RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 TMEM18Q96B42 140 aa14.7□□□□□ -0.06
RAB40B-207ENST00000572603 CDC42SE2Q9NRR3 84 aa14.7□□□□□ -0.06
RAB40B-207ENST00000572603 PRSS29PA6NIE9 313 aa14.69□□□□□ -0.06
RAB40B-207ENST00000572603 MIAQ16674 131 aa14.69□□□□□ -0.06
RAB40B-207ENST00000572603 TMEM101Q96IK0 257 aa14.69□□□□□ -0.06
RAB40B-207ENST00000572603 EPPK1P58107 5090 aaKnown RBP14.69□□□□□ -0.06
RAB40B-207ENST00000572603 KRTAP26-1Q6PEX3 210 aa14.68□□□□□ -0.06
RAB40B-207ENST00000572603 Q6ZUT4 128 aa14.68□□□□□ -0.06
RAB40B-207ENST00000572603 SPANXA1Q9NS26 97 aa14.68□□□□□ -0.06
RAB40B-207ENST00000572603 IGKV2D-24A0A075B6R9 120 aa14.67□□□□□ -0.06
RAB40B-207ENST00000572603 C2orf66Q6UXQ4 117 aa14.67□□□□□ -0.06
RAB40B-207ENST00000572603 MAPKAPK5-AS1Q8N8E1 139 aa14.67□□□□□ -0.06
RAB40B-207ENST00000572603 SMAGPQ0VAQ4 97 aa14.66□□□□□ -0.06
RAB40B-207ENST00000572603 FA2HQ7L5A8 372 aa14.66□□□□□ -0.06
RAB40B-207ENST00000572603 ZNF664Q8N3J9 261 aa14.66□□□□□ -0.06
RAB40B-207ENST00000572603 RMI2Q96E14 147 aa14.66□□□□□ -0.06
RAB40B-207ENST00000572603 TM2D2Q9BX73 214 aa14.66□□□□□ -0.06
RAB40B-207ENST00000572603 CYSLTR1Q9Y271 337 aa14.66□□□□□ -0.06
RAB40B-207ENST00000572603 A0A1B0GVY2 172 aa14.65□□□□□ -0.06
RAB40B-207ENST00000572603 C1orf43Q9BWL3 253 aa14.65□□□□□ -0.06
RAB40B-207ENST00000572603 DNAH5Q8TE73 4624 aa14.65□□□□□ -0.06
RAB40B-207ENST00000572603 MRPS36P82909 103 aaKnown RBP14.64□□□□□ -0.07
RAB40B-207ENST00000572603 RNASE13Q5GAN3 156 aaKnown RBP14.64□□□□□ -0.07
RAB40B-207ENST00000572603 DGAT2L7PQ6IED9 249 aa14.64□□□□□ -0.07
RAB40B-207ENST00000572603 OPRPNQ99935 248 aaPredicted RBP14.64□□□□□ -0.07
RAB40B-207ENST00000572603 PYGO1Q9Y3Y4 419 aa14.64□□□□□ -0.07
RAB40B-207ENST00000572603 PKHD1P08F94 4074 aa14.63□□□□□ -0.07
RAB40B-207ENST00000572603 DYNC1H1Q14204 4646 aaKnown RBP14.63□□□□□ -0.07
RAB40B-207ENST00000572603 IGLV10-54A0A075B6I4 117 aa14.63□□□□□ -0.07
RAB40B-207ENST00000572603 IGKV3OR2-268A0A0C4DH90 116 aa14.63□□□□□ -0.07
RAB40B-207ENST00000572603 LRCOL1A6NCL2 159 aa14.63□□□□□ -0.07
RAB40B-207ENST00000572603 COX11Q9Y6N1 276 aa14.63□□□□□ -0.07
RAB40B-207ENST00000572603 IGLV4-3A0A075B6K6 122 aa14.62□□□□□ -0.07
RAB40B-207ENST00000572603 A0A096LNJ9 63 aa14.62□□□□□ -0.07
RAB40B-207ENST00000572603 TRAV8-4A0A0B4J246 113 aa14.62□□□□□ -0.07
RAB40B-207ENST00000572603 PSCAO43653 123 aa14.62□□□□□ -0.07
RAB40B-207ENST00000572603 WFDC2Q14508 124 aa14.62□□□□□ -0.07
RAB40B-207ENST00000572603 TOMM6Q96B49 74 aa14.62□□□□□ -0.07
RAB40B-207ENST00000572603 AP5S1Q9NUS5 200 aa14.62□□□□□ -0.07
RAB40B-207ENST00000572603 A0A087WTM6 91 aa14.61□□□□□ -0.07
RAB40B-207ENST00000572603 IGIPA6NJ69 53 aa14.61□□□□□ -0.07
RAB40B-207ENST00000572603 LINC00614P0C842 121 aa14.61□□□□□ -0.07
RAB40B-207ENST00000572603 LINC00959A0A1B0GUT2 108 aa14.6□□□□□ -0.07
RAB40B-207ENST00000572603 G0S2P27469 103 aa14.58□□□□□ -0.08
RAB40B-207ENST00000572603 LINC00310P59036 64 aa14.58□□□□□ -0.08
RAB40B-207ENST00000572603 RAB5BP61020 215 aa14.58□□□□□ -0.08
RAB40B-207ENST00000572603 NPSP0C0P6 89 aa14.57□□□□□ -0.08
RAB40B-207ENST00000572603 LINC00173Q6ZV60 143 aa14.57□□□□□ -0.08
RAB40B-207ENST00000572603 BAALCQ8WXS3 180 aa14.57□□□□□ -0.08
RAB40B-207ENST00000572603 CHCHD10Q8WYQ3 142 aaPredicted RBP14.57□□□□□ -0.08
RAB40B-207ENST00000572603 TIMM17AQ99595 171 aa14.57□□□□□ -0.08
RAB40B-207ENST00000572603 CHCHD1Q96BP2 118 aaKnown RBP14.56□□□□□ -0.08
RAB40B-207ENST00000572603 TMEM141Q96I45 108 aa14.56□□□□□ -0.08
RAB40B-207ENST00000572603 GAGE12HA6NDE8 117 aa14.55□□□□□ -0.08
RAB40B-207ENST00000572603 PMCHL1Q16048 86 aa14.55□□□□□ -0.08
RAB40B-207ENST00000572603 LINC01549A6NIU2 74 aa14.54□□□□□ -0.08
RAB40B-207ENST00000572603 LECT2O14960 151 aa14.54□□□□□ -0.08
RAB40B-207ENST00000572603 CCL25O15444 150 aa14.54□□□□□ -0.08
RAB40B-207ENST00000572603 FOXI1Q12951 378 aa14.54□□□□□ -0.08
RAB40B-207ENST00000572603 ZC2HC1BQ5TFG8 222 aa14.54□□□□□ -0.08
RAB40B-207ENST00000572603 ERASQ7Z444 233 aa14.54□□□□□ -0.08
RAB40B-207ENST00000572603 AMELXQ99217 191 aa14.54□□□□□ -0.08
RAB40B-207ENST00000572603 TRAV13-1A0A0B4J241 112 aa14.53□□□□□ -0.08
RAB40B-207ENST00000572603 IFITM10A6NMD0 228 aa14.53□□□□□ -0.08
RAB40B-207ENST00000572603 HIST1H2BKO60814 126 aa14.53□□□□□ -0.08
RAB40B-207ENST00000572603 HBDP02042 147 aa14.53□□□□□ -0.08
RAB40B-207ENST00000572603 HIST1H2BJP06899 126 aa14.53□□□□□ -0.08
RAB40B-207ENST00000572603 HIST1H2BOP23527 126 aa14.53□□□□□ -0.08
RAB40B-207ENST00000572603 HIST1H2BBP33778 126 aa14.53□□□□□ -0.08
RAB40B-207ENST00000572603 HIST1H2BDP58876 126 aa14.53□□□□□ -0.08
RAB40B-207ENST00000572603 HIST1H2BCP62807 126 aa14.53□□□□□ -0.08
RAB40B-207ENST00000572603 HIST2H2BEQ16778 126 aa14.53□□□□□ -0.08
RAB40B-207ENST00000572603 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.53□□□□□ -0.08
RAB40B-207ENST00000572603 BAGE3Q86Y29 109 aa14.53□□□□□ -0.08
RAB40B-207ENST00000572603 HIST1H2BHQ93079 126 aa14.53□□□□□ -0.08
RAB40B-207ENST00000572603 SCGB3A1Q96QR1 104 aa14.53□□□□□ -0.08
RAB40B-207ENST00000572603 HIST1H2BNQ99877 126 aa14.53□□□□□ -0.08
RAB40B-207ENST00000572603 HIST1H2BMQ99879 126 aa14.53□□□□□ -0.08
RAB40B-207ENST00000572603 XCL1P47992 114 aa14.52□□□□□ -0.09
RAB40B-207ENST00000572603 KRTAP10-2P60368 255 aa14.52□□□□□ -0.09
RAB40B-207ENST00000572603 SS18Q15532 418 aa14.52□□□□□ -0.09
RAB40B-207ENST00000572603 PDZD11Q5EBL8 140 aa14.52□□□□□ -0.09
RAB40B-207ENST00000572603 SERF1AO75920 110 aa14.51□□□□□ -0.09
RAB40B-207ENST00000572603 TEX43Q6ZNM6 134 aa14.51□□□□□ -0.09
RAB40B-207ENST00000572603 Q8N814 137 aa14.51□□□□□ -0.09
RAB40B-207ENST00000572603 C1orf196B1AJZ1 125 aa14.5□□□□□ -0.09
RAB40B-207ENST00000572603 USP17L23D6RBM5 183 aa14.5□□□□□ -0.09
RAB40B-207ENST00000572603 Q6ZN92 141 aa14.5□□□□□ -0.09
RAB40B-207ENST00000572603 LRP1BQ9NZR2 4599 aa14.5□□□□□ -0.09
RAB40B-207ENST00000572603 CD164L2Q6UWJ8 174 aa14.49□□□□□ -0.09
RAB40B-207ENST00000572603 SPATA12Q7Z6I5 190 aa14.49□□□□□ -0.09
RAB40B-207ENST00000572603 BIRC6Q9NR09 4857 aa14.48□□□□□ -0.09
RAB40B-207ENST00000572603 EREGO14944 169 aa14.48□□□□□ -0.09
RAB40B-207ENST00000572603 NUPR1O60356 82 aa14.48□□□□□ -0.09
RAB40B-207ENST00000572603 UBE2D1P51668 147 aa14.48□□□□□ -0.09
RAB40B-207ENST00000572603 VCX2Q9H322 139 aa14.48□□□□□ -0.09
RAB40B-207ENST00000572603 HSBP1O75506 76 aa14.47□□□□□ -0.09
RAB40B-207ENST00000572603 FUSP35637 526 aaKnown RBP eCLIP14.47□□□□□ -0.09
RAB40B-207ENST00000572603 PAPPA-AS1Q5QFB9 102 aa14.47□□□□□ -0.09
RAB40B-207ENST00000572603 C15orf56Q8N910 161 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms