RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.22□□□□□ -0.61
SMG6-207ENST00000570756 IGKV2-29A2NJV5 120 aaPredicted RBP11.22□□□□□ -0.61
SMG6-207ENST00000570756 PPDPFQ9H3Y8 114 aa11.22□□□□□ -0.61
SMG6-207ENST00000570756 DOPEY2Q9Y3R5 2298 aa11.21□□□□□ -0.61
SMG6-207ENST00000570756 INAFM2P0DMQ5 153 aa11.21□□□□□ -0.61
SMG6-207ENST00000570756 PROK1P58294 105 aa11.21□□□□□ -0.61
SMG6-207ENST00000570756 VPS13CQ709C8 3753 aa11.21□□□□□ -0.61
SMG6-207ENST00000570756 LINC00467Q9BRT7 94 aa11.21□□□□□ -0.61
SMG6-207ENST00000570756 Q9H8V8 135 aa11.21□□□□□ -0.61
SMG6-207ENST00000570756 BAALC-AS2P0C853 105 aa11.2□□□□□ -0.62
SMG6-207ENST00000570756 CFHR3Q02985 330 aa11.2□□□□□ -0.62
SMG6-207ENST00000570756 PIK3CD-AS1Q5SR53 167 aa11.2□□□□□ -0.62
SMG6-207ENST00000570756 LINC00694P0DN24 101 aa11.2□□□□□ -0.62
SMG6-207ENST00000570756 FAM222AQ5U5X8 452 aa11.2□□□□□ -0.62
SMG6-207ENST00000570756 NRGNQ92686 78 aa11.2□□□□□ -0.62
SMG6-207ENST00000570756 C5orf38Q86SI9 138 aa11.19□□□□□ -0.62
SMG6-207ENST00000570756 SPG11Q96JI7 2443 aa11.19□□□□□ -0.62
SMG6-207ENST00000570756 ABCA12Q86UK0 2595 aa11.19□□□□□ -0.62
SMG6-207ENST00000570756 HTN1P15515 57 aa11.19□□□□□ -0.62
SMG6-207ENST00000570756 HERVK_113P63121 156 aa11.19□□□□□ -0.62
SMG6-207ENST00000570756 DGAT2L7PQ6IED9 249 aa11.19□□□□□ -0.62
SMG6-207ENST00000570756 IGLV5-39A0A0G2JS06 123 aa11.18□□□□□ -0.62
SMG6-207ENST00000570756 BEAN1Q3B7T3 259 aa11.18□□□□□ -0.62
SMG6-207ENST00000570756 POLQO75417 2590 aa11.18□□□□□ -0.62
SMG6-207ENST00000570756 C19orf84I3L1E1 186 aa11.17□□□□□ -0.62
SMG6-207ENST00000570756 COX7CP15954 63 aa11.17□□□□□ -0.62
SMG6-207ENST00000570756 HECTD1Q9ULT8 2610 aa11.17□□□□□ -0.62
SMG6-207ENST00000570756 KNCNA6PVL3 124 aa11.17□□□□□ -0.62
SMG6-207ENST00000570756 IGHV4-38-2P0DP08 117 aa11.17□□□□□ -0.62
SMG6-207ENST00000570756 FBN2P35556 2912 aa11.17□□□□□ -0.62
SMG6-207ENST00000570756 ZNF415Q09FC8 603 aa11.16□□□□□ -0.62
SMG6-207ENST00000570756 Q8N2B8 174 aa11.16□□□□□ -0.62
SMG6-207ENST00000570756 PTPN13Q12923 2485 aa11.16□□□□□ -0.62
SMG6-207ENST00000570756 J3KT08 172 aa11.16□□□□□ -0.62
SMG6-207ENST00000570756 RBMY1A1P0DJD3 496 aaKnown RBP11.16□□□□□ -0.62
SMG6-207ENST00000570756 RBMY1CP0DJD4 496 aa11.16□□□□□ -0.62
SMG6-207ENST00000570756 PSMB8P28062 276 aa11.16□□□□□ -0.62
SMG6-207ENST00000570756 RBMY1FQ15415 496 aaKnown RBP11.16□□□□□ -0.62
SMG6-207ENST00000570756 LRRC75A-AS1Q8N1F1 130 aa11.16□□□□□ -0.62
SMG6-207ENST00000570756 ZNF625Q96I27 306 aaPredicted RBP11.16□□□□□ -0.62
SMG6-207ENST00000570756 A0A0U1RRA0 63 aa11.15□□□□□ -0.62
SMG6-207ENST00000570756 A0A1B0GX51 115 aa11.15□□□□□ -0.62
SMG6-207ENST00000570756 ATOX1O00244 68 aa11.15□□□□□ -0.62
SMG6-207ENST00000570756 GAGE2AQ6NT46 116 aa11.15□□□□□ -0.62
SMG6-207ENST00000570756 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.15□□□□□ -0.62
SMG6-207ENST00000570756 Q6ZSN1 163 aa11.15□□□□□ -0.63
SMG6-207ENST00000570756 Q9UF83 564 aa11.15□□□□□ -0.63
SMG6-207ENST00000570756 IGHV3-38A0A0C4DH36 116 aa11.14□□□□□ -0.63
SMG6-207ENST00000570756 IGHV3-53P01767 116 aa11.14□□□□□ -0.63
SMG6-207ENST00000570756 SOSTDC1Q6X4U4 206 aa11.14□□□□□ -0.63
SMG6-207ENST00000570756 PRIMA1Q86XR5 153 aa11.14□□□□□ -0.63
SMG6-207ENST00000570756 NACAE9PAV3 2078 aa11.14□□□□□ -0.63
SMG6-207ENST00000570756 COX6A2Q02221 97 aa11.14□□□□□ -0.63
SMG6-207ENST00000570756 PF4P02776 101 aa11.13□□□□□ -0.63
SMG6-207ENST00000570756 CRYGAP11844 174 aa11.13□□□□□ -0.63
SMG6-207ENST00000570756 LINC00242Q5T6M2 205 aa11.13□□□□□ -0.63
SMG6-207ENST00000570756 ABCA2Q9BZC7 2435 aa11.13□□□□□ -0.63
SMG6-207ENST00000570756 IGHV3OR16-12A0A075B7B8 117 aa11.13□□□□□ -0.63
SMG6-207ENST00000570756 HIST2H2BCQ6DN03 193 aa11.13□□□□□ -0.63
SMG6-207ENST00000570756 HIST2H2BDQ6DRA6 164 aa11.13□□□□□ -0.63
SMG6-207ENST00000570756 OVOL2Q9BRP0 275 aa11.13□□□□□ -0.63
SMG6-207ENST00000570756 CSDC2Q9Y534 153 aaKnown RBP11.13□□□□□ -0.63
SMG6-207ENST00000570756 SMIM1B2RUZ4 78 aa11.12□□□□□ -0.63
SMG6-207ENST00000570756 PLA2G2AP14555 144 aa11.12□□□□□ -0.63
SMG6-207ENST00000570756 MALP21145 153 aa11.12□□□□□ -0.63
SMG6-207ENST00000570756 HIST1H4AP62805 103 aaKnown RBP11.12□□□□□ -0.63
SMG6-207ENST00000570756 TRAV13-2A0A0B4J235 113 aa11.11□□□□□ -0.63
SMG6-207ENST00000570756 TMEM89A2RUT3 159 aa11.11□□□□□ -0.63
SMG6-207ENST00000570756 SYNJ2BPP57105 145 aa11.11□□□□□ -0.63
SMG6-207ENST00000570756 FAM19A3Q7Z5A8 133 aa11.11□□□□□ -0.63
SMG6-207ENST00000570756 C22orf24Q9Y442 160 aa11.11□□□□□ -0.63
SMG6-207ENST00000570756 ZFHX3Q15911 3703 aa11.11□□□□□ -0.63
SMG6-207ENST00000570756 FAM218AQ96MZ4 157 aa11.11□□□□□ -0.63
SMG6-207ENST00000570756 DNAL4O96015 105 aa11.1□□□□□ -0.63
SMG6-207ENST00000570756 PIMREGQ9BSJ6 248 aa11.1□□□□□ -0.63
SMG6-207ENST00000570756 RPL28P46779 137 aaKnown RBP11.1□□□□□ -0.63
SMG6-207ENST00000570756 C2orf48Q96LS8 159 aa11.1□□□□□ -0.63
SMG6-207ENST00000570756 SORL1Q92673 2214 aa11.09□□□□□ -0.63
SMG6-207ENST00000570756 ITPR2Q14571 2701 aa11.09□□□□□ -0.63
SMG6-207ENST00000570756 IGHV4-61A0A0C4DH41 118 aa11.09□□□□□ -0.63
SMG6-207ENST00000570756 CRPP02741 224 aa11.09□□□□□ -0.63
SMG6-207ENST00000570756 RPS28P62857 69 aaKnown RBP11.09□□□□□ -0.63
SMG6-207ENST00000570756 APCP25054 2843 aa11.08□□□□□ -0.64
SMG6-207ENST00000570756 LOC107984640A0A0U1RRK4 108 aa11.08□□□□□ -0.64
SMG6-207ENST00000570756 A8MTW9 85 aa11.08□□□□□ -0.64
SMG6-207ENST00000570756 KLK5Q9Y337 293 aaPredicted RBP11.08□□□□□ -0.64
SMG6-207ENST00000570756 DEFB131AP59861 70 aa11.07□□□□□ -0.64
SMG6-207ENST00000570756 C5orf47Q569G3 176 aa11.07□□□□□ -0.64
SMG6-207ENST00000570756 Q9HAA7 133 aa11.07□□□□□ -0.64
SMG6-207ENST00000570756 RS1O15537 224 aa11.07□□□□□ -0.64
SMG6-207ENST00000570756 RPL18AQ02543 176 aaKnown RBP11.07□□□□□ -0.64
SMG6-207ENST00000570756 TRAV13-1A0A0B4J241 112 aa11.06□□□□□ -0.64
SMG6-207ENST00000570756 J3QKU1 62 aa11.06□□□□□ -0.64
SMG6-207ENST00000570756 PRM2P04554 102 aa11.06□□□□□ -0.64
SMG6-207ENST00000570756 C10orf99Q6UWK7 81 aa11.05□□□□□ -0.64
SMG6-207ENST00000570756 FAM19A5Q7Z5A7 132 aaPredicted RBP11.05□□□□□ -0.64
SMG6-207ENST00000570756 C11orf72Q8NBR9 251 aa11.05□□□□□ -0.64
SMG6-207ENST00000570756 HOXD3P31249 432 aaPredicted RBP11.05□□□□□ -0.64
SMG6-207ENST00000570756 FLNBO75369 2602 aaKnown RBP11.05□□□□□ -0.64
SMG6-207ENST00000570756 F5H768 121 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms