RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 TIMM17AQ99595 171 aa1.95□□□□□ -2.1
HERPUD1-212ENST00000567944 TMEM243Q9BU79 118 aa1.95□□□□□ -2.1
HERPUD1-212ENST00000567944 U3KQA8 63 aa1.95□□□□□ -2.1
HERPUD1-212ENST00000567944 ZANQ9Y493 2812 aa1.95□□□□□ -2.1
HERPUD1-212ENST00000567944 MXRA5Q9NR99 2828 aa1.95□□□□□ -2.1
HERPUD1-212ENST00000567944 MED12Q93074 2177 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 MYMXA0A1B0GTQ4 84 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 hADV29S1A0JD25 119 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 A6NIN4 97 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 C8orf87E5RJ46 101 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 M0R129 80 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 COX7A2LO14548 114 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 PSPHP1O15172 72 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 SLC25A20O43772 301 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 TIMM17BO60830 172 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 PGLYRP1O75594 196 aaPredicted RBP1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 CPSF4O95639 269 aaKnown RBP1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 TCL1BO95988 128 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 INAFM2P0DMQ5 153 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 INSL3P51460 131 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 DYNLT3P51808 116 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 CAV3P56539 151 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 CIRBPQ14011 172 aaKnown RBP1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 ZNF56Q15929 161 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 KPRPQ5T749 579 aaPredicted RBP1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 PRR9Q5T870 116 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 ATP5EP2Q5VTU8 51 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 GUSBP11Q6P575 273 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 C2orf91Q6ZV80 131 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 PHF5AQ7RTV0 110 aaKnown RBP1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 DEFB119Q8N690 84 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 SLC25A29Q8N8R3 303 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 TMEM75Q8N9X5 138 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 ZNF563Q8TA94 476 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 CCL17Q92583 94 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 NHP2Q9NX24 153 aaKnown RBP1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 TIMM9Q9Y5J7 89 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 CHD3Q12873 2000 aaKnown RBP1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 ROS1P08922 2347 aa1.94□□□□□ -2.1
HERPUD1-212ENST00000567944 MGAM2Q2M2H8 2515 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 ZNF407Q9C0G0 2248 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 IGLV3-12A0A075B6K2 115 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 IGHV3OR15-7A0A075B7D8 119 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 TRAV41A0A0B4J266 112 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 A0A0B4J2C4 111 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 CTXND1A0A1B0GTU2 59 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 TCRBV4S1A1TA0A5B7 111 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 C2orf70A6NJV1 201 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 C17orf51A8MQB3 221 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 C9JCJ5 164 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 H3BVH4 76 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 C19orf84I3L1E1 186 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 J3QLW9 94 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 TMEM256-PLSCR3K7ERE1 68 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 M0R381 172 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 BPY2O14599 106 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 ZNF73O43830 326 aaPredicted RBP1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 SAA1P0DJI8 122 aaPredicted RBP1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 PEBP1P30086 187 aaKnown RBP1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 HIST1H4AP62805 103 aaKnown RBP1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 RBM3P98179 157 aaKnown RBP1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 RBMY1FQ15415 496 aaKnown RBP1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 FBXL19-AS1Q494R0 122 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 NCBP2-AS2Q69YL0 99 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 C7orf65Q6ZTY9 151 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 MDP1Q86V88 176 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 RPP25LQ8N5L8 163 aaKnown RBP1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 DSCR8Q96T75 97 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 HILPDAQ9Y5L2 63 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 S4R3C0 116 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 PKD1L1Q8TDX9 2849 aa1.93□□□□□ -2.1
HERPUD1-212ENST00000567944 FBN1P35555 2871 aaKnown RBP1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 WNK1Q9H4A3 2382 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 LOC107984156A0A0G2JMH3 177 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 TRBV10-2A0A0K0K1G8 114 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 M0R378 163 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 LST1O00453 97 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 NUPR1O60356 82 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 RNASE2P10153 161 aaKnown RBP1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 MGST1P10620 155 aaKnown RBP1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 FUSP35637 526 aaKnown RBP eCLIP1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 IFI27P40305 119 aaPredicted RBP1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 FXYD6P3P58550 94 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 UBE2D3P61077 147 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 UBE2D2P62837 147 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 CCL20P78556 96 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 INSL4Q14641 139 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 ASB16-AS1Q495Z4 193 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 MRPL51Q4U2R6 128 aaKnown RBP1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 DEFB121Q5J5C9 76 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 SPANXN1Q5VSR9 72 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 ATP11AUNQ6ZP68 121 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 SCXQ7RTU7 201 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 LINC00596Q86U02 117 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 ARL17AQ8IVW1 177 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 ZCCHC24Q8N2G6 241 aaKnown RBP1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 RPRMLQ8N4K4 120 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 ODF3Q96PU9 254 aa1.92□□□□□ -2.1
HERPUD1-212ENST00000567944 SPACA5Q96QH8 159 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms