RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 PDZD11Q5EBL8 140 aa4.53□□□□□ -1.68
CTDNEP1-204ENST00000570484 PAPPA-AS1Q5QFB9 102 aa4.53□□□□□ -1.68
CTDNEP1-204ENST00000570484 NTM-AS1Q6ZSK4 140 aa4.53□□□□□ -1.68
CTDNEP1-204ENST00000570484 WFDC10BQ8IUB3 73 aa4.53□□□□□ -1.68
CTDNEP1-204ENST00000570484 SCGB3A1Q96QR1 104 aa4.53□□□□□ -1.68
CTDNEP1-204ENST00000570484 CHCHD7Q9BUK0 85 aa4.53□□□□□ -1.68
CTDNEP1-204ENST00000570484 HSPB8Q9UJY1 196 aa4.53□□□□□ -1.68
CTDNEP1-204ENST00000570484 LINC00588Q9Y4M8 146 aa4.53□□□□□ -1.68
CTDNEP1-204ENST00000570484 STAB2Q8WWQ8 2551 aa4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 TRAV9-2A0A087WT02 112 aa4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 LINC01546A6NGU7 62 aa4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 ATP5LO75964 103 aa4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 LEPROTL1O95214 131 aa4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 IGHV3-30P01768 117 aa4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 IGHV3-33P01772 117 aa4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 ANGP03950 147 aaKnown RBP4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 IGHV3-30-3P0DP02 117 aa4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 IGHV3-30-5P0DP03 117 aa4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 ESDP10768 282 aa4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 ODF1Q14990 250 aa4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 MPV17L2Q567V2 206 aa4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 TTC32Q5I0X7 151 aa4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 COA6Q5JTJ3 125 aaKnown RBP4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 FAM19A2Q8N3H0 131 aa4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 C10orf126Q8N4M7 172 aa4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 TOMM6Q96B49 74 aa4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 URB1-AS1Q96HZ7 61 aa4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 C2orf88Q9BSF0 95 aa4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 UPK3BQ9BT76 320 aa4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 DNAH9Q9NYC9 4486 aa4.52□□□□□ -1.69
CTDNEP1-204ENST00000570484 H0Y8G0 127 aa4.51□□□□□ -1.69
CTDNEP1-204ENST00000570484 LY6G6CO95867 125 aa4.51□□□□□ -1.69
CTDNEP1-204ENST00000570484 NPSP0C0P6 89 aa4.51□□□□□ -1.69
CTDNEP1-204ENST00000570484 FABP4P15090 132 aa4.51□□□□□ -1.69
CTDNEP1-204ENST00000570484 RBX1P62877 108 aa4.51□□□□□ -1.69
CTDNEP1-204ENST00000570484 LINC01556Q5JQF7 62 aa4.51□□□□□ -1.69
CTDNEP1-204ENST00000570484 TEX43Q6ZNM6 134 aa4.51□□□□□ -1.69
CTDNEP1-204ENST00000570484 ERASQ7Z444 233 aa4.51□□□□□ -1.69
CTDNEP1-204ENST00000570484 MRPL52Q86TS9 123 aaKnown RBP4.51□□□□□ -1.69
CTDNEP1-204ENST00000570484 Q8N976 141 aa4.51□□□□□ -1.69
CTDNEP1-204ENST00000570484 TMEM141Q96I45 108 aa4.51□□□□□ -1.69
CTDNEP1-204ENST00000570484 TIMM17AQ99595 171 aa4.51□□□□□ -1.69
CTDNEP1-204ENST00000570484 TIMM21Q9BVV7 248 aa4.51□□□□□ -1.69
CTDNEP1-204ENST00000570484 UBE2D4Q9Y2X8 147 aa4.51□□□□□ -1.69
CTDNEP1-204ENST00000570484 A0A096LNJ9 63 aa4.5□□□□□ -1.69
CTDNEP1-204ENST00000570484 IGKV3OR2-268A0A0C4DH90 116 aa4.5□□□□□ -1.69
CTDNEP1-204ENST00000570484 A0A1B0GUV1 79 aa4.5□□□□□ -1.69
CTDNEP1-204ENST00000570484 C20orf202A1L168 122 aa4.5□□□□□ -1.69
CTDNEP1-204ENST00000570484 IFITM10A6NMD0 228 aa4.5□□□□□ -1.69
CTDNEP1-204ENST00000570484 K7EP13 123 aa4.5□□□□□ -1.69
CTDNEP1-204ENST00000570484 DNAH10OSP0CZ25 163 aa4.5□□□□□ -1.69
CTDNEP1-204ENST00000570484 SNRPEP62304 92 aaKnown RBP4.5□□□□□ -1.69
CTDNEP1-204ENST00000570484 LGALS9CQ6DKI2 356 aa4.5□□□□□ -1.69
CTDNEP1-204ENST00000570484 CLPSL2Q6UWE3 100 aa4.5□□□□□ -1.69
CTDNEP1-204ENST00000570484 Q6ZUT4 128 aa4.5□□□□□ -1.69
CTDNEP1-204ENST00000570484 HIST3H2BBQ8N257 126 aa4.5□□□□□ -1.69
CTDNEP1-204ENST00000570484 LINC00476Q8WZB0 136 aa4.5□□□□□ -1.69
CTDNEP1-204ENST00000570484 IFI27L1Q96BM0 104 aa4.5□□□□□ -1.69
CTDNEP1-204ENST00000570484 PACRGQ96M98 296 aaPredicted RBP4.5□□□□□ -1.69
CTDNEP1-204ENST00000570484 MAP1LC3CQ9BXW4 147 aa4.5□□□□□ -1.69
CTDNEP1-204ENST00000570484 Q9H8V8 135 aa4.5□□□□□ -1.69
CTDNEP1-204ENST00000570484 PYGO1Q9Y3Y4 419 aa4.5□□□□□ -1.69
CTDNEP1-204ENST00000570484 CSDC2Q9Y534 153 aaKnown RBP4.5□□□□□ -1.69
CTDNEP1-204ENST00000570484 IGLV4-3A0A075B6K6 122 aa4.49□□□□□ -1.69
CTDNEP1-204ENST00000570484 NUPR1O60356 82 aa4.49□□□□□ -1.69
CTDNEP1-204ENST00000570484 PRSS1P07477 247 aa4.49□□□□□ -1.69
CTDNEP1-204ENST00000570484 KRTDAPP60985 99 aa4.49□□□□□ -1.69
CTDNEP1-204ENST00000570484 MRPS36P82909 103 aaKnown RBP4.49□□□□□ -1.69
CTDNEP1-204ENST00000570484 RNASE13Q5GAN3 156 aaKnown RBP4.49□□□□□ -1.69
CTDNEP1-204ENST00000570484 ZNF664Q8N3J9 261 aa4.49□□□□□ -1.69
CTDNEP1-204ENST00000570484 UBE2WQ96B02 151 aa4.49□□□□□ -1.69
CTDNEP1-204ENST00000570484 RMI2Q96E14 147 aa4.49□□□□□ -1.69
CTDNEP1-204ENST00000570484 VCX2Q9H322 139 aa4.49□□□□□ -1.69
CTDNEP1-204ENST00000570484 KLK12Q9UKR0 248 aa4.49□□□□□ -1.69
CTDNEP1-204ENST00000570484 NACAE9PAV3 2078 aa4.49□□□□□ -1.69
CTDNEP1-204ENST00000570484 COL7A1Q02388 2944 aa4.48□□□□□ -1.69
CTDNEP1-204ENST00000570484 IGLV4-60A0A075B6I1 120 aa4.48□□□□□ -1.69
CTDNEP1-204ENST00000570484 TRAV13-1A0A0B4J241 112 aa4.48□□□□□ -1.69
CTDNEP1-204ENST00000570484 C5orf52A6NGY3 159 aa4.48□□□□□ -1.69
CTDNEP1-204ENST00000570484 IGIPA6NJ69 53 aa4.48□□□□□ -1.69
CTDNEP1-204ENST00000570484 REG3AQ06141 175 aa4.48□□□□□ -1.69
CTDNEP1-204ENST00000570484 PMVKQ15126 192 aa4.48□□□□□ -1.69
CTDNEP1-204ENST00000570484 SS18Q15532 418 aa4.48□□□□□ -1.69
CTDNEP1-204ENST00000570484 LINC00269Q8N2A0 174 aa4.48□□□□□ -1.69
CTDNEP1-204ENST00000570484 BAALCQ8WXS3 180 aa4.48□□□□□ -1.69
CTDNEP1-204ENST00000570484 HIST1H2BLQ99880 126 aa4.48□□□□□ -1.69
CTDNEP1-204ENST00000570484 KRTAP17-1Q9BYP8 105 aa4.48□□□□□ -1.69
CTDNEP1-204ENST00000570484 Q9HAA7 133 aa4.48□□□□□ -1.69
CTDNEP1-204ENST00000570484 TRAV8-3A0A0A6YYJ7 113 aa4.47□□□□□ -1.69
CTDNEP1-204ENST00000570484 NBDYA0A0U1RRE5 68 aa4.47□□□□□ -1.69
CTDNEP1-204ENST00000570484 SEC11AP67812 179 aa4.47□□□□□ -1.69
CTDNEP1-204ENST00000570484 MIAQ16674 131 aa4.47□□□□□ -1.69
CTDNEP1-204ENST00000570484 OPRPNQ99935 248 aaPredicted RBP4.47□□□□□ -1.69
CTDNEP1-204ENST00000570484 C1orf43Q9BWL3 253 aa4.47□□□□□ -1.69
CTDNEP1-204ENST00000570484 GEMIN7Q9H840 131 aaKnown RBP4.47□□□□□ -1.69
CTDNEP1-204ENST00000570484 CDC42SE2Q9NRR3 84 aa4.47□□□□□ -1.69
CTDNEP1-204ENST00000570484 IGLV10-54A0A075B6I4 117 aa4.46□□□□□ -1.7
CTDNEP1-204ENST00000570484 IGKV2D-24A0A075B6R9 120 aa4.46□□□□□ -1.7
CTDNEP1-204ENST00000570484 TRAV12-1A0A0B4J245 112 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms