RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 SLC25A29Q8N8R3 303 aa16.86■□□□□ 0.29
LINC00543-201ENST00000567234 TCL1BO95988 128 aa16.85■□□□□ 0.29
LINC00543-201ENST00000567234 PRM2P04554 102 aa16.85■□□□□ 0.29
LINC00543-201ENST00000567234 PRO1854Q9UHT4 67 aa16.85■□□□□ 0.29
LINC00543-201ENST00000567234 ATRQ13535 2644 aa16.85■□□□□ 0.29
LINC00543-201ENST00000567234 PRIMA1Q86XR5 153 aa16.84■□□□□ 0.29
LINC00543-201ENST00000567234 C11orf86A6NJI1 115 aa16.84■□□□□ 0.29
LINC00543-201ENST00000567234 RHOHQ15669 191 aa16.84■□□□□ 0.29
LINC00543-201ENST00000567234 MRPL23Q16540 153 aaKnown RBP16.84■□□□□ 0.29
LINC00543-201ENST00000567234 IGHV3-30P01768 117 aa16.83■□□□□ 0.28
LINC00543-201ENST00000567234 IGHV3-30-5P0DP03 117 aa16.83■□□□□ 0.28
LINC00543-201ENST00000567234 IL17DQ8TAD2 202 aa16.83■□□□□ 0.28
LINC00543-201ENST00000567234 KRTAP24-1Q3LI83 254 aa16.82■□□□□ 0.28
LINC00543-201ENST00000567234 ANKRD29Q8N6D5 301 aa16.82■□□□□ 0.28
LINC00543-201ENST00000567234 TIMM17AQ99595 171 aa16.82■□□□□ 0.28
LINC00543-201ENST00000567234 A0A0B4J2C4 111 aa16.81■□□□□ 0.28
LINC00543-201ENST00000567234 I3L3M4 83 aa16.8■□□□□ 0.28
LINC00543-201ENST00000567234 RS1O15537 224 aa16.8■□□□□ 0.28
LINC00543-201ENST00000567234 CFC1BP0CG36 223 aa16.8■□□□□ 0.28
LINC00543-201ENST00000567234 CFC1P0CG37 223 aa16.8■□□□□ 0.28
LINC00543-201ENST00000567234 RPL13AP40429 203 aaKnown RBP16.8■□□□□ 0.28
LINC00543-201ENST00000567234 GAGE2BQ13066 116 aa16.8■□□□□ 0.28
LINC00543-201ENST00000567234 PMVKQ15126 192 aa16.8■□□□□ 0.28
LINC00543-201ENST00000567234 GAGE2EQ4V326 116 aa16.8■□□□□ 0.28
LINC00543-201ENST00000567234 PLEKHB2Q96CS7 222 aa16.8■□□□□ 0.28
LINC00543-201ENST00000567234 GAGE2DQ9UEU5 116 aa16.8■□□□□ 0.28
LINC00543-201ENST00000567234 GIG44P09565 113 aaPredicted RBP16.8■□□□□ 0.28
LINC00543-201ENST00000567234 TMEM263Q8WUH6 116 aaKnown RBP16.8■□□□□ 0.28
LINC00543-201ENST00000567234 TP53TG1Q9Y2A0 90 aa16.8■□□□□ 0.28
LINC00543-201ENST00000567234 IGIPA6NJ69 53 aa16.79■□□□□ 0.28
LINC00543-201ENST00000567234 SLC25A20O43772 301 aa16.79■□□□□ 0.28
LINC00543-201ENST00000567234 SNCGO76070 127 aa16.78■□□□□ 0.28
LINC00543-201ENST00000567234 SPANXDQ9BXN6 97 aa16.78■□□□□ 0.28
LINC00543-201ENST00000567234 FBN1P35555 2871 aaKnown RBP16.78■□□□□ 0.28
LINC00543-201ENST00000567234 IGHV3OR16-12A0A075B7B8 117 aa16.77■□□□□ 0.28
LINC00543-201ENST00000567234 IGLV4-69A0A075B6H9 119 aa16.77■□□□□ 0.27
LINC00543-201ENST00000567234 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.77■□□□□ 0.27
LINC00543-201ENST00000567234 GAGE12JA6NER3 117 aa16.77■□□□□ 0.27
LINC00543-201ENST00000567234 GAGE7O76087 117 aa16.77■□□□□ 0.27
LINC00543-201ENST00000567234 TSHBP01222 138 aa16.77■□□□□ 0.27
LINC00543-201ENST00000567234 IGHV3-53P01767 116 aa16.77■□□□□ 0.27
LINC00543-201ENST00000567234 GAGE12FP0CL80 117 aa16.77■□□□□ 0.27
LINC00543-201ENST00000567234 GAGE12GP0CL81 117 aa16.77■□□□□ 0.27
LINC00543-201ENST00000567234 GAGE12IP0CL82 117 aa16.77■□□□□ 0.27
LINC00543-201ENST00000567234 GAGE4Q13068 117 aa16.77■□□□□ 0.27
LINC00543-201ENST00000567234 WFDC10AQ9H1F0 79 aa16.77■□□□□ 0.27
LINC00543-201ENST00000567234 IGHV3-73A0A0B4J1V6 119 aa16.76■□□□□ 0.27
LINC00543-201ENST00000567234 DNAJC30Q96LL9 226 aa16.76■□□□□ 0.27
LINC00543-201ENST00000567234 NDUFV3P56181 108 aaKnown RBP16.75■□□□□ 0.27
LINC00543-201ENST00000567234 TNFRSF18Q9Y5U5 241 aa16.75■□□□□ 0.27
LINC00543-201ENST00000567234 C9orf66Q5T8R8 295 aa16.75■□□□□ 0.27
LINC00543-201ENST00000567234 RPL35AP18077 110 aaKnown RBP16.74■□□□□ 0.27
LINC00543-201ENST00000567234 ATXN8Q156A1 80 aa16.74■□□□□ 0.27
LINC00543-201ENST00000567234 CSNK1G2-AS1Q8NCQ2 148 aa16.74■□□□□ 0.27
LINC00543-201ENST00000567234 RPL39P62891 51 aaKnown RBP16.73■□□□□ 0.27
LINC00543-201ENST00000567234 DAZ2Q13117 558 aaKnown RBP16.73■□□□□ 0.27
LINC00543-201ENST00000567234 NHLRC4P0CG21 123 aaPredicted RBP16.73■□□□□ 0.27
LINC00543-201ENST00000567234 IFITM1P13164 125 aa16.73■□□□□ 0.27
LINC00543-201ENST00000567234 C20orf203Q8NBC4 194 aa16.73■□□□□ 0.27
LINC00543-201ENST00000567234 C16orf74Q96GX8 76 aa16.73■□□□□ 0.27
LINC00543-201ENST00000567234 IGHV3-33P01772 117 aa16.72■□□□□ 0.27
LINC00543-201ENST00000567234 Q6ZSN1 163 aa16.72■□□□□ 0.27
LINC00543-201ENST00000567234 TTC32Q5I0X7 151 aa16.71■□□□□ 0.27
LINC00543-201ENST00000567234 AMELXQ99217 191 aa16.71■□□□□ 0.27
LINC00543-201ENST00000567234 TRGV1A0A0A0MS02 117 aa16.7■□□□□ 0.26
LINC00543-201ENST00000567234 FAM240AA0A1B0GVK7 77 aa16.7■□□□□ 0.26
LINC00543-201ENST00000567234 LGALS3P17931 250 aaKnown RBP16.7■□□□□ 0.26
LINC00543-201ENST00000567234 CFAP161Q6P656 301 aa16.7■□□□□ 0.26
LINC00543-201ENST00000567234 J3QQQ9 107 aa16.69■□□□□ 0.26
LINC00543-201ENST00000567234 LEPROTO15243 131 aa16.69■□□□□ 0.26
LINC00543-201ENST00000567234 TRBV30A0A0K0K1B3 111 aa16.68■□□□□ 0.26
LINC00543-201ENST00000567234 DEFB104AQ8WTQ1 72 aa16.68■□□□□ 0.26
LINC00543-201ENST00000567234 SS18L2Q9UHA2 77 aa16.68■□□□□ 0.26
LINC00543-201ENST00000567234 TRAV4A0A0B4J268 109 aa16.68■□□□□ 0.26
LINC00543-201ENST00000567234 TRBV10-2A0A0K0K1G8 114 aa16.68■□□□□ 0.26
LINC00543-201ENST00000567234 C9JAW5 83 aa16.68■□□□□ 0.26
LINC00543-201ENST00000567234 VWFP04275 2813 aa16.67■□□□□ 0.26
LINC00543-201ENST00000567234 PLAC8L1A1L4L8 177 aa16.66■□□□□ 0.26
LINC00543-201ENST00000567234 OVOL2Q9BRP0 275 aa16.66■□□□□ 0.26
LINC00543-201ENST00000567234 PYGO1Q9Y3Y4 419 aa16.66■□□□□ 0.26
LINC00543-201ENST00000567234 B5MCH6 92 aa16.66■□□□□ 0.26
LINC00543-201ENST00000567234 LINC01620Q4KN68 170 aa16.66■□□□□ 0.26
LINC00543-201ENST00000567234 Q6ZTI0 123 aa16.66■□□□□ 0.26
LINC00543-201ENST00000567234 SPATA3Q8NHX4 192 aa16.66■□□□□ 0.26
LINC00543-201ENST00000567234 H3BT86 120 aa16.65■□□□□ 0.26
LINC00543-201ENST00000567234 NOP10Q9NPE3 64 aaKnown RBP16.65■□□□□ 0.26
LINC00543-201ENST00000567234 NOTCH3Q9UM47 2321 aa16.65■□□□□ 0.26
LINC00543-201ENST00000567234 TRAV8-4A0A0B4J246 113 aa16.64■□□□□ 0.25
LINC00543-201ENST00000567234 TRBV10-1A0A0K0K1A3 114 aa16.64■□□□□ 0.25
LINC00543-201ENST00000567234 STAB1Q9NY15 2570 aa16.64■□□□□ 0.25
LINC00543-201ENST00000567234 Q9UF83 564 aa16.63■□□□□ 0.25
LINC00543-201ENST00000567234 A4D1N5 150 aa16.63■□□□□ 0.25
LINC00543-201ENST00000567234 TSPEAR-AS2P59090 65 aa16.61■□□□□ 0.25
LINC00543-201ENST00000567234 DEFB121Q5J5C9 76 aa16.61■□□□□ 0.25
LINC00543-201ENST00000567234 SFTA2Q6UW10 78 aa16.61■□□□□ 0.25
LINC00543-201ENST00000567234 TMEM223A0PJW6 202 aa16.61■□□□□ 0.25
LINC00543-201ENST00000567234 TMEM170BQ5T4T1 132 aa16.61■□□□□ 0.25
LINC00543-201ENST00000567234 WFDC9Q8NEX5 89 aa16.6■□□□□ 0.25
LINC00543-201ENST00000567234 NTN5Q8WTR8 489 aaPredicted RBP16.6■□□□□ 0.25
LINC00543-201ENST00000567234 UBE2WQ96B02 151 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms