RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 RPL39P62891 51 aaKnown RBP15.85■□□□□ 0.13
RAB40C-212ENST00000569575 MIAQ16674 131 aa15.85■□□□□ 0.13
RAB40C-212ENST00000569575 COA6Q5JTJ3 125 aaKnown RBP15.85■□□□□ 0.13
RAB40C-212ENST00000569575 TMEM141Q96I45 108 aa15.85■□□□□ 0.13
RAB40C-212ENST00000569575 KLK12Q9UKR0 248 aa15.85■□□□□ 0.13
RAB40C-212ENST00000569575 COX11Q9Y6N1 276 aa15.85■□□□□ 0.13
RAB40C-212ENST00000569575 CRPP02741 224 aa15.84■□□□□ 0.13
RAB40C-212ENST00000569575 RMI2Q96E14 147 aa15.84■□□□□ 0.13
RAB40C-212ENST00000569575 IGLV4-60A0A075B6I1 120 aa15.83■□□□□ 0.12
RAB40C-212ENST00000569575 TRAV8-4A0A0B4J246 113 aa15.83■□□□□ 0.12
RAB40C-212ENST00000569575 IGIPA6NJ69 53 aa15.82■□□□□ 0.12
RAB40C-212ENST00000569575 SERF1AO75920 110 aa15.82■□□□□ 0.12
RAB40C-212ENST00000569575 REG3AQ06141 175 aa15.82■□□□□ 0.12
RAB40C-212ENST00000569575 Q6ZN92 141 aa15.81■□□□□ 0.12
RAB40C-212ENST00000569575 LINC00269Q8N2A0 174 aa15.81■□□□□ 0.12
RAB40C-212ENST00000569575 SCGB3A1Q96QR1 104 aa15.81■□□□□ 0.12
RAB40C-212ENST00000569575 ATP5LO75964 103 aa15.8■□□□□ 0.12
RAB40C-212ENST00000569575 Q8N3U1 123 aa15.8■□□□□ 0.12
RAB40C-212ENST00000569575 TM2D2Q9BX73 214 aa15.8■□□□□ 0.12
RAB40C-212ENST00000569575 PDZD11Q5EBL8 140 aa15.79■□□□□ 0.12
RAB40C-212ENST00000569575 UBE2WQ96B02 151 aa15.79■□□□□ 0.12
RAB40C-212ENST00000569575 KRTAP1-5Q9BYS1 174 aa15.79■□□□□ 0.12
RAB40C-212ENST00000569575 A0A096LNJ9 63 aa15.78■□□□□ 0.12
RAB40C-212ENST00000569575 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.78■□□□□ 0.12
RAB40C-212ENST00000569575 C1orf134Q5TEV5 83 aa15.78■□□□□ 0.12
RAB40C-212ENST00000569575 ENHOQ6UWT2 76 aa15.78■□□□□ 0.12
RAB40C-212ENST00000569575 C6orf223Q8N319 242 aa15.78■□□□□ 0.12
RAB40C-212ENST00000569575 ALMS1Q8TCU4 4167 aa15.77■□□□□ 0.12
RAB40C-212ENST00000569575 IGLV4-3A0A075B6K6 122 aa15.77■□□□□ 0.12
RAB40C-212ENST00000569575 M0R2N4 97 aa15.77■□□□□ 0.12
RAB40C-212ENST00000569575 PACRGQ96M98 296 aaPredicted RBP15.77■□□□□ 0.12
RAB40C-212ENST00000569575 VCX2Q9H322 139 aa15.77■□□□□ 0.12
RAB40C-212ENST00000569575 LINC00310P59036 64 aa15.76■□□□□ 0.11
RAB40C-212ENST00000569575 TEX43Q6ZNM6 134 aa15.76■□□□□ 0.11
RAB40C-212ENST00000569575 C2orf88Q9BSF0 95 aa15.76■□□□□ 0.11
RAB40C-212ENST00000569575 NDUFA6P56556 154 aa15.75■□□□□ 0.11
RAB40C-212ENST00000569575 SS18Q15532 418 aa15.75■□□□□ 0.11
RAB40C-212ENST00000569575 AMELXQ99217 191 aa15.75■□□□□ 0.11
RAB40C-212ENST00000569575 C1orf43Q9BWL3 253 aa15.75■□□□□ 0.11
RAB40C-212ENST00000569575 VPS13DQ5THJ4 4388 aa15.74■□□□□ 0.11
RAB40C-212ENST00000569575 Q6ZUT4 128 aa15.74■□□□□ 0.11
RAB40C-212ENST00000569575 FAM104AQ969W3 186 aa15.74■□□□□ 0.11
RAB40C-212ENST00000569575 HSPB8Q9UJY1 196 aa15.73■□□□□ 0.11
RAB40C-212ENST00000569575 LINC00959A0A1B0GUT2 108 aa15.72■□□□□ 0.11
RAB40C-212ENST00000569575 LEPROTL1O95214 131 aa15.72■□□□□ 0.11
RAB40C-212ENST00000569575 S100A6P06703 90 aa15.72■□□□□ 0.11
RAB40C-212ENST00000569575 PMCHL1Q16048 86 aa15.72■□□□□ 0.11
RAB40C-212ENST00000569575 SEC11AP67812 179 aa15.71■□□□□ 0.11
RAB40C-212ENST00000569575 FAM19A2Q8N3H0 131 aa15.71■□□□□ 0.11
RAB40C-212ENST00000569575 NUPR1O60356 82 aa15.7■□□□□ 0.1
RAB40C-212ENST00000569575 PMVKQ15126 192 aa15.7■□□□□ 0.1
RAB40C-212ENST00000569575 Q9HAA7 133 aa15.7■□□□□ 0.1
RAB40C-212ENST00000569575 IGKV2D-24A0A075B6R9 120 aa15.69■□□□□ 0.1
RAB40C-212ENST00000569575 IFITM10A6NMD0 228 aa15.69■□□□□ 0.1
RAB40C-212ENST00000569575 OPRPNQ99935 248 aaPredicted RBP15.69■□□□□ 0.1
RAB40C-212ENST00000569575 LYSTQ99698 3801 aa15.68■□□□□ 0.1
RAB40C-212ENST00000569575 FAM19A3Q7Z5A8 133 aa15.68■□□□□ 0.1
RAB40C-212ENST00000569575 IFI27L1Q96BM0 104 aa15.68■□□□□ 0.1
RAB40C-212ENST00000569575 DNAH1Q9P2D7 4330 aa15.67■□□□□ 0.1
RAB40C-212ENST00000569575 PSCAO43653 123 aa15.67■□□□□ 0.1
RAB40C-212ENST00000569575 CLPSL2Q6UWE3 100 aa15.67■□□□□ 0.1
RAB40C-212ENST00000569575 Q6ZRN7 208 aaPredicted RBP15.67■□□□□ 0.1
RAB40C-212ENST00000569575 BAALCQ8WXS3 180 aa15.67■□□□□ 0.1
RAB40C-212ENST00000569575 CD164L2Q6UWJ8 174 aa15.66■□□□□ 0.1
RAB40C-212ENST00000569575 LINC00336Q6ZUF6 198 aa15.66■□□□□ 0.1
RAB40C-212ENST00000569575 LINC00173Q6ZV60 143 aa15.66■□□□□ 0.1
RAB40C-212ENST00000569575 CHCHD10Q8WYQ3 142 aaPredicted RBP15.66■□□□□ 0.1
RAB40C-212ENST00000569575 CST9LQ9H4G1 147 aa15.66■□□□□ 0.1
RAB40C-212ENST00000569575 TRAV13-1A0A0B4J241 112 aa15.65■□□□□ 0.1
RAB40C-212ENST00000569575 TRAV12-1A0A0B4J245 112 aa15.65■□□□□ 0.1
RAB40C-212ENST00000569575 IGKV3OR2-268A0A0C4DH90 116 aa15.65■□□□□ 0.1
RAB40C-212ENST00000569575 UBE2D1P51668 147 aa15.65■□□□□ 0.1
RAB40C-212ENST00000569575 RNASE13Q5GAN3 156 aaKnown RBP15.65■□□□□ 0.1
RAB40C-212ENST00000569575 PRSS1P07477 247 aa15.64■□□□□ 0.09
RAB40C-212ENST00000569575 KRTAP26-1Q6PEX3 210 aa15.63■□□□□ 0.09
RAB40C-212ENST00000569575 MAP1LC3CQ9BXW4 147 aa15.62■□□□□ 0.09
RAB40C-212ENST00000569575 IGLV10-54A0A075B6I4 117 aa15.61■□□□□ 0.09
RAB40C-212ENST00000569575 PRSS29PA6NIE9 313 aa15.61■□□□□ 0.09
RAB40C-212ENST00000569575 S100A2P29034 98 aa15.61■□□□□ 0.09
RAB40C-212ENST00000569575 HERVK_113P63121 156 aa15.61■□□□□ 0.09
RAB40C-212ENST00000569575 DNAH6Q9C0G6 4158 aa15.6■□□□□ 0.09
RAB40C-212ENST00000569575 LINC00242Q5T6M2 205 aa15.6■□□□□ 0.09
RAB40C-212ENST00000569575 CFAP161Q6P656 301 aa15.6■□□□□ 0.09
RAB40C-212ENST00000569575 TINCRA0A1B0GVN0 87 aa15.59■□□□□ 0.09
RAB40C-212ENST00000569575 RTL8CO15255 209 aa15.59■□□□□ 0.09
RAB40C-212ENST00000569575 FABP4P15090 132 aa15.59■□□□□ 0.09
RAB40C-212ENST00000569575 XCL1P47992 114 aa15.59■□□□□ 0.09
RAB40C-212ENST00000569575 LINC01561Q8N1V8 128 aa15.59■□□□□ 0.09
RAB40C-212ENST00000569575 IGHV3OR16-9A0A0B4J2B5 98 aa15.58■□□□□ 0.08
RAB40C-212ENST00000569575 GAGE12HA6NDE8 117 aa15.58■□□□□ 0.08
RAB40C-212ENST00000569575 C5orf52A6NGY3 159 aa15.58■□□□□ 0.08
RAB40C-212ENST00000569575 SPATA12Q7Z6I5 190 aa15.58■□□□□ 0.08
RAB40C-212ENST00000569575 GEMIN7Q9H840 131 aaKnown RBP15.58■□□□□ 0.08
RAB40C-212ENST00000569575 EREGO14944 169 aa15.57■□□□□ 0.08
RAB40C-212ENST00000569575 FOXI1Q12951 378 aa15.57■□□□□ 0.08
RAB40C-212ENST00000569575 C14orf177Q52M58 125 aa15.57■□□□□ 0.08
RAB40C-212ENST00000569575 HIST3H2BBQ8N257 126 aa15.57■□□□□ 0.08
RAB40C-212ENST00000569575 KMT2AQ03164 3969 aa15.56■□□□□ 0.08
RAB40C-212ENST00000569575 COX7A2LO14548 114 aa15.56■□□□□ 0.08
RAB40C-212ENST00000569575 APOMO95445 188 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms