RNA–Protein interactions for RNA: ENST00000568494.1

ZNRF1-208, Transcript of zinc and ring finger 1, human

TSL 2

Gene ZNRF1, Length 2,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNRF1-208	ENST00000568494	TMEM170B	Q5T4T1	132 aa		9.48	□□□□□ -0.89
ZNRF1-208	ENST00000568494		G3V4G9	280 aa		9.48	□□□□□ -0.89
ZNRF1-208	ENST00000568494		K7EQD1	137 aa		9.48	□□□□□ -0.89
ZNRF1-208	ENST00000568494	NFE4	Q86UQ8	179 aa		9.48	□□□□□ -0.89
ZNRF1-208	ENST00000568494		A0A1B0GWB2	263 aa		9.47	□□□□□ -0.89
ZNRF1-208	ENST00000568494	HERVK_113	P61574	105 aa		9.47	□□□□□ -0.89
ZNRF1-208	ENST00000568494	AMELX	Q99217	191 aa		9.47	□□□□□ -0.89
ZNRF1-208	ENST00000568494	UBE2D4	Q9Y2X8	147 aa		9.47	□□□□□ -0.89
ZNRF1-208	ENST00000568494	TRGV2	A0A075B6R0	118 aa		9.46	□□□□□ -0.89
ZNRF1-208	ENST00000568494		A0A0J9YXV3	536 aa		9.46	□□□□□ -0.89
ZNRF1-208	ENST00000568494	ZNF815P	A8K554	130 aa		9.46	□□□□□ -0.89
ZNRF1-208	ENST00000568494	RNASE13	Q5GAN3	156 aa	Known RBP	9.46	□□□□□ -0.89
ZNRF1-208	ENST00000568494	SLC25A29	Q8N8R3	303 aa		9.46	□□□□□ -0.89
ZNRF1-208	ENST00000568494	TRBV10-1	A0A0K0K1A3	114 aa		9.46	□□□□□ -0.9
ZNRF1-208	ENST00000568494	RPL36A	P83881	106 aa	Known RBP	9.46	□□□□□ -0.9
ZNRF1-208	ENST00000568494	RPL36AL	Q969Q0	106 aa	Known RBP	9.46	□□□□□ -0.9
ZNRF1-208	ENST00000568494	GAGE12J	A6NER3	117 aa		9.45	□□□□□ -0.9
ZNRF1-208	ENST00000568494	GAGE4	Q13068	117 aa		9.45	□□□□□ -0.9
ZNRF1-208	ENST00000568494	GAGE5	Q13069	117 aa		9.45	□□□□□ -0.9
ZNRF1-208	ENST00000568494	GAGE13	Q4V321	117 aa		9.45	□□□□□ -0.9
ZNRF1-208	ENST00000568494	SPANXA1	Q9NS26	97 aa		9.45	□□□□□ -0.9
ZNRF1-208	ENST00000568494	MGAM2	Q2M2H8	2515 aa		9.45	□□□□□ -0.9
ZNRF1-208	ENST00000568494	ZNF22	P17026	224 aa	Predicted RBP	9.44	□□□□□ -0.9
ZNRF1-208	ENST00000568494	TSPEAR-AS2	P59090	65 aa		9.44	□□□□□ -0.9
ZNRF1-208	ENST00000568494	PLEKHB2	Q96CS7	222 aa		9.44	□□□□□ -0.9
ZNRF1-208	ENST00000568494	TMEM223	A0PJW6	202 aa		9.44	□□□□□ -0.9
ZNRF1-208	ENST00000568494		A6NJY4	79 aa		9.44	□□□□□ -0.9
ZNRF1-208	ENST00000568494	CRYBA4	P53673	196 aa		9.44	□□□□□ -0.9
ZNRF1-208	ENST00000568494	UBE2D3	P61077	147 aa		9.44	□□□□□ -0.9
ZNRF1-208	ENST00000568494	UBE2D2	P62837	147 aa		9.44	□□□□□ -0.9
ZNRF1-208	ENST00000568494	SCGB1D4	Q6XE38	83 aa		9.44	□□□□□ -0.9
ZNRF1-208	ENST00000568494	NBEAL1	Q6ZS30	2694 aa		9.44	□□□□□ -0.9
ZNRF1-208	ENST00000568494		Q6ZUT4	128 aa		9.43	□□□□□ -0.9
ZNRF1-208	ENST00000568494	LOC100131303	A0A0U1RQF7	123 aa		9.43	□□□□□ -0.9
ZNRF1-208	ENST00000568494	NTM-AS1	Q6ZSK4	140 aa		9.43	□□□□□ -0.9
ZNRF1-208	ENST00000568494	DAZ4	Q86SG3	579 aa	Known RBP	9.43	□□□□□ -0.9
ZNRF1-208	ENST00000568494	DAZ3	Q9NR90	486 aa	Known RBP	9.43	□□□□□ -0.9
ZNRF1-208	ENST00000568494		F8W1H4	67 aa		9.42	□□□□□ -0.9
ZNRF1-208	ENST00000568494		X6R8D5	127 aa		9.42	□□□□□ -0.9
ZNRF1-208	ENST00000568494	NOTCH1	P46531	2555 aa		9.42	□□□□□ -0.9
ZNRF1-208	ENST00000568494	TRGV4	A0A0C4DH28	118 aa		9.41	□□□□□ -0.9
ZNRF1-208	ENST00000568494	LEPROT	O15243	131 aa		9.41	□□□□□ -0.9
ZNRF1-208	ENST00000568494	CIDEA	O60543	219 aa		9.41	□□□□□ -0.9
ZNRF1-208	ENST00000568494	MRPS36	P82909	103 aa	Known RBP	9.41	□□□□□ -0.9
ZNRF1-208	ENST00000568494	RPL24	P83731	157 aa	Known RBP	9.41	□□□□□ -0.9
ZNRF1-208	ENST00000568494	FHL2	Q14192	279 aa		9.41	□□□□□ -0.9
ZNRF1-208	ENST00000568494	IGHV3-64	A0A075B6Q5	118 aa		9.41	□□□□□ -0.9
ZNRF1-208	ENST00000568494	TRBV6-4	A0A1B0GX49	114 aa		9.41	□□□□□ -0.9
ZNRF1-208	ENST00000568494		J3QQQ9	107 aa		9.41	□□□□□ -0.9
ZNRF1-208	ENST00000568494	LINC00694	P0DN24	101 aa		9.41	□□□□□ -0.9
ZNRF1-208	ENST00000568494	SRSF9	Q13242	221 aa	Known RBP eCLIP	9.41	□□□□□ -0.9
ZNRF1-208	ENST00000568494	WFDC9	Q8NEX5	89 aa		9.41	□□□□□ -0.9
ZNRF1-208	ENST00000568494	TIMM21	Q9BVV7	248 aa		9.4	□□□□□ -0.9
ZNRF1-208	ENST00000568494		A0A0J9YY99	117 aa		9.39	□□□□□ -0.91
ZNRF1-208	ENST00000568494	TEX48	A0A1B0GUV7	120 aa		9.39	□□□□□ -0.91
ZNRF1-208	ENST00000568494		H3BMG7	143 aa		9.39	□□□□□ -0.91
ZNRF1-208	ENST00000568494	DEFB130B	P0DP73	79 aa		9.39	□□□□□ -0.91
ZNRF1-208	ENST00000568494	DEFB130A	P0DP74	79 aa		9.39	□□□□□ -0.91
ZNRF1-208	ENST00000568494	LGALS3	P17931	250 aa	Known RBP	9.39	□□□□□ -0.91
ZNRF1-208	ENST00000568494	UBE2D1	P51668	147 aa		9.39	□□□□□ -0.91
ZNRF1-208	ENST00000568494	SBSPON	Q8IVN8	264 aa		9.39	□□□□□ -0.91
ZNRF1-208	ENST00000568494	DGAT2L7P	Q6IED9	249 aa		9.39	□□□□□ -0.91
ZNRF1-208	ENST00000568494	KIR2DL5B	Q8NHK3	375 aa		9.39	□□□□□ -0.91
ZNRF1-208	ENST00000568494	PGPEP1	Q9NXJ5	209 aa		9.39	□□□□□ -0.91
ZNRF1-208	ENST00000568494	TINCR	A0A1B0GVN0	87 aa		9.38	□□□□□ -0.91
ZNRF1-208	ENST00000568494	SMIM9	A6NGZ8	99 aa		9.38	□□□□□ -0.91
ZNRF1-208	ENST00000568494	WFDC2	Q14508	124 aa		9.38	□□□□□ -0.91
ZNRF1-208	ENST00000568494	LINC00612	Q8N6U2	182 aa		9.38	□□□□□ -0.91
ZNRF1-208	ENST00000568494	SPANXB1	Q9NS25	103 aa	Predicted RBP	9.38	□□□□□ -0.91
ZNRF1-208	ENST00000568494	GTSF1L	Q9H1H1	148 aa		9.37	□□□□□ -0.91
ZNRF1-208	ENST00000568494	DEFB135	Q30KP9	77 aa		9.36	□□□□□ -0.91
ZNRF1-208	ENST00000568494	PRO0461	Q9UI25	63 aa		9.36	□□□□□ -0.91
ZNRF1-208	ENST00000568494	DNAH3	Q8TD57	4116 aa		9.36	□□□□□ -0.91
ZNRF1-208	ENST00000568494	TRAV8-3	A0A0A6YYJ7	113 aa		9.36	□□□□□ -0.91
ZNRF1-208	ENST00000568494	TMEM243	Q9BU79	118 aa		9.36	□□□□□ -0.91
ZNRF1-208	ENST00000568494	TSPAN13	O95857	204 aa		9.35	□□□□□ -0.91
ZNRF1-208	ENST00000568494	IGHV3-30	P01768	117 aa		9.35	□□□□□ -0.91
ZNRF1-208	ENST00000568494	IGHV3-30-3	P0DP02	117 aa		9.35	□□□□□ -0.91
ZNRF1-208	ENST00000568494	IGHV3-30-5	P0DP03	117 aa		9.35	□□□□□ -0.91
ZNRF1-208	ENST00000568494	APOC4	P55056	127 aa		9.35	□□□□□ -0.91
ZNRF1-208	ENST00000568494	CSDC2	Q9Y534	153 aa	Known RBP	9.35	□□□□□ -0.91
ZNRF1-208	ENST00000568494	SPINK8	P0C7L1	97 aa		9.34	□□□□□ -0.91
ZNRF1-208	ENST00000568494	TIRAP	P58753	221 aa		9.34	□□□□□ -0.91
ZNRF1-208	ENST00000568494	COX6A2	Q02221	97 aa		9.34	□□□□□ -0.91
ZNRF1-208	ENST00000568494	GEMIN7	Q9H840	131 aa	Known RBP	9.34	□□□□□ -0.91
ZNRF1-208	ENST00000568494	IGHV1-58	A0A0C4DH39	117 aa		9.34	□□□□□ -0.91
ZNRF1-208	ENST00000568494		J3QR89	54 aa		9.34	□□□□□ -0.91
ZNRF1-208	ENST00000568494	DEFB4A	O15263	64 aa		9.34	□□□□□ -0.91
ZNRF1-208	ENST00000568494	WIPF1	O43516	503 aa		9.34	□□□□□ -0.91
ZNRF1-208	ENST00000568494	APOM	O95445	188 aa		9.34	□□□□□ -0.91
ZNRF1-208	ENST00000568494	FAM222A	Q5U5X8	452 aa		9.34	□□□□□ -0.91
ZNRF1-208	ENST00000568494	CFAP161	Q6P656	301 aa		9.34	□□□□□ -0.91
ZNRF1-208	ENST00000568494	CDC42SE2	Q9NRR3	84 aa		9.34	□□□□□ -0.91
ZNRF1-208	ENST00000568494	UBE2L6	O14933	153 aa		9.33	□□□□□ -0.92
ZNRF1-208	ENST00000568494		A8MZ25	164 aa		9.32	□□□□□ -0.92
ZNRF1-208	ENST00000568494	ETDB	Q3ZM63	59 aa		9.32	□□□□□ -0.92
ZNRF1-208	ENST00000568494	OXLD1	Q5BKU9	147 aa		9.32	□□□□□ -0.92
ZNRF1-208	ENST00000568494	SH2D6	Q7Z4S9	175 aa		9.32	□□□□□ -0.92
ZNRF1-208	ENST00000568494	C10orf126	Q8N4M7	172 aa		9.32	□□□□□ -0.92
ZNRF1-208	ENST00000568494	VSIG2	Q96IQ7	327 aa		9.32	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms