RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 GAGE1Q13065 139 aa6.3□□□□□ -1.4
CAPN3-216ENST00000567071 GAGE4Q13068 117 aa6.3□□□□□ -1.4
CAPN3-216ENST00000567071 GAGE5Q13069 117 aa6.3□□□□□ -1.4
CAPN3-216ENST00000567071 WFDC2Q14508 124 aa6.3□□□□□ -1.4
CAPN3-216ENST00000567071 GAGE13Q4V321 117 aa6.3□□□□□ -1.4
CAPN3-216ENST00000567071 NEXN-AS1Q8NBZ9 246 aa6.3□□□□□ -1.4
CAPN3-216ENST00000567071 C18orf32Q8TCD1 76 aa6.3□□□□□ -1.4
CAPN3-216ENST00000567071 HIST1H2BKO60814 126 aa6.29□□□□□ -1.4
CAPN3-216ENST00000567071 HIST1H2BJP06899 126 aa6.29□□□□□ -1.4
CAPN3-216ENST00000567071 HIST1H2BOP23527 126 aa6.29□□□□□ -1.4
CAPN3-216ENST00000567071 HIST1H2BBP33778 126 aa6.29□□□□□ -1.4
CAPN3-216ENST00000567071 HIST1H2BDP58876 126 aa6.29□□□□□ -1.4
CAPN3-216ENST00000567071 SUMO2P61956 95 aaKnown RBP6.29□□□□□ -1.4
CAPN3-216ENST00000567071 HIST1H2BCP62807 126 aa6.29□□□□□ -1.4
CAPN3-216ENST00000567071 HIST2H2BEQ16778 126 aa6.29□□□□□ -1.4
CAPN3-216ENST00000567071 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.29□□□□□ -1.4
CAPN3-216ENST00000567071 HIST1H2BHQ93079 126 aa6.29□□□□□ -1.4
CAPN3-216ENST00000567071 HIST1H2BNQ99877 126 aa6.29□□□□□ -1.4
CAPN3-216ENST00000567071 HIST1H2BMQ99879 126 aa6.29□□□□□ -1.4
CAPN3-216ENST00000567071 PRADC1Q9BSG0 188 aa6.29□□□□□ -1.4
CAPN3-216ENST00000567071 MAP1LC3AQ9H492 121 aa6.29□□□□□ -1.4
CAPN3-216ENST00000567071 ST20Q9HBF5 79 aa6.29□□□□□ -1.4
CAPN3-216ENST00000567071 NIT2Q9NQR4 276 aa6.29□□□□□ -1.4
CAPN3-216ENST00000567071 TMA7Q9Y2S6 64 aaKnown RBP6.29□□□□□ -1.4
CAPN3-216ENST00000567071 TRBV10-1A0A0K0K1A3 114 aa6.28□□□□□ -1.4
CAPN3-216ENST00000567071 SDHAF1A6NFY7 115 aa6.28□□□□□ -1.4
CAPN3-216ENST00000567071 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-216ENST00000567071 PPP1R17O96001 155 aa6.28□□□□□ -1.4
CAPN3-216ENST00000567071 RAB5BP61020 215 aa6.28□□□□□ -1.4
CAPN3-216ENST00000567071 RPL36AP83881 106 aaKnown RBP6.28□□□□□ -1.4
CAPN3-216ENST00000567071 LINC01556Q5JQF7 62 aa6.28□□□□□ -1.4
CAPN3-216ENST00000567071 Q8N976 141 aa6.28□□□□□ -1.4
CAPN3-216ENST00000567071 RPL36ALQ969Q0 106 aaKnown RBP6.28□□□□□ -1.4
CAPN3-216ENST00000567071 SMIM2Q9BVW6 85 aa6.28□□□□□ -1.4
CAPN3-216ENST00000567071 LAMTOR2Q9Y2Q5 125 aa6.28□□□□□ -1.4
CAPN3-216ENST00000567071 TRBV7-3A0A075B6L6 115 aa6.27□□□□□ -1.41
CAPN3-216ENST00000567071 TRBV6-5A0A0K0K1A5 114 aa6.27□□□□□ -1.41
CAPN3-216ENST00000567071 LINC00694P0DN24 101 aa6.27□□□□□ -1.41
CAPN3-216ENST00000567071 PMCHP20382 165 aa6.27□□□□□ -1.41
CAPN3-216ENST00000567071 IFI27P40305 119 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-216ENST00000567071 UBE2D3P61077 147 aa6.27□□□□□ -1.41
CAPN3-216ENST00000567071 UBE2D2P62837 147 aa6.27□□□□□ -1.41
CAPN3-216ENST00000567071 LAGE3Q14657 143 aa6.27□□□□□ -1.41
CAPN3-216ENST00000567071 RNASEKQ6P5S7 137 aaKnown RBP6.27□□□□□ -1.41
CAPN3-216ENST00000567071 BAGE3Q86Y29 109 aa6.27□□□□□ -1.41
CAPN3-216ENST00000567071 DNAJC30Q96LL9 226 aa6.27□□□□□ -1.41
CAPN3-216ENST00000567071 C20orf78Q9BR46 151 aa6.27□□□□□ -1.41
CAPN3-216ENST00000567071 A0A0J9YXV3 536 aa6.26□□□□□ -1.41
CAPN3-216ENST00000567071 NDUFA6P56556 154 aa6.26□□□□□ -1.41
CAPN3-216ENST00000567071 Q8N8P6 123 aa6.26□□□□□ -1.41
CAPN3-216ENST00000567071 PRSS3P2Q8NHM4 247 aa6.26□□□□□ -1.41
CAPN3-216ENST00000567071 TRAV8-6A0A0B4J262 113 aa6.25□□□□□ -1.41
CAPN3-216ENST00000567071 I3L3M4 83 aa6.25□□□□□ -1.41
CAPN3-216ENST00000567071 TCAPO15273 167 aa6.25□□□□□ -1.41
CAPN3-216ENST00000567071 SERF1AO75920 110 aa6.25□□□□□ -1.41
CAPN3-216ENST00000567071 POLR2KP53803 58 aaKnown RBP6.25□□□□□ -1.41
CAPN3-216ENST00000567071 Q0VG73 95 aa6.25□□□□□ -1.41
CAPN3-216ENST00000567071 FA2HQ7L5A8 372 aa6.25□□□□□ -1.41
CAPN3-216ENST00000567071 ATP6V0E2Q8NHE4 81 aa6.25□□□□□ -1.41
CAPN3-216ENST00000567071 URB1-AS1Q96HZ7 61 aa6.25□□□□□ -1.41
CAPN3-216ENST00000567071 COX11Q9Y6N1 276 aa6.25□□□□□ -1.41
CAPN3-216ENST00000567071 TRAV8-3A0A0A6YYJ7 113 aa6.24□□□□□ -1.41
CAPN3-216ENST00000567071 TRBV27A0A0K0K1C4 114 aa6.24□□□□□ -1.41
CAPN3-216ENST00000567071 PANO1I0J062 215 aa6.24□□□□□ -1.41
CAPN3-216ENST00000567071 VCYO14598 125 aa6.24□□□□□ -1.41
CAPN3-216ENST00000567071 TSHBP01222 138 aa6.24□□□□□ -1.41
CAPN3-216ENST00000567071 LINC00310P59036 64 aa6.24□□□□□ -1.41
CAPN3-216ENST00000567071 RPL32P62910 135 aaKnown RBP6.24□□□□□ -1.41
CAPN3-216ENST00000567071 SH2D6Q7Z4S9 175 aa6.24□□□□□ -1.41
CAPN3-216ENST00000567071 NIT1Q86X76 327 aa6.24□□□□□ -1.41
CAPN3-216ENST00000567071 BAALCQ8WXS3 180 aa6.24□□□□□ -1.41
CAPN3-216ENST00000567071 NXT2Q9NPJ8 142 aaKnown RBP6.24□□□□□ -1.41
CAPN3-216ENST00000567071 PRSS47A8MTI9 375 aa6.23□□□□□ -1.41
CAPN3-216ENST00000567071 NUPR1O60356 82 aa6.23□□□□□ -1.41
CAPN3-216ENST00000567071 IGHV3-30P01768 117 aa6.23□□□□□ -1.41
CAPN3-216ENST00000567071 IGHV3-33P01772 117 aa6.23□□□□□ -1.41
CAPN3-216ENST00000567071 IGHV3-30-3P0DP02 117 aa6.23□□□□□ -1.41
CAPN3-216ENST00000567071 IGHV3-30-5P0DP03 117 aa6.23□□□□□ -1.41
CAPN3-216ENST00000567071 FCER1GP30273 86 aa6.23□□□□□ -1.41
CAPN3-216ENST00000567071 COTL1Q14019 142 aa6.23□□□□□ -1.41
CAPN3-216ENST00000567071 PMCHL1Q16048 86 aa6.23□□□□□ -1.41
CAPN3-216ENST00000567071 REG3GQ6UW15 175 aa6.23□□□□□ -1.41
CAPN3-216ENST00000567071 DAZ4Q86SG3 579 aaKnown RBP6.23□□□□□ -1.41
CAPN3-216ENST00000567071 KIR2DL4Q99706 377 aa6.23□□□□□ -1.41
CAPN3-216ENST00000567071 DAZ3Q9NR90 486 aaKnown RBP6.23□□□□□ -1.41
CAPN3-216ENST00000567071 AP5S1Q9NUS5 200 aa6.23□□□□□ -1.41
CAPN3-216ENST00000567071 HSBP1O75506 76 aa6.22□□□□□ -1.41
CAPN3-216ENST00000567071 S100A6P06703 90 aa6.22□□□□□ -1.41
CAPN3-216ENST00000567071 LINC00614P0C842 121 aa6.22□□□□□ -1.41
CAPN3-216ENST00000567071 AMTP48728 403 aa6.22□□□□□ -1.41
CAPN3-216ENST00000567071 KRTAP10-8P60410 259 aa6.22□□□□□ -1.41
CAPN3-216ENST00000567071 PDZD11Q5EBL8 140 aa6.22□□□□□ -1.41
CAPN3-216ENST00000567071 NTM-AS1Q6ZSK4 140 aa6.22□□□□□ -1.41
CAPN3-216ENST00000567071 RMI2Q96E14 147 aa6.22□□□□□ -1.41
CAPN3-216ENST00000567071 C14orf177Q52M58 125 aa6.21□□□□□ -1.42
CAPN3-216ENST00000567071 COA6Q5JTJ3 125 aaKnown RBP6.21□□□□□ -1.42
CAPN3-216ENST00000567071 FAM19A2Q8N3H0 131 aa6.21□□□□□ -1.42
CAPN3-216ENST00000567071 CHCHD1Q96BP2 118 aaKnown RBP6.21□□□□□ -1.42
CAPN3-216ENST00000567071 GTSF1LQ9H1H1 148 aa6.21□□□□□ -1.42
CAPN3-216ENST00000567071 TRBV25-1A0A075B6N4 114 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms