENST00000574728 KRTAP26-1Q6PEX3 210 aa3.11□□□□□ -1.91
PRPF8-211ENST00000574728 ATRAIDQ6UW56 229 aa3.11□□□□□ -1.91
PRPF8-211ENST00000574728 SPATA12Q7Z6I5 190 aa3.11□□□□□ -1.91
PRPF8-211ENST00000574728 DAZ4Q86SG3 579 aaKnown RBP3.11□□□□□ -1.91
PRPF8-211ENST00000574728 TPPP3Q9BW30 176 aa3.11□□□□□ -1.91
PRPF8-211ENST00000574728 RPP21Q9H633 154 aaKnown RBP3.11□□□□□ -1.91
PRPF8-211ENST00000574728 DAZ3Q9NR90 486 aaKnown RBP3.11□□□□□ -1.91
PRPF8-211ENST00000574728 V9GYV3 84 aa3.11□□□□□ -1.91
PRPF8-211ENST00000574728 HMCN2Q8NDA2 5059 aa3.11□□□□□ -1.91
PRPF8-211ENST00000574728 A0A087WWC5 75 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 TRBV6-8A0A0A6YYG3 113 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 TRAV8-6A0A0B4J262 113 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 F2Z2F3 143 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 IGHV3-30P01768 117 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 IGHV3-33P01772 117 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 IGHV3-30-3P0DP02 117 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 IGHV3-30-5P0DP03 117 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 KRTAP10-1P60331 282 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 RPL23P62829 140 aaKnown RBP3.1□□□□□ -1.91
PRPF8-211ENST00000574728 CACNG7P62955 275 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 LAGE3Q14657 143 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 OR10J3Q5JRS4 329 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 LINC00242Q5T6M2 205 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 SPANXN1Q5VSR9 72 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 ENHOQ6UWT2 76 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 C10orf126Q8N4M7 172 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 GATD1Q8NB37 220 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 TYMSOSQ8TAI1 123 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 ISOC2Q96AB3 205 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 AP1S3Q96PC3 154 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 SMIM7Q9BQ49 75 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 OSTCQ9NRP0 149 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 DHRS4-AS1Q9P1J3 65 aa3.1□□□□□ -1.91
PRPF8-211ENST00000574728 TRAV9-2A0A087WT02 112 aa3.09□□□□□ -1.91
PRPF8-211ENST00000574728 TRAV26-2A0A0B4J265 109 aa3.09□□□□□ -1.91
PRPF8-211ENST00000574728 A0A0U1RRA0 63 aa3.09□□□□□ -1.91
PRPF8-211ENST00000574728 C16orf90A8MZG2 172 aa3.09□□□□□ -1.91
PRPF8-211ENST00000574728 GATCO43716 136 aaKnown RBP3.09□□□□□ -1.91
PRPF8-211ENST00000574728 ZNF56Q15929 161 aa3.09□□□□□ -1.91
PRPF8-211ENST00000574728 IQCJQ1A5X6 159 aa3.09□□□□□ -1.91
PRPF8-211ENST00000574728 Q1RN00 199 aa3.09□□□□□ -1.91
PRPF8-211ENST00000574728 MPV17L2Q567V2 206 aa3.09□□□□□ -1.91
PRPF8-211ENST00000574728 TSKUQ8WUA8 353 aa3.09□□□□□ -1.91
PRPF8-211ENST00000574728 RNF185Q96GF1 192 aa3.09□□□□□ -1.91
PRPF8-211ENST00000574728 EIF5A2Q9GZV4 153 aaKnown RBP3.09□□□□□ -1.91
PRPF8-211ENST00000574728 BIN3Q9NQY0 253 aa3.09□□□□□ -1.91
PRPF8-211ENST00000574728 PRR34Q9NV39 138 aa3.09□□□□□ -1.91
PRPF8-211ENST00000574728 DMBT1Q9UGM3 2413 aaPredicted RBP3.08□□□□□ -1.92
PRPF8-211ENST00000574728 SMIM27A0A1W2PRY6 76 aa3.08□□□□□ -1.92
PRPF8-211ENST00000574728 FAM231BA6NCW3 169 aa3.08□□□□□ -1.92
PRPF8-211ENST00000574728 ZNF727A8MUV8 499 aa3.08□□□□□ -1.92
PRPF8-211ENST00000574728 HIGD1CA8MV81 97 aa3.08□□□□□ -1.92
PRPF8-211ENST00000574728 A8MWL6 223 aa3.08□□□□□ -1.92
PRPF8-211ENST00000574728 RPS10P46783 165 aaKnown RBP3.08□□□□□ -1.92
PRPF8-211ENST00000574728 RAB14P61106 215 aa3.08□□□□□ -1.92
PRPF8-211ENST00000574728 RBX1P62877 108 aa3.08□□□□□ -1.92
PRPF8-211ENST00000574728 S100A12P80511 92 aa3.08□□□□□ -1.92
PRPF8-211ENST00000574728 TMEM241Q24JQ0 296 aa3.08□□□□□ -1.92
PRPF8-211ENST00000574728 FAM74A3Q4VXF1 159 aa3.08□□□□□ -1.92
PRPF8-211ENST00000574728 RASL11AQ6T310 242 aa3.08□□□□□ -1.92
PRPF8-211ENST00000574728 Q8N976 141 aa3.08□□□□□ -1.92
PRPF8-211ENST00000574728 NUP35Q8NFH5 326 aa3.08□□□□□ -1.92
PRPF8-211ENST00000574728 RPL39LQ96EH5 51 aaKnown RBP3.08□□□□□ -1.92
PRPF8-211ENST00000574728 PGLYRP4Q96LB8 373 aa3.08□□□□□ -1.92
PRPF8-211ENST00000574728 CHCHD7Q9BUK0 85 aa3.08□□□□□ -1.92
PRPF8-211ENST00000574728 DPH3P1Q9H4G8 78 aa3.08□□□□□ -1.92
PRPF8-211ENST00000574728 SMDT1Q9H4I9 107 aa3.08□□□□□ -1.92
PRPF8-211ENST00000574728 NIT2Q9NQR4 276 aa3.08□□□□□ -1.92
PRPF8-211ENST00000574728 FLG2Q5D862 2391 aaPredicted RBP3.07□□□□□ -1.92
PRPF8-211ENST00000574728 IGLV4-60A0A075B6I1 120 aa3.07□□□□□ -1.92
PRPF8-211ENST00000574728 TRBV6-5A0A0K0K1A5 114 aa3.07□□□□□ -1.92
PRPF8-211ENST00000574728 A0A1B0GUT8 65 aa3.07□□□□□ -1.92
PRPF8-211ENST00000574728 A0A1B0GXF2 115 aa3.07□□□□□ -1.92
PRPF8-211ENST00000574728 F8WDY8 70 aa3.07□□□□□ -1.92
PRPF8-211ENST00000574728 MGPP08493 103 aa3.07□□□□□ -1.92
PRPF8-211ENST00000574728 TRGC1P0CF51 173 aa3.07□□□□□ -1.92
PRPF8-211ENST00000574728 RAB4AP20338 218 aa3.07□□□□□ -1.92
PRPF8-211ENST00000574728 S100A1P23297 94 aa3.07□□□□□ -1.92
PRPF8-211ENST00000574728 CEBPGP53567 150 aa3.07□□□□□ -1.92
PRPF8-211ENST00000574728 POLR2KP53803 58 aaKnown RBP3.07□□□□□ -1.92
PRPF8-211ENST00000574728 KRTAP10-5P60370 271 aa3.07□□□□□ -1.92
PRPF8-211ENST00000574728 CLLU1Q5K131 121 aa3.07□□□□□ -1.92
PRPF8-211ENST00000574728 Q6ZSA8 131 aa3.07□□□□□ -1.92
PRPF8-211ENST00000574728 Q8N814 137 aa3.07□□□□□ -1.92
PRPF8-211ENST00000574728 C20orf203Q8NBC4 194 aa3.07□□□□□ -1.92
PRPF8-211ENST00000574728 DEFB104AQ8WTQ1 72 aa3.07□□□□□ -1.92
PRPF8-211ENST00000574728 FRZBQ92765 325 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms