RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 TRAV26-2A0A0B4J265 109 aa5.87□□□□□ -1.47
TCF4-246ENST00000570287 C3orf56Q8N813 242 aa5.87□□□□□ -1.47
TCF4-246ENST00000570287 LINC00476Q8WZB0 136 aa5.87□□□□□ -1.47
TCF4-246ENST00000570287 FLNCQ14315 2725 aa5.87□□□□□ -1.47
TCF4-246ENST00000570287 LOC100131303A0A0U1RQF7 123 aa5.86□□□□□ -1.47
TCF4-246ENST00000570287 H3BMM0 161 aa5.86□□□□□ -1.47
TCF4-246ENST00000570287 C9orf153Q5TBE3 101 aa5.86□□□□□ -1.47
TCF4-246ENST00000570287 REG3GQ6UW15 175 aa5.86□□□□□ -1.47
TCF4-246ENST00000570287 UBE2WQ96B02 151 aa5.86□□□□□ -1.47
TCF4-246ENST00000570287 TRBV30A0A0K0K1B3 111 aa5.86□□□□□ -1.47
TCF4-246ENST00000570287 TMEM258P61165 79 aa5.86□□□□□ -1.47
TCF4-246ENST00000570287 PRR9Q5T870 116 aa5.86□□□□□ -1.47
TCF4-246ENST00000570287 ZFAND2AQ8N6M9 145 aa5.86□□□□□ -1.47
TCF4-246ENST00000570287 RHPN1-AS1Q9BWJ2 59 aa5.86□□□□□ -1.47
TCF4-246ENST00000570287 DAZ1Q9NQZ3 744 aaKnown RBP5.86□□□□□ -1.47
TCF4-246ENST00000570287 USP9XQ93008 2570 aaPredicted RBP5.86□□□□□ -1.47
TCF4-246ENST00000570287 IGLV5-52A0A0A0MRZ9 124 aa5.85□□□□□ -1.47
TCF4-246ENST00000570287 TRAV21A0A0B4J279 112 aa5.85□□□□□ -1.47
TCF4-246ENST00000570287 TSPEAR-AS2P59090 65 aa5.85□□□□□ -1.47
TCF4-246ENST00000570287 FAM19A4Q96LR4 140 aa5.85□□□□□ -1.47
TCF4-246ENST00000570287 C11orf86A6NJI1 115 aa5.85□□□□□ -1.47
TCF4-246ENST00000570287 PMAIP1Q13794 54 aa5.85□□□□□ -1.47
TCF4-246ENST00000570287 SPANXN1Q5VSR9 72 aa5.85□□□□□ -1.47
TCF4-246ENST00000570287 A0A096LNT2 108 aa5.85□□□□□ -1.47
TCF4-246ENST00000570287 H3BT86 120 aa5.85□□□□□ -1.47
TCF4-246ENST00000570287 PSMB8P28062 276 aa5.85□□□□□ -1.47
TCF4-246ENST00000570287 C2orf66Q6UXQ4 117 aa5.85□□□□□ -1.47
TCF4-246ENST00000570287 SDIM1Q6ZPB5 146 aa5.85□□□□□ -1.47
TCF4-246ENST00000570287 C16orf95Q9H693 158 aa5.85□□□□□ -1.47
TCF4-246ENST00000570287 KLK5Q9Y337 293 aaPredicted RBP5.85□□□□□ -1.47
TCF4-246ENST00000570287 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.85□□□□□ -1.47
TCF4-246ENST00000570287 CELSR1Q9NYQ6 3014 aa5.84□□□□□ -1.47
TCF4-246ENST00000570287 SPG11Q96JI7 2443 aa5.84□□□□□ -1.47
TCF4-246ENST00000570287 HERVK_113P61574 105 aa5.84□□□□□ -1.47
TCF4-246ENST00000570287 DEFB112Q30KQ8 113 aa5.84□□□□□ -1.47
TCF4-246ENST00000570287 M0R381 172 aa5.84□□□□□ -1.47
TCF4-246ENST00000570287 IGHV4-59P01825 116 aa5.84□□□□□ -1.47
TCF4-246ENST00000570287 ATP5G1P05496 136 aa5.84□□□□□ -1.47
TCF4-246ENST00000570287 MED14OSP0DP75 135 aa5.84□□□□□ -1.47
TCF4-246ENST00000570287 IGIPA6NJ69 53 aa5.83□□□□□ -1.48
TCF4-246ENST00000570287 H7C423 109 aa5.83□□□□□ -1.48
TCF4-246ENST00000570287 TMEM170BQ5T4T1 132 aa5.83□□□□□ -1.48
TCF4-246ENST00000570287 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.83□□□□□ -1.48
TCF4-246ENST00000570287 A0A0J9YX75 114 aa5.83□□□□□ -1.48
TCF4-246ENST00000570287 PRAC1Q96KF2 57 aa5.83□□□□□ -1.48
TCF4-246ENST00000570287 CELSR2Q9HCU4 2923 aa5.83□□□□□ -1.48
TCF4-246ENST00000570287 ACACBO00763 2458 aa5.82□□□□□ -1.48
TCF4-246ENST00000570287 S100A4P26447 101 aaKnown RBP5.82□□□□□ -1.48
TCF4-246ENST00000570287 C14orf178Q8N769 122 aaPredicted RBP5.82□□□□□ -1.48
TCF4-246ENST00000570287 MYO18BQ8IUG5 2567 aa5.82□□□□□ -1.48
TCF4-246ENST00000570287 ACYP1P07311 99 aa5.82□□□□□ -1.48
TCF4-246ENST00000570287 RNASE4P34096 147 aaKnown RBP5.82□□□□□ -1.48
TCF4-246ENST00000570287 DEFB1P60022 68 aa5.82□□□□□ -1.48
TCF4-246ENST00000570287 ZNF56Q15929 161 aa5.82□□□□□ -1.48
TCF4-246ENST00000570287 IGKV3-7A0A075B6H7 116 aa5.81□□□□□ -1.48
TCF4-246ENST00000570287 TMEM223A0PJW6 202 aa5.81□□□□□ -1.48
TCF4-246ENST00000570287 PROK1P58294 105 aa5.81□□□□□ -1.48
TCF4-246ENST00000570287 DCANP1Q8TF63 244 aa5.81□□□□□ -1.48
TCF4-246ENST00000570287 PHLDA3Q9Y5J5 127 aa5.81□□□□□ -1.48
TCF4-246ENST00000570287 IGLV5-45A0A087WSX0 123 aa5.81□□□□□ -1.48
TCF4-246ENST00000570287 ZNF876PQ49A33 203 aa5.81□□□□□ -1.48
TCF4-246ENST00000570287 DPH3P1Q9H4G8 78 aa5.81□□□□□ -1.48
TCF4-246ENST00000570287 KLLNB2CW77 178 aa5.81□□□□□ -1.48
TCF4-246ENST00000570287 FSHBP01225 129 aa5.81□□□□□ -1.48
TCF4-246ENST00000570287 PRB1P04280 392 aa5.81□□□□□ -1.48
TCF4-246ENST00000570287 TMEM141Q96I45 108 aa5.81□□□□□ -1.48
TCF4-246ENST00000570287 TIMM17AQ99595 171 aa5.81□□□□□ -1.48
TCF4-246ENST00000570287 MAP1AP78559 2803 aaPredicted RBP5.81□□□□□ -1.48
TCF4-246ENST00000570287 SDHAF1A6NFY7 115 aa5.8□□□□□ -1.48
TCF4-246ENST00000570287 C2orf82Q6UX34 121 aa5.8□□□□□ -1.48
TCF4-246ENST00000570287 UTP20O75691 2785 aaKnown RBP5.8□□□□□ -1.48
TCF4-246ENST00000570287 PPP1R17O96001 155 aa5.8□□□□□ -1.48
TCF4-246ENST00000570287 HIST1H4AP62805 103 aaKnown RBP5.8□□□□□ -1.48
TCF4-246ENST00000570287 CSPG4Q6UVK1 2322 aa5.8□□□□□ -1.48
TCF4-246ENST00000570287 LEPROTO15243 131 aa5.79□□□□□ -1.48
TCF4-246ENST00000570287 GNRH2O43555 120 aa5.79□□□□□ -1.48
TCF4-246ENST00000570287 NXPH4O95158 308 aa5.79□□□□□ -1.48
TCF4-246ENST00000570287 NDUFC2O95298 119 aa5.79□□□□□ -1.48
TCF4-246ENST00000570287 RNASE3P12724 160 aaKnown RBP5.79□□□□□ -1.48
TCF4-246ENST00000570287 CXCL5P42830 114 aa5.79□□□□□ -1.48
TCF4-246ENST00000570287 CEMP1Q6PRD7 247 aaPredicted RBP5.79□□□□□ -1.48
TCF4-246ENST00000570287 MUSTN1Q8IVN3 82 aa5.79□□□□□ -1.48
TCF4-246ENST00000570287 RPL39LQ96EH5 51 aaKnown RBP5.79□□□□□ -1.48
TCF4-246ENST00000570287 ANKRD17O75179 2603 aaKnown RBP5.79□□□□□ -1.48
TCF4-246ENST00000570287 CRYBG3Q68DQ2 2970 aa5.79□□□□□ -1.48
TCF4-246ENST00000570287 LST1O00453 97 aa5.79□□□□□ -1.48
TCF4-246ENST00000570287 C10orf99Q6UWK7 81 aa5.79□□□□□ -1.48
TCF4-246ENST00000570287 Q6ZRU5 148 aa5.79□□□□□ -1.48
TCF4-246ENST00000570287 C5orf38Q86SI9 138 aa5.79□□□□□ -1.48
TCF4-246ENST00000570287 MAPK1IP1LQ8NDC0 245 aa5.79□□□□□ -1.48
TCF4-246ENST00000570287 REG3AQ06141 175 aa5.79□□□□□ -1.48
TCF4-246ENST00000570287 LITAFQ99732 161 aa5.79□□□□□ -1.48
TCF4-246ENST00000570287 USP24Q9UPU5 2620 aa5.79□□□□□ -1.48
TCF4-246ENST00000570287 IGHV4OR15-8A0A075B7B6 117 aa5.78□□□□□ -1.48
TCF4-246ENST00000570287 A0A087WW49 117 aa5.78□□□□□ -1.48
TCF4-246ENST00000570287 ZNF22P17026 224 aaPredicted RBP5.78□□□□□ -1.48
TCF4-246ENST00000570287 SNRPD3P62318 126 aaKnown RBP5.78□□□□□ -1.48
TCF4-246ENST00000570287 ZNF702PQ9H963 129 aa5.78□□□□□ -1.48
TCF4-246ENST00000570287 ICOSQ9Y6W8 199 aa5.78□□□□□ -1.48
TCF4-246ENST00000570287 UBR5O95071 2799 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms