RNA–Protein interactions for RNA: ENST00000574662.1

SMPD3-212, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-212ENST00000574662 MEGF8Q7Z7M0 2845 aa11.42□□□□□ -0.58
SMPD3-212ENST00000574662 TSPAN13O95857 204 aa11.42□□□□□ -0.58
SMPD3-212ENST00000574662 EMP1P54849 157 aa11.42□□□□□ -0.58
SMPD3-212ENST00000574662 SLC25A29Q8N8R3 303 aa11.42□□□□□ -0.58
SMPD3-212ENST00000574662 ZNRF2Q8NHG8 242 aa11.42□□□□□ -0.58
SMPD3-212ENST00000574662 SCGB1A1P11684 91 aa11.41□□□□□ -0.58
SMPD3-212ENST00000574662 RNF183Q96D59 192 aa11.41□□□□□ -0.58
SMPD3-212ENST00000574662 LINC00467Q9BRT7 94 aa11.41□□□□□ -0.58
SMPD3-212ENST00000574662 RETNQ9HD89 108 aa11.41□□□□□ -0.58
SMPD3-212ENST00000574662 X6R8D5 127 aa11.41□□□□□ -0.58
SMPD3-212ENST00000574662 IGHV3-30P01768 117 aa11.41□□□□□ -0.58
SMPD3-212ENST00000574662 IGHV3-30-5P0DP03 117 aa11.41□□□□□ -0.58
SMPD3-212ENST00000574662 TSPEAR-AS2P59090 65 aa11.41□□□□□ -0.58
SMPD3-212ENST00000574662 UBE2D3P61077 147 aa11.41□□□□□ -0.58
SMPD3-212ENST00000574662 UBE2D2P62837 147 aa11.41□□□□□ -0.58
SMPD3-212ENST00000574662 OVOL2Q9BRP0 275 aa11.41□□□□□ -0.58
SMPD3-212ENST00000574662 TMEM223A0PJW6 202 aa11.4□□□□□ -0.58
SMPD3-212ENST00000574662 ETDBQ3ZM63 59 aa11.4□□□□□ -0.58
SMPD3-212ENST00000574662 CRYBA4P53673 196 aa11.39□□□□□ -0.59
SMPD3-212ENST00000574662 PIK3CD-AS1Q5SR53 167 aa11.39□□□□□ -0.59
SMPD3-212ENST00000574662 AMELXQ99217 191 aa11.39□□□□□ -0.59
SMPD3-212ENST00000574662 TRBV20-1A0A075B6N2 111 aa11.39□□□□□ -0.59
SMPD3-212ENST00000574662 APOMO95445 188 aa11.39□□□□□ -0.59
SMPD3-212ENST00000574662 P0DMU3 169 aa11.39□□□□□ -0.59
SMPD3-212ENST00000574662 FAM231AP0DMU4 169 aa11.39□□□□□ -0.59
SMPD3-212ENST00000574662 FAM231CP0DMU5 169 aa11.39□□□□□ -0.59
SMPD3-212ENST00000574662 CFAP126Q5VTH2 177 aa11.39□□□□□ -0.59
SMPD3-212ENST00000574662 SPATA25Q9BR10 227 aa11.39□□□□□ -0.59
SMPD3-212ENST00000574662 PYGO1Q9Y3Y4 419 aa11.39□□□□□ -0.59
SMPD3-212ENST00000574662 C11orf72Q8NBR9 251 aa11.38□□□□□ -0.59
SMPD3-212ENST00000574662 SIGMAR1Q99720 223 aa11.38□□□□□ -0.59
SMPD3-212ENST00000574662 VCX2Q9H322 139 aa11.38□□□□□ -0.59
SMPD3-212ENST00000574662 IGLV4-3A0A075B6K6 122 aa11.37□□□□□ -0.59
SMPD3-212ENST00000574662 LOC107984156A0A0G2JMH3 177 aa11.37□□□□□ -0.59
SMPD3-212ENST00000574662 GAGE12HA6NDE8 117 aa11.37□□□□□ -0.59
SMPD3-212ENST00000574662 RHODO00212 210 aa11.37□□□□□ -0.59
SMPD3-212ENST00000574662 ZNF22P17026 224 aaPredicted RBP11.37□□□□□ -0.59
SMPD3-212ENST00000574662 SH2D6Q7Z4S9 175 aa11.37□□□□□ -0.59
SMPD3-212ENST00000574662 ARL17AQ8IVW1 177 aa11.37□□□□□ -0.59
SMPD3-212ENST00000574662 C10orf126Q8N4M7 172 aa11.37□□□□□ -0.59
SMPD3-212ENST00000574662 DEFB104AQ8WTQ1 72 aa11.37□□□□□ -0.59
SMPD3-212ENST00000574662 PTH2Q96A98 100 aa11.37□□□□□ -0.59
SMPD3-212ENST00000574662 PLAC8L1A1L4L8 177 aa11.36□□□□□ -0.59
SMPD3-212ENST00000574662 A8MWV9 139 aa11.36□□□□□ -0.59
SMPD3-212ENST00000574662 TMEM238C9JI98 176 aa11.36□□□□□ -0.59
SMPD3-212ENST00000574662 PSMB2P49721 201 aa11.36□□□□□ -0.59
SMPD3-212ENST00000574662 ZNF415Q09FC8 603 aa11.36□□□□□ -0.59
SMPD3-212ENST00000574662 CFC1BP0CG36 223 aa11.35□□□□□ -0.59
SMPD3-212ENST00000574662 CFC1P0CG37 223 aa11.35□□□□□ -0.59
SMPD3-212ENST00000574662 TMEM263Q8WUH6 116 aaKnown RBP11.35□□□□□ -0.59
SMPD3-212ENST00000574662 TM2D3Q9BRN9 247 aa11.35□□□□□ -0.59
SMPD3-212ENST00000574662 PRO1854Q9UHT4 67 aa11.35□□□□□ -0.59
SMPD3-212ENST00000574662 SMIM9A6NGZ8 99 aa11.34□□□□□ -0.59
SMPD3-212ENST00000574662 M0R2P5 195 aa11.34□□□□□ -0.59
SMPD3-212ENST00000574662 DEFB4AO15263 64 aa11.34□□□□□ -0.59
SMPD3-212ENST00000574662 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.33□□□□□ -0.59
SMPD3-212ENST00000574662 A0A0B4J2C4 111 aa11.33□□□□□ -0.59
SMPD3-212ENST00000574662 IGHV4-28A0A0C4DH34 117 aa11.33□□□□□ -0.59
SMPD3-212ENST00000574662 MTURNQ8N3F0 131 aa11.33□□□□□ -0.59
SMPD3-212ENST00000574662 Q8NAQ8 132 aa11.33□□□□□ -0.59
SMPD3-212ENST00000574662 OPRPNQ99935 248 aaPredicted RBP11.33□□□□□ -0.59
SMPD3-212ENST00000574662 B9D2Q9BPU9 175 aa11.33□□□□□ -0.59
SMPD3-212ENST00000574662 TENM3Q9P273 2699 aa11.33□□□□□ -0.6
SMPD3-212ENST00000574662 DNAH9Q9NYC9 4486 aa11.33□□□□□ -0.6
SMPD3-212ENST00000574662 FOXI1Q12951 378 aa11.33□□□□□ -0.6
SMPD3-212ENST00000574662 IL17DQ8TAD2 202 aa11.33□□□□□ -0.6
SMPD3-212ENST00000574662 C16orf74Q96GX8 76 aa11.33□□□□□ -0.6
SMPD3-212ENST00000574662 TNFRSF18Q9Y5U5 241 aa11.33□□□□□ -0.6
SMPD3-212ENST00000574662 A0A0J9YXV3 536 aa11.32□□□□□ -0.6
SMPD3-212ENST00000574662 MRPS36P82909 103 aaKnown RBP11.32□□□□□ -0.6
SMPD3-212ENST00000574662 SPANXA1Q9NS26 97 aa11.32□□□□□ -0.6
SMPD3-212ENST00000574662 HUWE1Q7Z6Z7 4374 aaKnown RBP11.31□□□□□ -0.6
SMPD3-212ENST00000574662 MIFP14174 115 aa11.31□□□□□ -0.6
SMPD3-212ENST00000574662 SMCPP49901 116 aaPredicted RBP11.31□□□□□ -0.6
SMPD3-212ENST00000574662 TIMM21Q9BVV7 248 aa11.31□□□□□ -0.6
SMPD3-212ENST00000574662 NOP10Q9NPE3 64 aaKnown RBP11.31□□□□□ -0.6
SMPD3-212ENST00000574662 DNAJC30Q96LL9 226 aa11.31□□□□□ -0.6
SMPD3-212ENST00000574662 GTSF1LQ9H1H1 148 aa11.31□□□□□ -0.6
SMPD3-212ENST00000574662 PRKDCP78527 4128 aaKnown RBP11.3□□□□□ -0.6
SMPD3-212ENST00000574662 A4D1N5 150 aa11.3□□□□□ -0.6
SMPD3-212ENST00000574662 TCL1BO95988 128 aa11.3□□□□□ -0.6
SMPD3-212ENST00000574662 DAZ2Q13117 558 aaKnown RBP11.3□□□□□ -0.6
SMPD3-212ENST00000574662 PPDPFLQ8WWR9 84 aa11.3□□□□□ -0.6
SMPD3-212ENST00000574662 SPXQ9BT56 116 aa11.3□□□□□ -0.6
SMPD3-212ENST00000574662 M0QXV9 152 aa11.29□□□□□ -0.6
SMPD3-212ENST00000574662 TEN1Q86WV5 123 aa11.29□□□□□ -0.6
SMPD3-212ENST00000574662 A0A0J9YXY3 114 aa11.28□□□□□ -0.6
SMPD3-212ENST00000574662 SCGB1C2P0DMR2 95 aa11.28□□□□□ -0.6
SMPD3-212ENST00000574662 COL7A1Q02388 2944 aa11.28□□□□□ -0.6
SMPD3-212ENST00000574662 TINCRA0A1B0GVN0 87 aa11.28□□□□□ -0.6
SMPD3-212ENST00000574662 IGHV3-33P01772 117 aa11.28□□□□□ -0.6
SMPD3-212ENST00000574662 IGHV3-30-3P0DP02 117 aa11.28□□□□□ -0.6
SMPD3-212ENST00000574662 SFTA2Q6UW10 78 aa11.28□□□□□ -0.6
SMPD3-212ENST00000574662 Q6ZTI0 123 aa11.28□□□□□ -0.6
SMPD3-212ENST00000574662 ERG28Q9UKR5 140 aa11.28□□□□□ -0.6
SMPD3-212ENST00000574662 IGHV3-64A0A075B6Q5 118 aa11.27□□□□□ -0.61
SMPD3-212ENST00000574662 IGHV3-73A0A0B4J1V6 119 aa11.27□□□□□ -0.61
SMPD3-212ENST00000574662 IGHV1-58A0A0C4DH39 117 aa11.27□□□□□ -0.61
SMPD3-212ENST00000574662 SMAGPQ0VAQ4 97 aa11.27□□□□□ -0.61
SMPD3-212ENST00000574662 TRGV1A0A0A0MS02 117 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms