RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 C1orf43Q9BWL3 253 aa9.05□□□□□ -0.96
RPAIN-213ENST00000573577 SMCO4Q9NRQ5 59 aa9.05□□□□□ -0.96
RPAIN-213ENST00000573577 LRP1BQ9NZR2 4599 aa9.05□□□□□ -0.96
RPAIN-213ENST00000573577 DNAH5Q8TE73 4624 aa9.04□□□□□ -0.96
RPAIN-213ENST00000573577 IGLV4-60A0A075B6I1 120 aa9.04□□□□□ -0.96
RPAIN-213ENST00000573577 TMEM238LA0A1B0GVL6 79 aa9.04□□□□□ -0.96
RPAIN-213ENST00000573577 KRTAP10-2P60368 255 aa9.04□□□□□ -0.96
RPAIN-213ENST00000573577 REG3AQ06141 175 aa9.04□□□□□ -0.96
RPAIN-213ENST00000573577 C20orf203Q8NBC4 194 aa9.04□□□□□ -0.96
RPAIN-213ENST00000573577 PRR34Q9NV39 138 aa9.04□□□□□ -0.96
RPAIN-213ENST00000573577 LOC389332A0A1B0GUA5 103 aa9.03□□□□□ -0.96
RPAIN-213ENST00000573577 FABP9Q0Z7S8 132 aa9.03□□□□□ -0.96
RPAIN-213ENST00000573577 KIAA1644Q3SXP7 199 aa9.03□□□□□ -0.96
RPAIN-213ENST00000573577 DGAT2L7PQ6IED9 249 aa9.03□□□□□ -0.96
RPAIN-213ENST00000573577 ENHOQ6UWT2 76 aa9.03□□□□□ -0.96
RPAIN-213ENST00000573577 MRPL52Q86TS9 123 aaKnown RBP9.03□□□□□ -0.96
RPAIN-213ENST00000573577 OR5A1Q8NGJ0 315 aa9.03□□□□□ -0.96
RPAIN-213ENST00000573577 MRPL18Q9H0U6 180 aaKnown RBP9.03□□□□□ -0.96
RPAIN-213ENST00000573577 NXT2Q9NPJ8 142 aaKnown RBP9.03□□□□□ -0.96
RPAIN-213ENST00000573577 RYR1P21817 5038 aa9.02□□□□□ -0.97
RPAIN-213ENST00000573577 A0A087WTM6 91 aa9.02□□□□□ -0.97
RPAIN-213ENST00000573577 TRAV8-4A0A0B4J246 113 aa9.02□□□□□ -0.97
RPAIN-213ENST00000573577 K7EMI3 77 aa9.02□□□□□ -0.97
RPAIN-213ENST00000573577 CLPSL2Q6UWE3 100 aa9.02□□□□□ -0.97
RPAIN-213ENST00000573577 Q8N8P6 123 aa9.02□□□□□ -0.97
RPAIN-213ENST00000573577 TRAPPC1Q9Y5R8 145 aa9.02□□□□□ -0.97
RPAIN-213ENST00000573577 CSDC2Q9Y534 153 aaKnown RBP9.01□□□□□ -0.97
RPAIN-213ENST00000573577 ORMDL2Q53FV1 153 aa9□□□□□ -0.97
RPAIN-213ENST00000573577 CBLN2Q8IUK8 224 aa9□□□□□ -0.97
RPAIN-213ENST00000573577 ALKBH7Q9BT30 221 aaPredicted RBP9□□□□□ -0.97
RPAIN-213ENST00000573577 TIMM21Q9BVV7 248 aa9□□□□□ -0.97
RPAIN-213ENST00000573577 G0S2P27469 103 aa8.99□□□□□ -0.97
RPAIN-213ENST00000573577 YPEL4Q96NS1 127 aa8.99□□□□□ -0.97
RPAIN-213ENST00000573577 UBE2D4Q9Y2X8 147 aa8.99□□□□□ -0.97
RPAIN-213ENST00000573577 IFI27P40305 119 aaPredicted RBP8.98□□□□□ -0.97
RPAIN-213ENST00000573577 CDPF1Q6NVV7 123 aa8.98□□□□□ -0.97
RPAIN-213ENST00000573577 ZNF664Q8N3J9 261 aa8.98□□□□□ -0.97
RPAIN-213ENST00000573577 PRSS3P2Q8NHM4 247 aa8.98□□□□□ -0.97
RPAIN-213ENST00000573577 CDC42SE2Q9NRR3 84 aa8.98□□□□□ -0.97
RPAIN-213ENST00000573577 SPANXA1Q9NS26 97 aa8.98□□□□□ -0.97
RPAIN-213ENST00000573577 IGLV10-54A0A075B6I4 117 aa8.97□□□□□ -0.97
RPAIN-213ENST00000573577 IGKV3OR2-268A0A0C4DH90 116 aa8.97□□□□□ -0.97
RPAIN-213ENST00000573577 LRCOL1A6NCL2 159 aa8.97□□□□□ -0.97
RPAIN-213ENST00000573577 RPL39P62891 51 aaKnown RBP8.97□□□□□ -0.97
RPAIN-213ENST00000573577 CYSLTR1Q9Y271 337 aa8.97□□□□□ -0.97
RPAIN-213ENST00000573577 CDK2AP2O75956 126 aa8.96□□□□□ -0.98
RPAIN-213ENST00000573577 FUSP35637 526 aaKnown RBP eCLIP8.96□□□□□ -0.98
RPAIN-213ENST00000573577 CCL25O15444 150 aa8.95□□□□□ -0.98
RPAIN-213ENST00000573577 SS18Q15532 418 aa8.95□□□□□ -0.98
RPAIN-213ENST00000573577 C14orf177Q52M58 125 aa8.95□□□□□ -0.98
RPAIN-213ENST00000573577 FA2HQ7L5A8 372 aa8.95□□□□□ -0.98
RPAIN-213ENST00000573577 MAPKAPK5-AS1Q8N8E1 139 aa8.95□□□□□ -0.98
RPAIN-213ENST00000573577 BAALCQ8WXS3 180 aa8.95□□□□□ -0.98
RPAIN-213ENST00000573577 PYGO1Q9Y3Y4 419 aa8.95□□□□□ -0.98
RPAIN-213ENST00000573577 LINC01549A6NIU2 74 aa8.94□□□□□ -0.98
RPAIN-213ENST00000573577 MRPS36P82909 103 aaKnown RBP8.94□□□□□ -0.98
RPAIN-213ENST00000573577 C2orf66Q6UXQ4 117 aa8.94□□□□□ -0.98
RPAIN-213ENST00000573577 Q8N814 137 aa8.94□□□□□ -0.98
RPAIN-213ENST00000573577 NTN5Q8WTR8 489 aaPredicted RBP8.94□□□□□ -0.98
RPAIN-213ENST00000573577 CHCHD10Q8WYQ3 142 aaPredicted RBP8.94□□□□□ -0.98
RPAIN-213ENST00000573577 PCLOQ9Y6V0 5065 aa8.94□□□□□ -0.98
RPAIN-213ENST00000573577 LINC00959A0A1B0GUT2 108 aa8.93□□□□□ -0.98
RPAIN-213ENST00000573577 RAB5BP61020 215 aa8.93□□□□□ -0.98
RPAIN-213ENST00000573577 Q6ZUT4 128 aa8.93□□□□□ -0.98
RPAIN-213ENST00000573577 APOBP04114 4563 aaKnown RBP8.93□□□□□ -0.98
RPAIN-213ENST00000573577 LINC01546A6NGU7 62 aa8.92□□□□□ -0.98
RPAIN-213ENST00000573577 C1orf196B1AJZ1 125 aa8.92□□□□□ -0.98
RPAIN-213ENST00000573577 LECT2O14960 151 aa8.92□□□□□ -0.98
RPAIN-213ENST00000573577 NPSP0C0P6 89 aa8.92□□□□□ -0.98
RPAIN-213ENST00000573577 WFDC2Q14508 124 aa8.92□□□□□ -0.98
RPAIN-213ENST00000573577 KRTAP26-1Q6PEX3 210 aa8.92□□□□□ -0.98
RPAIN-213ENST00000573577 Q6ZN92 141 aa8.92□□□□□ -0.98
RPAIN-213ENST00000573577 C18orf32Q8TCD1 76 aa8.92□□□□□ -0.98
RPAIN-213ENST00000573577 AP5S1Q9NUS5 200 aa8.92□□□□□ -0.98
RPAIN-213ENST00000573577 TRAV13-1A0A0B4J241 112 aa8.91□□□□□ -0.98
RPAIN-213ENST00000573577 GAGE12HA6NDE8 117 aa8.91□□□□□ -0.98
RPAIN-213ENST00000573577 USP17L23D6RBM5 183 aa8.91□□□□□ -0.98
RPAIN-213ENST00000573577 RNASE13Q5GAN3 156 aaKnown RBP8.91□□□□□ -0.98
RPAIN-213ENST00000573577 PAPPA-AS1Q5QFB9 102 aa8.91□□□□□ -0.98
RPAIN-213ENST00000573577 CFAP161Q6P656 301 aa8.91□□□□□ -0.98
RPAIN-213ENST00000573577 TOMM6Q96B49 74 aa8.91□□□□□ -0.98
RPAIN-213ENST00000573577 TMEM141Q96I45 108 aa8.91□□□□□ -0.98
RPAIN-213ENST00000573577 HSPG2P98160 4391 aa8.9□□□□□ -0.98
RPAIN-213ENST00000573577 IGLV5-52A0A0A0MRZ9 124 aa8.9□□□□□ -0.98
RPAIN-213ENST00000573577 COLCA2A8K830 154 aa8.9□□□□□ -0.98
RPAIN-213ENST00000573577 LINC00614P0C842 121 aa8.9□□□□□ -0.98
RPAIN-213ENST00000573577 XCL1P47992 114 aa8.9□□□□□ -0.98
RPAIN-213ENST00000573577 CD164L2Q6UWJ8 174 aa8.9□□□□□ -0.98
RPAIN-213ENST00000573577 TEX43Q6ZNM6 134 aa8.9□□□□□ -0.98
RPAIN-213ENST00000573577 IGLV4-3A0A075B6K6 122 aa8.89□□□□□ -0.99
RPAIN-213ENST00000573577 IFITM10A6NMD0 228 aa8.89□□□□□ -0.99
RPAIN-213ENST00000573577 TRGC2P03986 189 aa8.89□□□□□ -0.99
RPAIN-213ENST00000573577 S100A1P23297 94 aa8.89□□□□□ -0.99
RPAIN-213ENST00000573577 GCSHP23434 173 aa8.89□□□□□ -0.99
RPAIN-213ENST00000573577 KRTAP10-1P60331 282 aa8.89□□□□□ -0.99
RPAIN-213ENST00000573577 TIMM17AQ99595 171 aa8.89□□□□□ -0.99
RPAIN-213ENST00000573577 OPRPNQ99935 248 aaPredicted RBP8.89□□□□□ -0.99
RPAIN-213ENST00000573577 C2orf88Q9BSF0 95 aa8.89□□□□□ -0.99
RPAIN-213ENST00000573577 DNAH8Q96JB1 4490 aa8.88□□□□□ -0.99
RPAIN-213ENST00000573577 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms