RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 RPL39P62891 51 aaKnown RBP8.73□□□□□ -1.01
CNOT1-217ENST00000569263 FA2HQ7L5A8 372 aa8.72□□□□□ -1.01
CNOT1-217ENST00000569263 TIMM21Q9BVV7 248 aa8.72□□□□□ -1.01
CNOT1-217ENST00000569263 CYSLTR1Q9Y271 337 aa8.72□□□□□ -1.01
CNOT1-217ENST00000569263 IGLV10-54A0A075B6I4 117 aa8.71□□□□□ -1.02
CNOT1-217ENST00000569263 TRAV8-4A0A0B4J246 113 aa8.71□□□□□ -1.02
CNOT1-217ENST00000569263 EREGO14944 169 aa8.71□□□□□ -1.02
CNOT1-217ENST00000569263 G0S2P27469 103 aa8.71□□□□□ -1.02
CNOT1-217ENST00000569263 ZNF664Q8N3J9 261 aa8.71□□□□□ -1.02
CNOT1-217ENST00000569263 C18orf32Q8TCD1 76 aa8.71□□□□□ -1.02
CNOT1-217ENST00000569263 SPANXA1Q9NS26 97 aa8.71□□□□□ -1.02
CNOT1-217ENST00000569263 CSDC2Q9Y534 153 aaKnown RBP8.71□□□□□ -1.02
CNOT1-217ENST00000569263 COLCA2A8K830 154 aa8.7□□□□□ -1.02
CNOT1-217ENST00000569263 C2orf66Q6UXQ4 117 aa8.7□□□□□ -1.02
CNOT1-217ENST00000569263 Q6ZUT4 128 aa8.7□□□□□ -1.02
CNOT1-217ENST00000569263 CDC42SE2Q9NRR3 84 aa8.7□□□□□ -1.02
CNOT1-217ENST00000569263 DNAH17Q9UFH2 4485 aa8.7□□□□□ -1.02
CNOT1-217ENST00000569263 A0A087WTM6 91 aa8.69□□□□□ -1.02
CNOT1-217ENST00000569263 TRGC2P03986 189 aa8.69□□□□□ -1.02
CNOT1-217ENST00000569263 RNASE13Q5GAN3 156 aaKnown RBP8.69□□□□□ -1.02
CNOT1-217ENST00000569263 RAB5BP61020 215 aa8.68□□□□□ -1.02
CNOT1-217ENST00000569263 AP5S1Q9NUS5 200 aa8.68□□□□□ -1.02
CNOT1-217ENST00000569263 A0A1B0GVY2 172 aa8.67□□□□□ -1.02
CNOT1-217ENST00000569263 LINC01546A6NGU7 62 aa8.67□□□□□ -1.02
CNOT1-217ENST00000569263 MRPS36P82909 103 aaKnown RBP8.67□□□□□ -1.02
CNOT1-217ENST00000569263 SS18Q15532 418 aa8.67□□□□□ -1.02
CNOT1-217ENST00000569263 BAALCQ8WXS3 180 aa8.67□□□□□ -1.02
CNOT1-217ENST00000569263 PYGO1Q9Y3Y4 419 aa8.67□□□□□ -1.02
CNOT1-217ENST00000569263 LINC00959A0A1B0GUT2 108 aa8.66□□□□□ -1.02
CNOT1-217ENST00000569263 LECT2O14960 151 aa8.66□□□□□ -1.02
CNOT1-217ENST00000569263 LINC00614P0C842 121 aa8.66□□□□□ -1.02
CNOT1-217ENST00000569263 Q6ZN92 141 aa8.66□□□□□ -1.02
CNOT1-217ENST00000569263 CHCHD10Q8WYQ3 142 aaPredicted RBP8.66□□□□□ -1.02
CNOT1-217ENST00000569263 TOMM6Q96B49 74 aa8.66□□□□□ -1.02
CNOT1-217ENST00000569263 TMEM141Q96I45 108 aa8.66□□□□□ -1.02
CNOT1-217ENST00000569263 OPRPNQ99935 248 aaPredicted RBP8.66□□□□□ -1.02
CNOT1-217ENST00000569263 IGLV4-3A0A075B6K6 122 aa8.65□□□□□ -1.02
CNOT1-217ENST00000569263 TRAV13-1A0A0B4J241 112 aa8.65□□□□□ -1.02
CNOT1-217ENST00000569263 LRCOL1A6NCL2 159 aa8.65□□□□□ -1.02
CNOT1-217ENST00000569263 GAGE12HA6NDE8 117 aa8.65□□□□□ -1.02
CNOT1-217ENST00000569263 LINC01549A6NIU2 74 aa8.65□□□□□ -1.02
CNOT1-217ENST00000569263 IFITM10A6NMD0 228 aa8.65□□□□□ -1.02
CNOT1-217ENST00000569263 XCL1P47992 114 aa8.65□□□□□ -1.02
CNOT1-217ENST00000569263 BAGE3Q86Y29 109 aa8.65□□□□□ -1.02
CNOT1-217ENST00000569263 MAPKAPK5-AS1Q8N8E1 139 aa8.65□□□□□ -1.02
CNOT1-217ENST00000569263 FAT2Q9NYQ8 4349 aa8.64□□□□□ -1.03
CNOT1-217ENST00000569263 CCL25O15444 150 aa8.64□□□□□ -1.03
CNOT1-217ENST00000569263 WFDC2Q14508 124 aa8.64□□□□□ -1.03
CNOT1-217ENST00000569263 PAPPA-AS1Q5QFB9 102 aa8.64□□□□□ -1.03
CNOT1-217ENST00000569263 KRTAP26-1Q6PEX3 210 aa8.64□□□□□ -1.03
CNOT1-217ENST00000569263 TEX43Q6ZNM6 134 aa8.64□□□□□ -1.03
CNOT1-217ENST00000569263 SPATA12Q7Z6I5 190 aa8.64□□□□□ -1.03
CNOT1-217ENST00000569263 URB1-AS1Q96HZ7 61 aa8.64□□□□□ -1.03
CNOT1-217ENST00000569263 SCGB3A1Q96QR1 104 aa8.64□□□□□ -1.03
CNOT1-217ENST00000569263 C1orf196B1AJZ1 125 aa8.63□□□□□ -1.03
CNOT1-217ENST00000569263 HBDP02042 147 aa8.63□□□□□ -1.03
CNOT1-217ENST00000569263 NPSP0C0P6 89 aa8.63□□□□□ -1.03
CNOT1-217ENST00000569263 C14orf177Q52M58 125 aa8.63□□□□□ -1.03
CNOT1-217ENST00000569263 ERASQ7Z444 233 aa8.63□□□□□ -1.03
CNOT1-217ENST00000569263 Q8N814 137 aa8.63□□□□□ -1.03
CNOT1-217ENST00000569263 FAM104AQ969W3 186 aa8.63□□□□□ -1.03
CNOT1-217ENST00000569263 CHCHD1Q96BP2 118 aaKnown RBP8.63□□□□□ -1.03
CNOT1-217ENST00000569263 TIMM17AQ99595 171 aa8.63□□□□□ -1.03
CNOT1-217ENST00000569263 C2orf88Q9BSF0 95 aa8.63□□□□□ -1.03
CNOT1-217ENST00000569263 IGIPA6NJ69 53 aa8.62□□□□□ -1.03
CNOT1-217ENST00000569263 USP17L23D6RBM5 183 aa8.62□□□□□ -1.03
CNOT1-217ENST00000569263 PMCHL1Q16048 86 aa8.62□□□□□ -1.03
CNOT1-217ENST00000569263 VCX2Q9H322 139 aa8.62□□□□□ -1.03
CNOT1-217ENST00000569263 HSBP1O75506 76 aa8.61□□□□□ -1.03
CNOT1-217ENST00000569263 KRTAP10-2P60368 255 aa8.61□□□□□ -1.03
CNOT1-217ENST00000569263 CD164L2Q6UWJ8 174 aa8.61□□□□□ -1.03
CNOT1-217ENST00000569263 HECTD4Q9Y4D8 3996 aa8.6□□□□□ -1.03
CNOT1-217ENST00000569263 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-217ENST00000569263 FOXI1Q12951 378 aa8.6□□□□□ -1.03
CNOT1-217ENST00000569263 CDPF1Q6NVV7 123 aa8.6□□□□□ -1.03
CNOT1-217ENST00000569263 NTN5Q8WTR8 489 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-217ENST00000569263 PGPEP1Q9NXJ5 209 aa8.6□□□□□ -1.03
CNOT1-217ENST00000569263 A0A096LNJ9 63 aa8.59□□□□□ -1.03
CNOT1-217ENST00000569263 IGLV5-52A0A0A0MRZ9 124 aa8.59□□□□□ -1.03
CNOT1-217ENST00000569263 C16orf90A8MZG2 172 aa8.59□□□□□ -1.03
CNOT1-217ENST00000569263 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.59□□□□□ -1.03
CNOT1-217ENST00000569263 MALP21145 153 aa8.59□□□□□ -1.03
CNOT1-217ENST00000569263 ZC2HC1BQ5TFG8 222 aa8.59□□□□□ -1.03
CNOT1-217ENST00000569263 CFAP161Q6P656 301 aa8.59□□□□□ -1.03
CNOT1-217ENST00000569263 LINC00173Q6ZV60 143 aa8.59□□□□□ -1.03
CNOT1-217ENST00000569263 AMELXQ99217 191 aa8.59□□□□□ -1.03
CNOT1-217ENST00000569263 PKD1P98161 4303 aa8.59□□□□□ -1.03
CNOT1-217ENST00000569263 COX7A2LO14548 114 aa8.58□□□□□ -1.04
CNOT1-217ENST00000569263 SERF1AO75920 110 aa8.58□□□□□ -1.04
CNOT1-217ENST00000569263 FUSP35637 526 aaKnown RBP eCLIP8.58□□□□□ -1.04
CNOT1-217ENST00000569263 UBE2D1P51668 147 aa8.58□□□□□ -1.04
CNOT1-217ENST00000569263 EPPK1P58107 5090 aaKnown RBP8.58□□□□□ -1.04
CNOT1-217ENST00000569263 hDV102S1A0JD36 115 aa8.57□□□□□ -1.04
CNOT1-217ENST00000569263 HIST1H2BKO60814 126 aa8.57□□□□□ -1.04
CNOT1-217ENST00000569263 ATP5LO75964 103 aa8.57□□□□□ -1.04
CNOT1-217ENST00000569263 HIST1H2BJP06899 126 aa8.57□□□□□ -1.04
CNOT1-217ENST00000569263 HIST1H2BOP23527 126 aa8.57□□□□□ -1.04
CNOT1-217ENST00000569263 HIST1H2BBP33778 126 aa8.57□□□□□ -1.04
CNOT1-217ENST00000569263 HIST1H2BDP58876 126 aa8.57□□□□□ -1.04
CNOT1-217ENST00000569263 HIST1H2BCP62807 126 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms